Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_C11
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical pr... 263 8e-71
Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical pr... 263 8e-71
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 263 8e-71
Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical pr... 263 8e-71
AC024810-11|AAK68516.2| 165|Caenorhabditis elegans Hypothetical... 32 0.39
AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical... 32 0.51
L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncog... 31 0.90
AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isofor... 31 0.90
AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isofor... 31 0.90
AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein. 31 0.90
AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell... 31 0.90
AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell... 31 0.90
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 30 1.6
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 30 1.6
U13642-5|AAG00036.1| 169|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81128-4|CAB03403.1| 898|Caenorhabditis elegans Hypothetical pr... 29 3.6
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.6
U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase... 29 3.6
U10333-1|AAA50224.1| 859|Caenorhabditis elegans RNA polymerase ... 29 3.6
Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL132948-46|CAD31837.2| 473|Caenorhabditis elegans Hypothetical... 29 4.8
AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CT... 29 4.8
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 6.3
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 28 8.4
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 28 8.4
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 28 8.4
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 8.4
U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical pr... 28 8.4
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 8.4
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 28 8.4
>Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical
protein C47E12.4d protein.
Length = 292
Score = 263 bits (645), Expect = 8e-71
Identities = 119/204 (58%), Positives = 148/204 (72%)
Frame = -3
Query: 750 NVFXXCGXXWNYGALPQTWENXNHVDPDTGARGDNDPVDVIEIGERVASRGDVYPVKILG 571
N+F G WNYGALPQTWE+ NHV PDTGA+GDNDP+DVIE+G +VA RG V VK+LG
Sbjct: 91 NIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPIDVIEVGSKVAGRGAVLQVKVLG 150
Query: 570 TLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPGLLRATVEWFRLYKVPDGKPVN 391
TLALIDEGETDWKL+AID D NA+KLND+ DVE ++PGLL A+VEWFR YK+P GKP N
Sbjct: 151 TLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPGLLAASVEWFRNYKIPAGKPAN 210
Query: 390 KFAFDGEAKNAEFAYKVVDEVHEFWKSLISGNVPDATDINKMNVSVSGSVDRAERSEAAA 211
+FAF+GE KN E+A KV+DE +E+WK+LI P ++++ +V D A AA
Sbjct: 211 EFAFNGEFKNREYAEKVIDETNEYWKTLIKEANPSLNTVSRVPEAVHQGTDEA----AAT 266
Query: 210 VLAKAPTLGQPAAIPQTVDKWHFL 139
+ P G A +P VDKWHF+
Sbjct: 267 AIGATPEHGANAPLPGDVDKWHFV 290
>Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical
protein C47E12.4c protein.
Length = 406
Score = 263 bits (645), Expect = 8e-71
