Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_C12
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 36 0.019
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 35 0.045
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.14
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.18
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.18
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.18
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.32
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.32
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.32
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.32
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.42
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.42
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 2.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.9
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 29 3.9
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 29 3.9
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 5.1
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 28 6.8
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 28 6.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 27 9.0
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 27 9.0
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 27 9.0
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 27 9.0
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = +1
Query: 484 GGXXXPPPPPPXGGGXXXXXPXXXXXXXXXXPPXXXFXGGGGXXXKXXXXGGGGG 648
GG PPPPPP GGG P P GGG GG GG
Sbjct: 26 GGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAPI-----GGGYAQPGGGYGGAGG 75
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 35.1 bits (77), Expect = 0.045
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +1
Query: 484 GGXXXPPPPPPXGGGXXXXXPXXXXXXXXXXPPXXXFXGGGGXXXKXXXXGGGGG 648
GG PPPPP GGG GGGG GGGGG
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 104
Score = 35.1 bits (77), Expect = 0.045
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +1
Query: 484 GGXXXPPPPPPXGGGXXXXXPXXXXXXXXXXPPXXXFXGGGGXXXKXXXXGGGGG 648
GG PPPPP GGG GGGG GGGGG
Sbjct: 107 GGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGG 161
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 609 PPPPXKXXXGGXXXGXXXXXXGGXXXXPPPXGGGGXGXG 493
PPPP G G GG GGGG G G
Sbjct: 55 PPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCG 93
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPPXKXXXGGXXXXXXXXXXGXXXXXPPPXG--GGGGGXXXPP 483
PPPP F PPP G G PPP GG GG PP
Sbjct: 742 PPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPP 798
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Frame = +1
Query: 499 PPPPPPXGGGXXXXXPXXXXXXXXXXPPXXXFXGG----GGXXXKXXXXGGGGG 648
PPPP G G P PP F GG GG GGGG
Sbjct: 756 PPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGG 809
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Frame = +2
Query: 485 GGXPXPXPP---PPXGGG-XXXXPPXXXXXXPXXXPPXXXFXGG 604
GG P P PP PP GG PP P PP F GG
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 485 GGXPXPXPPPPXGGGXXXXPP 547
GG P P PPPP GG PP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPP 786
Score = 30.7 bits (66), Expect = 0.96
Identities = 27/103 (26%), Positives = 28/103 (27%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPPXKXXXGGXXXXXXXXXXGXXXXXPPPXGGGGGGXXXPPXXKKX 468
PPPPP PPPP GG PP GG PP
Sbjct: 713 PPPPPGLPPITGGPPPP--PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 467 KKKXPPXFFFXXKKXXXPXXKTPXXKGGVGAPXPPXXXKKKXP 339
PP F K P P + P KK P
Sbjct: 771 PPPPPPPGGF---KGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 645 PPPPPXXXFXXXPPPP 598
PPPPP F PPPP
Sbjct: 772 PPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = -2
Query: 645 PPPPPXXXFXXXP--PPPXKXXXGGXXXGXXXXXXGGXXXXPPP 520
PPPPP PPP GG GG PPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +2
Query: 485 GGXPXPXPP---PPXGGGXXXXPPXXXXXXPXXXPPXXXFXGGG 607
GG P P PP PP GG PP PP GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 488 GXPXPXPPPPXGGGXXXXPPXXXXXXPXXXPP 583
G P P PPPP G PP PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Frame = +2
Query: 485 GGXPXPXPP---PPXGGG-XXXXPPXXXXXXPXXXPPXXXFXGG 604
GG P P PP PP GG PP P PP F GG
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 485 GGXPXPXPPPPXGGGXXXXPP 547
GG P P PPPP GG PP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPP 786
Score = 30.7 bits (66), Expect = 0.96
Identities = 27/103 (26%), Positives = 28/103 (27%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPPXKXXXGGXXXXXXXXXXGXXXXXPPPXGGGGGGXXXPPXXKKX 468
PPPPP PPPP GG PP GG PP
Sbjct: 713 PPPPPGLPPITGGPPPP--PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 467 KKKXPPXFFFXXKKXXXPXXKTPXXKGGVGAPXPPXXXKKKXP 339
PP F K P P + P KK P
Sbjct: 771 PPPPPPPGGF---KGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 645 PPPPPXXXFXXXPPPP 598
PPPPP F PPPP
Sbjct: 772 PPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = -2
Query: 645 PPPPPXXXFXXXP--PPPXKXXXGGXXXGXXXXXXGGXXXXPPP 520
PPPPP PPP GG GG PPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +2
Query: 485 GGXPXPXPP---PPXGGGXXXXPPXXXXXXPXXXPPXXXFXGGG 607
GG P P PP PP GG PP PP GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 488 GXPXPXPPPPXGGGXXXXPPXXXXXXPXXXPP 583
G P P PPPP G PP PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Frame = +2
Query: 485 GGXPXPXPP---PPXGGG-XXXXPPXXXXXXPXXXPPXXXFXGG 604
GG P P PP PP GG PP P PP F GG
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 485 GGXPXPXPPPPXGGGXXXXPP 547
GG P P PPPP GG PP
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPP 369
Score = 30.7 bits (66), Expect = 0.96
Identities = 27/103 (26%), Positives = 28/103 (27%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPPXKXXXGGXXXXXXXXXXGXXXXXPPPXGGGGGGXXXPPXXKKX 468
PPPPP PPPP GG PP GG PP
Sbjct: 296 PPPPPGLPPITGGPPPP--PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 467 KKKXPPXFFFXXKKXXXPXXKTPXXKGGVGAPXPPXXXKKKXP 339
PP F K P P + P KK P
Sbjct: 354 PPPPPPPGGF---KGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 393
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 645 PPPPPXXXFXXXPPPP 598
PPPPP F PPPP
Sbjct: 355 PPPPPPGGFKGGPPPP 370
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = -2
Query: 645 PPPPPXXXFXXXP--PPPXKXXXGGXXXGXXXXXXGGXXXXPPP 520
PPPPP PPP GG GG PPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +2
Query: 485 GGXPXPXPP---PPXGGGXXXXPPXXXXXXPXXXPPXXXFXGGG 607
GG P P PP PP GG PP PP GG
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 488 GXPXPXPPPPXGGGXXXXPPXXXXXXPXXXPP 583
G P P PPPP G PP PP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.32
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = +1
Query: 484 GGXXXPPPPPPXGGGXXXXXPXXXXXXXXXXPPXXXFXG----GGGXXXKXXXXGGGGG 648
GG PPP P GGG PP G GGG GGGGG
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGG 102
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 484 GGXXXPPPPPPXGGGXXXXXPXXXXXXXXXXPPXXXFXGGGGXXXKXXXXGGGGG 648
GG PPP P GGG GGGG GGGGG
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 603 PPXKXXXGGXXXGXXXXXXGGXXXXPPPXGGGGXGXG 493
PP GG G GG PP GGG G G
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGG 86
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 606 PPPXKXXXGGXXXGXXXXXXGGXXXXPPPXGGGGXGXG 493
PPP G G GG P P GGG G G
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGG 87
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 567 PXXPPPXXFXXGGGGXXKKXXXGGGGG 647
P PPP GG + GGGGG
Sbjct: 307 PPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.32
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = +1
Query: 484 GGXXXPPPPPPXGGGXXXXXPXXXXXXXXXXPPXXXFXG----GGGXXXKXXXXGGGGG 648
GG PPP P GGG PP G GGG GGGGG
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGG 102
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 484 GGXXXPPPPPPXGGGXXXXXPXXXXXXXXXXPPXXXFXGGGGXXXKXXXXGGGGG 648
GG PPP P GGG GGGG GGGGG
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 603 PPXKXXXGGXXXGXXXXXXGGXXXXPPPXGGGGXGXG 493
PP GG G GG PP GGG G G
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGG 86
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 606 PPPXKXXXGGXXXGXXXXXXGGXXXXPPPXGGGGXGXG 493
PPP G G GG P P GGG G G
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGG 87