Identities = 119/204 (58%), Positives = 148/204 (72%)
Frame = -3
Query: 750 NVFXXCGXXWNYGALPQTWENXNHVDPDTGARGDNDPVDVIEIGERVASRGDVYPVKILG 571
N+F G WNYGALPQTWE+ NHV PDTGA+GDNDP+DVIE+G +VA RG V VK+LG
Sbjct: 205 NIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPIDVIEVGSKVAGRGAVLQVKVLG 264
Query: 570 TLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPGLLRATVEWFRLYKVPDGKPVN 391
TLALIDEGETDWKL+AID D NA+KLND+ DVE ++PGLL A+VEWFR YK+P GKP N
Sbjct: 265 TLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPGLLAASVEWFRNYKIPAGKPAN 324
Query: 390 KFAFDGEAKNAEFAYKVVDEVHEFWKSLISGNVPDATDINKMNVSVSGSVDRAERSEAAA 211
+FAF+GE KN E+A KV+DE +E+WK+LI P ++++ +V D A AA
Sbjct: 325 EFAFNGEFKNREYAEKVIDETNEYWKTLIKEANPSLNTVSRVPEAVHQGTDEA----AAT 380
Query: 210 VLAKAPTLGQPAAIPQTVDKWHFL 139
+ P G A +P VDKWHF+
Sbjct: 381 AIGATPEHGANAPLPGDVDKWHFV 404
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 263 bits (645), Expect = 8e-71
Identities = 119/204 (58%), Positives = 148/204 (72%)
Frame = -3
Query: 750 NVFXXCGXXWNYGALPQTWENXNHVDPDTGARGDNDPVDVIEIGERVASRGDVYPVKILG 571
N+F G WNYGALPQTWE+ NHV PDTGA+GDNDP+DVIE+G +VA RG V VK+LG
Sbjct: 206 NIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPIDVIEVGSKVAGRGAVLQVKVLG 265
Query: 570 TLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPGLLRATVEWFRLYKVPDGKPVN 391
TLALIDEGETDWKL+AID D NA+KLND+ DVE ++PGLL A+VEWFR YK+P GKP N
Sbjct: 266 TLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPGLLAASVEWFRNYKIPAGKPAN 325
Query: 390 KFAFDGEAKNAEFAYKVVDEVHEFWKSLISGNVPDATDINKMNVSVSGSVDRAERSEAAA 211
+FAF+GE KN E+A KV+DE +E+WK+LI P ++++ +V D A AA
Sbjct: 326 EFAFNGEFKNREYAEKVIDETNEYWKTLIKEANPSLNTVSRVPEAVHQGTDEA----AAT 381
Query: 210 VLAKAPTLGQPAAIPQTVDKWHFL 139
+ P G A +P VDKWHF+
Sbjct: 382 AIGATPEHGANAPLPGDVDKWHFV 405
>Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical
protein C47E12.4a protein.
Length = 338
Score = 263 bits (645), Expect = 8e-71
Identities = 119/204 (58%), Positives = 148/204 (72%)
Frame = -3
Query: 750 NVFXXCGXXWNYGALPQTWENXNHVDPDTGARGDNDPVDVIEIGERVASRGDVYPVKILG 571
N+F G WNYGALPQTWE+ NHV PDTGA+GDNDP+DVIE+G +VA RG V VK+LG
Sbjct: 137 NIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPIDVIEVGSKVAGRGAVLQVKVLG 196
Query: 570 TLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPGLLRATVEWFRLYKVPDGKPVN 391
TLALIDEGETDWKL+AID D NA+KLND+ DVE ++PGLL A+VEWFR YK+P GKP N
Sbjct: 197 TLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPGLLAASVEWFRNYKIPAGKPAN 256
Query: 390 KFAFDGEAKNAEFAYKVVDEVHEFWKSLISGNVPDATDINKMNVSVSGSVDRAERSEAAA 211
+FAF+GE KN E+A KV+DE +E+WK+LI P ++++ +V D A AA
Sbjct: 257 EFAFNGEFKNREYAEKVIDETNEYWKTLIKEANPSLNTVSRVPEAVHQGTDEA----AAT 312
Query: 210 VLAKAPTLGQPAAIPQTVDKWHFL 139
+ P G A +P VDKWHF+
Sbjct: 313 AIGATPEHGANAPLPGDVDKWHFV 336
>AC024810-11|AAK68516.2| 165|Caenorhabditis elegans Hypothetical
protein Y54E10A.17 protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.39
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = +2
Query: 404 PSGTL*SLNHST---VAR-RRPGNNVSTSCTSFNFSAFGSRESIAISFQSVSPSSM 559
PS TL SL++++ VAR RP ++ST CT++NF GS E +I + + +P ++
Sbjct: 98 PSVTLQSLDYNSNTLVARFARPVGSLST-CTTWNFVTEGSIEDGSIGYHNAAPHTV 152
>AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical
protein Y105C5B.2 protein.