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 567 PXXPPPXXFXXGGGGXXKKXXXGGGGG 647
P PPP GG + GGGGG
Sbjct: 307 PPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.32
Identities = 24/103 (23%), Positives = 27/103 (26%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPPXKXXXGGXXXXXXXXXXGXXXXXPPPXGGGGGGXXXPPXXKKX 468
PPPP PP G PPP GG PP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS--PPPPRAGSP 297
Query: 467 KKKXPPXFFFXXKKXXXPXXKTPXXKGGVGAPXPPXXXKKKXP 339
PP P G G+P PP K++ P
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 340
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Frame = +2
Query: 485 GGXPXPXP---PPPXGGGXXXXPPXXXXXXPXXXPPXXXFXGGGGXXXKXXXGGGG 643
G P P PPP G G PP P PP G + GG G
Sbjct: 310 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPG 365
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -2
Query: 642 PPPPXXXFXXXPPPPXKXXXGGXXXGXXXXXXGGXXXXPPPXGGGGXGXGXPP 484
PPPP PPPP G G PPP G PP
Sbjct: 264 PPPPRTG--SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 23.0 bits (47), Expect(2) = 9.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 499 PPPPPPXG 522
PPPPPP G
Sbjct: 238 PPPPPPKG 245
Score = 22.6 bits (46), Expect(2) = 9.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 502 PPPPPXGG 525
PPPPP GG
Sbjct: 280 PPPPPAGG 287
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.32
Identities = 24/103 (23%), Positives = 27/103 (26%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPPXKXXXGGXXXXXXXXXXGXXXXXPPPXGGGGGGXXXPPXXKKX 468
PPPP PP G PPP GG PP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS--PPPPRAGSP 318
Query: 467 KKKXPPXFFFXXKKXXXPXXKTPXXKGGVGAPXPPXXXKKKXP 339
PP P G G+P PP K++ P
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 361
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Frame = +2
Query: 485 GGXPXPXP---PPPXGGGXXXXPPXXXXXXPXXXPPXXXFXGGGGXXXKXXXGGGG 643
G P P PPP G G PP P PP G + GG G
Sbjct: 331 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPG 386
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -2
Query: 642 PPPPXXXFXXXPPPPXKXXXGGXXXGXXXXXXGGXXXXPPPXGGGGXGXGXPP 484
PPPP PPPP G G PPP G PP
Sbjct: 285 PPPPRTG--SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 23.0 bits (47), Expect(2) = 9.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 499 PPPPPPXG 522
PPPPPP G
Sbjct: 259 PPPPPPKG 266
Score = 22.6 bits (46), Expect(2) = 9.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 502 PPPPPXGG 525
PPPPP GG
Sbjct: 301 PPPPPAGG 308
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.32
Identities = 24/103 (23%), Positives = 27/103 (26%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPPXKXXXGGXXXXXXXXXXGXXXXXPPPXGGGGGGXXXPPXXKKX 468
PPPP PP G PPP GG PP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS--PPPPRAGSP 303
Query: 467 KKKXPPXFFFXXKKXXXPXXKTPXXKGGVGAPXPPXXXKKKXP 339
PP P G G+P PP K++ P
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 346
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Frame = +2
Query: 485 GGXPXPXP---PPPXGGGXXXXPPXXXXXXPXXXPPXXXFXGGGGXXXKXXXGGGG 643
G P P PPP G G PP P PP G + GG G
Sbjct: 316 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPG 371
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -2
Query: 642 PPPPXXXFXXXPPPPXKXXXGGXXXGXXXXXXGGXXXXPPPXGGGGXGXGXPP 484
PPPP PPPP G G PPP G PP
Sbjct: 270 PPPPRTG--SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 23.0 bits (47), Expect(2) = 9.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 499 PPPPPPXG 522
PPPPPP G
Sbjct: 244 PPPPPPKG 251
Score = 22.6 bits (46), Expect(2) = 9.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 502 PPPPPXGG 525
PPPPP GG
Sbjct: 286 PPPPPAGG 293
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.42
Identities = 25/95 (26%), Positives = 29/95 (30%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPPXKXXXGGXXXXXXXXXXGXXXXXPPPXGGGGGGXXXPPXXKKX 468
PPPPP + PPPP G G PPP G PP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPG---------PPGMPGMPPPPPPSRFG----PPGMGGM 333
Query: 467 KKKXPPXFFFXXKKXXXPXXKTPXXKGGVGAPXPP 363
PP + P + P G+ P PP
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.42
Identities = 25/95 (26%), Positives = 29/95 (30%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPPXKXXXGGXXXXXXXXXXGXXXXXPPPXGGGGGGXXXPPXXKKX 468
PPPPP + PPPP G G PPP G PP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPG---------PPGMPGMPPPPPPSRFG----PPGMGGM 343
Query: 467 KKKXPPXFFFXXKKXXXPXXKTPXXKGGVGAPXPP 363
PP + P + P G+ P PP
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 31.1 bits (67), Expect = 0.73
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 494 PXPXPPPPXGGGXXXXPP 547
P P PPPP GGG PP
Sbjct: 39 PPPPPPPPCGGGYEAPPP 56
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPPXKXXXGG 576
PPPPP + PPPP GG
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAGG 65
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 646 PPPPPXXXFXXXPPPPXKXXXGGG 575
PPPPP PPPP GG
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAGG 65
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPPXKXXXGG 576
PPPPP PPPP GG
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPPXKXXXGG 576
PPPPP PPPP GG
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPGG 818
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 484 GGXXXPPPPPPXGGG 528
G PPPPPP GGG
Sbjct: 207 GSGRFPPPPPPYGGG 221
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 485 GGXPXPXPPPPXGGGXXXXPP 547
G P P PPPP GG PP
Sbjct: 574 GAPPPPPPPPPMLGGPPPPPP 594
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 646 PPPPPXXXFXXXPPPPXKXXXG 581
PPPPP PPPP G
Sbjct: 577 PPPPPPPPMLGGPPPPPPPPGG 598
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 487 GXXXPPPPPPXGGGXXXXXPXXXXXXXXXXPPXXXFXGGG 606
G PPPPPP G G P F GGG
Sbjct: 28 GCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGG 67
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 494 PXPXPPPPXGGGXXXXPPXXXXXXPXXXPPXXXFXGGG 607
P PPPP G G PP PP G G
Sbjct: 36 PYGAPPPPVGAGVGYAPPPPRPYGATYAPPPPMGIGAG 73
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 6/63 (9%)
Frame = -2
Query: 654 FXXPPPPPXXXFXXXPPPPXKXXXGGXXX-----GXXXXXXG-GXXXXPPPXGGGGXGXG 493
F PPPP PPP G G G G PPP G G G
Sbjct: 364 FGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSY 423
Query: 492 XPP 484
PP
Sbjct: 424 GPP 426
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 642 PPPPXXXFXXXPPPPXKXXXGGXXXGXXXXXXGGXXXXPPPXGGGGXGXGXPPXXKKXKK 463
P P PPPP G G GG PP GG G PP
Sbjct: 400 PQGPGGPGGYGPPPPG----GPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVG 455
Query: 462 KXPP 451
PP
Sbjct: 456 APPP 459
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPP 597
PPPPP FF PPP
Sbjct: 1015 PPPPPPADFFANIAPPP 1031
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 647 PPPPPXXXFFXXXPPPP 597
PPPPP FF PPP
Sbjct: 254 PPPPPPADFFANIAPPP 270
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 645 PPPPPXXXFXXXPPPP 598
PPPPP + PPPP
Sbjct: 95 PPPPPPHYYTQPPPPP 110
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1
Query: 499 PPPPPPXGGG 528
PPPPPP GGG
Sbjct: 64 PPPPPPCGGG 73
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 484 GGXXXPPPPPPXGGG 528
GG PPPPPP GG
Sbjct: 40 GGCCAPPPPPPVCGG 54
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 645 PPPPPXXXFXXXPPPPXKXXXGGXXXGXXXXXXGGXXXXPPPXGGG 508
PPPPP PPPP GG G PPP G G
Sbjct: 84 PPPPPMFAGGIPPPPP---MMGGIP--PPPPMFGAPPPPPPPSGLG 124
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +1
Query: 484 GGXXXPPPPPPXGGGXXXXXPXXXXXXXXXXPPXXXFXGGGGXXXKXXXXGGGGG 648
GG PPP P GGG P GGG + GG GG
Sbjct: 63 GGGCCPPPAPACGGGCGGGVAPAPIGGGYAQAPQAPI-GGGYAAPQAPIGGGYGG 116
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = -3
Query: 527 PP--PXGGGGGGXXXPPXXKKXKKK 459
PP P GGGGGG PP K K
Sbjct: 627 PPRGPGGGGGGGPTGPPAPPKPPAK 651
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = -3
Query: 527 PP--PXGGGGGGXXXPPXXKKXKKK 459
PP P GGGGGG PP K K
Sbjct: 627 PPRGPGGGGGGGPTGPPAPPKPPAK 651
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,125,175
Number of Sequences: 27780
Number of extensions: 298679
Number of successful extensions: 3359
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1913
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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