Length = 1044
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -3
Query: 423 LYKVPDGKPVNKFAFD--GEAKNAEFAYKVVDEVHEFWKSLISGNVPDATDINKMNVSVS 250
+ ++P P++ +FD G + +A + + S+ SGNV + +NK VSV
Sbjct: 437 IQQMPWRVPLDSISFDDNGGSLSASRRVSTISTARASYSSIFSGNVAEHAIVNKQKVSVK 496
Query: 249 GSVDR 235
V R
Sbjct: 497 RHVQR 501
>L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncogene
protein.
Length = 813
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -3
Query: 297 NVPDATDINKMNVSVSGSVDRAERSEAAAVLAK-APTLGQ-PAAIPQT 160
+VP D+ K ++ V+ +RS A VLA APT GQ PAA P +
Sbjct: 222 SVPKNEDLVKELFGIASQVEGPDRSVAEIVLANLAPTSGQSPAATPDS 269
>AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isoform 3
protein.
Length = 769
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -3
Query: 297 NVPDATDINKMNVSVSGSVDRAERSEAAAVLAK-APTLGQ-PAAIPQT 160
+VP D+ K ++ V+ +RS A VLA APT GQ PAA P +
Sbjct: 178 SVPKNEDLVKELFGIASQVEGPDRSVAEIVLANLAPTSGQSPAATPDS 225
>AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isoform 2
protein.
Length = 813
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -3
Query: 297 NVPDATDINKMNVSVSGSVDRAERSEAAAVLAK-APTLGQ-PAAIPQT 160
+VP D+ K ++ V+ +RS A VLA APT GQ PAA P +
Sbjct: 222 SVPKNEDLVKELFGIASQVEGPDRSVAEIVLANLAPTSGQSPAATPDS 269
>AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein.
Length = 813
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -3
Query: 297 NVPDATDINKMNVSVSGSVDRAERSEAAAVLAK-APTLGQ-PAAIPQT 160
+VP D+ K ++ V+ +RS A VLA APT GQ PAA P +
Sbjct: 222 SVPKNEDLVKELFGIASQVEGPDRSVAEIVLANLAPTSGQSPAATPDS 269
>AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform b protein.
Length = 614
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -3
Query: 297 NVPDATDINKMNVSVSGSVDRAERSEAAAVLAK-APTLGQ-PAAIPQT 160
+VP D+ K ++ V+ +RS A VLA APT GQ PAA P +
Sbjct: 264 SVPKNEDLVKELFGIASQVEGPDRSVAEIVLANLAPTSGQSPAATPDS 311
>AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform a protein.
Length = 813
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -3
Query: 297 NVPDATDINKMNVSVSGSVDRAERSEAAAVLAK-APTLGQ-PAAIPQT 160
+VP D+ K ++ V+ +RS A VLA APT GQ PAA P +
Sbjct: 222 SVPKNEDLVKELFGIASQVEGPDRSVAEIVLANLAPTSGQSPAATPDS 269
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -3
Query: 612 VASRGDVYPVKILGTLALIDEGETDWKLI-AIDSRDPNAEKLNDVQDVETLFPGLLRATV 436
+ + + Y VKI G A E DW L+ A +DP+A+K D + E +
Sbjct: 170 ILNSDNTYEVKIDGESAQTGSLEEDWDLLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPE 229
Query: 435 EWFRLYKVPD 406
+W + +PD
Sbjct: 230 DWEKPEHIPD 239
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -3
Query: 612 VASRGDVYPVKILGTLALIDEGETDWKLI-AIDSRDPNAEKLNDVQDVETLFPGLLRATV 436
+ + + Y VKI G A E DW L+ A +DP+A+K D + E +
Sbjct: 170 ILNSDNTYEVKIDGESAQTGSLEEDWDLLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPE 229
Query: 435 EWFRLYKVPD 406
+W + +PD
Sbjct: 230 DWEKPEHIPD 239
>U13642-5|AAG00036.1| 169|Caenorhabditis elegans Hypothetical
protein ZC395.4 protein.
Length = 169
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = -3
Query: 372 EAKNAEFAYKVVDEVHEFWKSLISGNVPDATDINKMNVSVSGSVD 238
E+K+ E+ + D+ +F K+++ GN +AT+ K+ ++ SVD
Sbjct: 114 ESKDPEYV-TLDDDFPKFEKAILKGNSKEATETRKLEITQQLSVD 157
>Z81128-4|CAB03403.1| 898|Caenorhabditis elegans Hypothetical
protein T23D8.4 protein.
Length = 898
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 271 QNERVSERQRGPGGALRSRRGVGEGSNARAARRHTADS*QVALPREP 131
+NER ++Q+G GG RRG G+G + + + Q P++P
Sbjct: 850 RNERQGDKQKGSGGYQGERRG-GQGQDGKRGNWGSQGGQQRRHPQKP 895
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = +2
Query: 464 NVSTSCTSFNFSAFGSRESIAISFQSVSPSSMRASVPRIFTG*TSPRLATRSPISMTSTG 643
N S S + A S S + S+SPS ++S G TSP ++T S MTS G
Sbjct: 1095 NPSQSTSPSTSGATSSPGSSGTTLTSISPSPSQSSTIGSSQGSTSPVVSTTSG-DMTSQG 1153
Query: 644 SLSPLAPVSGST 679
S + + +GST
Sbjct: 1154 S-TQIPGSTGST 1164
>U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase ii
(b) subunit protein2 protein.
Length = 1193
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 310 TLPKFVNLVNDFVSELCVLSFAVKRELVHRLAVRNF 417
T K++N +DF ++CV + + R L + LA N+
Sbjct: 424 TAQKYINKNDDFALDVCVKTSTITRGLTYSLATGNW 459
>U10333-1|AAA50224.1| 859|Caenorhabditis elegans RNA polymerase II,
second largestsubunit protein.
Length = 859
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 310 TLPKFVNLVNDFVSELCVLSFAVKRELVHRLAVRNF 417
T K++N +DF ++CV + + R L + LA N+
Sbjct: 225 TAQKYINKNDDFALDVCVKTSTITRGLTYSLATGNW 260
>Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical
protein F58G11.5 protein.
Length = 675
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 218 PPRCWRRLQR-SGSPPPYRRQLTSGTSSRTYSSLNTS 111
PPR +R + S SP P RRQ +S SSR+ S + S
Sbjct: 524 PPRDHKRSRSPSRSPSPRRRQRSSSNSSRSSGSSSRS 560
>AL132948-46|CAD31837.2| 473|Caenorhabditis elegans Hypothetical
protein Y39B6A.27 protein.
Length = 473
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -3
Query: 264 NVSVSGSVDRAERSEAAAVLAKAPTLGQPAAIPQTVDKWHFLANL*FAEHIKTDRRFSTL 85
NVS S SV A +LA +L P +PQT AN + E ++ +RR+S
Sbjct: 139 NVSFSWSVSCFCLMIGAGILATITSLSTPPTVPQT-------ANSTWQEEVRHERRYSDF 191
Query: 84 STK 76
K
Sbjct: 192 EIK 194
>AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CTD
associated factor 6 protein.
Length = 675
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 218 PPRCWRRLQR-SGSPPPYRRQLTSGTSSRTYSSLNTS 111
PPR +R + S SP P RRQ +S SSR+ S + S
Sbjct: 524 PPRDHKRSRSPSRSPSPRRRQRSSSNSSRSSGSSSRS 560
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 467 VSTSCTSFNFSAFGSRESIAISFQSVSPSSMRASVPRIFTG*TSPRLATRSPISMTSTGS 646
V T+CT +A + +I+ + S S ++ PRI T + T P+S T S
Sbjct: 100 VWTNCTETTSTA-STEFTISSTSLKTSTSDSTSTEPRISTTTDTKDTTTEDPVSSTDQSS 158
Query: 647 LSP 655
SP
Sbjct: 159 TSP 161
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.3 bits (60), Expect = 6.3
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Frame = +2
Query: 422 SLNHSTVARRRPGNNVST---SCTSFNFSAFGSRESIAISFQSVSPSSMRA---SVPRIF 583
+++ ST + PG+ ST S + + GS S ++S S+M S
Sbjct: 915 TMSASTGSTDTPGSTESTITGSTVTGESTVSGSTGSTITEGSTISESTMTTVGVSTGSTI 974
Query: 584 TG*TSPRLATRSPISMTSTGSLSPLAPVSGST 679
TG ++ +TRS ++ ST S S + VSGST
Sbjct: 975 TGESTVSGSTRSTVTGESTVSGSTESTVSGST 1006
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 66 DCITLLIKLRIADLF*CVQRTIGSRGSATCQLSAVWRRAARALEPSPTPRRLR 224
D ++ LI LRI + CV+ + + A+ +L V RALEP+PT +R
Sbjct: 677 DTVSNLISLRIPQGYRCVENAMAT---ASSELEQV----VRALEPNPTVPAIR 722
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 66 DCITLLIKLRIADLF*CVQRTIGSRGSATCQLSAVWRRAARALEPSPTPRRLR 224
D ++ LI LRI + CV+ + + A+ +L V RALEP+PT +R
Sbjct: 675 DTVSNLISLRIPQGYRCVENAMAT---ASSELEQV----VRALEPNPTVPAIR 720
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 66 DCITLLIKLRIADLF*CVQRTIGSRGSATCQLSAVWRRAARALEPSPTPRRLR 224
D ++ LI LRI + CV+ + + A+ +L V RALEP+PT +R
Sbjct: 677 DTVSNLISLRIPQGYRCVENAMAT---ASSELEQV----VRALEPNPTVPAIR 722
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 66 DCITLLIKLRIADLF*CVQRTIGSRGSATCQLSAVWRRAARALEPSPTPRRLR 224
D ++ LI LRI + CV+ + + A+ +L V RALEP+PT +R
Sbjct: 677 DTVSNLISLRIPQGYRCVENAMAT---ASSELEQV----VRALEPNPTVPAIR 722
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 66 DCITLLIKLRIADLF*CVQRTIGSRGSATCQLSAVWRRAARALEPSPTPRRLR 224
D ++ LI LRI + CV+ + + A+ +L V RALEP+PT +R
Sbjct: 675 DTVSNLISLRIPQGYRCVENAMAT---ASSELEQV----VRALEPNPTVPAIR 720
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 66 DCITLLIKLRIADLF*CVQRTIGSRGSATCQLSAVWRRAARALEPSPTPRRLR 224
D ++ LI LRI + CV+ + + A+ +L V RALEP+PT +R
Sbjct: 677 DTVSNLISLRIPQGYRCVENAMAT---ASSELEQV----VRALEPNPTVPAIR 722
>U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical
protein C01G8.9b protein.
Length = 661
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -1
Query: 194 QRSGSPPPYRRQLTSGTSSRTYSSLNTSKQIGDS 93
++S SPPP +R S ++ SS++T+ +GD+
Sbjct: 616 EQSRSPPPAKRAHLSNGFDKSKSSVSTNGTLGDA 649
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -1
Query: 194 QRSGSPPPYRRQLTSGTSSRTYSSLNTSKQIGDS 93
++S SPPP +R S ++ SS++T+ +GD+
Sbjct: 1679 EQSRSPPPAKRAHLSNGFDKSKSSVSTNGTLGDA 1712
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 66 DCITLLIKLRIADLF*CVQRTIGSRGSATCQLSAVWRRAARALEPSPTPRRLR 224
D ++ LI LRI + CV+ + + A+ +L V RALEP+PT +R
Sbjct: 677 DTVSNLISLRIPQGYRCVENAMAT---ASSELEQV----VRALEPNPTVPAIR 722
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,200,265
Number of Sequences: 27780
Number of extensions: 280847
Number of successful extensions: 1104
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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