Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_C07
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 37 0.018
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 37 0.018
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 37 0.018
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 35 0.055
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.30
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.30
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.30
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.39
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.39
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 31 1.2
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 2.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 3.6
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 4.8
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 28 6.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 6.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 6.4
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 6.4
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 8.4
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 36.7 bits (81), Expect = 0.018
Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 3/88 (3%)
Frame = +2
Query: 377 PPHXPPXXPPPXXGXXXLXGXXAXXXXPXXXXXXVXSXG---VAXXARPPRPXPGXXXPX 547
PP P PPP G L G + P G PP P G P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 548 PXAXXPSAXGRPXPPXSGPXXXXXXPPR 631
P A P P PP P PP+
Sbjct: 292 PRAGSPPP---PPPPRGSPPTGSLPPPQ 316
Score = 31.9 bits (69), Expect = 0.52
Identities = 27/104 (25%), Positives = 30/104 (28%)
Frame = +2
Query: 374 PPPHXPPXXPPPXXGXXXLXGXXAXXXXPXXXXXXVXSXGVAXXARPPRPXPGXXXPXPX 553
PPP PPP G + P G + PP P P P
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG----SPPPPPPPRGSPPTGS 311
Query: 554 AXXPSAXGRPXPPXSGPXXXXXXPPRXXRXRXGXRXLAGXXPXG 685
P A G P P +G PPR R G P G
Sbjct: 312 LPPPQAGGSPPPAGTG---SPPPPPRQKRQAPERSPPTGSPPTG 352
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 36.7 bits (81), Expect = 0.018
Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 3/88 (3%)
Frame = +2
Query: 377 PPHXPPXXPPPXXGXXXLXGXXAXXXXPXXXXXXVXSXG---VAXXARPPRPXPGXXXPX 547
PP P PPP G L G + P G PP P G P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 548 PXAXXPSAXGRPXPPXSGPXXXXXXPPR 631
P A P P PP P PP+
Sbjct: 313 PRAGSPPP---PPPPRGSPPTGSLPPPQ 337
Score = 31.9 bits (69), Expect = 0.52
Identities = 27/104 (25%), Positives = 30/104 (28%)
Frame = +2
Query: 374 PPPHXPPXXPPPXXGXXXLXGXXAXXXXPXXXXXXVXSXGVAXXARPPRPXPGXXXPXPX 553
PPP PPP G + P G + PP P P P
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG----SPPPPPPPRGSPPTGS 332
Query: 554 AXXPSAXGRPXPPXSGPXXXXXXPPRXXRXRXGXRXLAGXXPXG 685
P A G P P +G PPR R G P G
Sbjct: 333 LPPPQAGGSPPPAGTG---SPPPPPRQKRQAPERSPPTGSPPTG 373
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.018
Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 3/88 (3%)
Frame = +2
Query: 377 PPHXPPXXPPPXXGXXXLXGXXAXXXXPXXXXXXVXSXG---VAXXARPPRPXPGXXXPX 547
PP P PPP G L G + P G PP P G P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 548 PXAXXPSAXGRPXPPXSGPXXXXXXPPR 631
P A P P PP P PP+
Sbjct: 298 PRAGSPPP---PPPPRGSPPTGSLPPPQ 322
Score = 31.9 bits (69), Expect = 0.52
Identities = 27/104 (25%), Positives = 30/104 (28%)
Frame = +2
Query: 374 PPPHXPPXXPPPXXGXXXLXGXXAXXXXPXXXXXXVXSXGVAXXARPPRPXPGXXXPXPX 553
PPP PPP G + P G + PP P P P
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG----SPPPPPPPRGSPPTGS 317
Query: 554 AXXPSAXGRPXPPXSGPXXXXXXPPRXXRXRXGXRXLAGXXPXG 685
P A G P P +G PPR R G P G
Sbjct: 318 LPPPQAGGSPPPAGTG---SPPPPPRQKRQAPERSPPTGSPPTG 358
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 35.1 bits (77), Expect = 0.055
Identities = 24/69 (34%), Positives = 24/69 (34%)
Frame = -2
Query: 565 GXGGPGXXXXXPGXGXGRXXXXGDPXRXNXXXPXGGRGXXGXXXXXRXXXXXGGGGXGGX 386
G GGPG G G G G GG G G R GGGG GG
Sbjct: 49 GGGGPGWGRGGGGSGWG-GGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGG 107
Query: 385 VXGGXGXXG 359
GG G G
Sbjct: 108 -GGGRGGGG 115
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = -2
Query: 565 GXGGPGXXXXXPGXGXGRXXXXGDPXRXNXXXPXGGRGXXGXXXXXRXXXXXGGGGXGGX 386
G G PG PG G G R GG G G GGG GG
Sbjct: 42 GWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGG 101
Query: 385 VXGGXGXXG 359
G G G
Sbjct: 102 GGRGGGGGG 110
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = +2
Query: 374 PPPHXPPXXPPPXXGXXXLXGXXAXXXXPXXXXXXVXSXGVAXXARPPRPXPGXXXPXPX 553
PP P PPP G + G P ++ PP P PG P P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP------ISGGPPPPPPPPGGCPPPPP 773
Query: 554 AXXPSA--XGRPXPPXSG 601
P G P PP G
Sbjct: 774 PPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = +2
Query: 374 PPPHXPPXXPPPXXGXXXLXGXXAXXXXPXXXXXXVXSXGVAXXARPPRPXPGXXXPXPX 553
PP P PPP G + G P ++ PP P PG P P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP------ISGGPPPPPPPPGGCPPPPP 773
Query: 554 AXXPSA--XGRPXPPXSG 601
P G P PP G
Sbjct: 774 PPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = +2
Query: 374 PPPHXPPXXPPPXXGXXXLXGXXAXXXXPXXXXXXVXSXGVAXXARPPRPXPGXXXPXPX 553
PP P PPP G + G P ++ PP P PG P P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP------ISGGPPPPPPPPGGCPPPPP 356
Query: 554 AXXPSA--XGRPXPPXSG 601
P G P PP G
Sbjct: 357 PPPPGGFKGGPPPPPPPG 374
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.39
Identities = 24/83 (28%), Positives = 26/83 (31%)
Frame = +2
Query: 512 PPRPXPGXXXPXPXAXXPSAXGRPXPPXSGPXXXXXXPPRXXRXRXGXRXLAGXXPXGXS 691
PP P P P P RP PP S PP R G + G P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGR-TPGPPGMPGMPPPPP- 321
Query: 692 AXXSFPSXXXSPGXPXLPPXAXP 760
PS PG +PP P
Sbjct: 322 -----PSRFGPPGMGGMPPPPPP 339
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/87 (25%), Positives = 23/87 (26%), Gaps = 1/87 (1%)
Frame = +3
Query: 498 PXXXXLPXPXPGXXXXXPGPPXPRXXXXXXPXXRXPSXXXXXPRGGXAXGXAXXXSXAXX 677
P +P P P P PP P P P P G S
Sbjct: 268 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP 327
Query: 678 P-PGGPPXXXFRXAXXPXGXPXSXPXR 755
P GG P P G P P R
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPPPR 354
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +2
Query: 377 PPHXPPXXPPPXXGXXXLXGXXAXXXXPXXXXXXVXSXGVAXXARPPRPXPGXXXPXPXA 556
PP P PPP G P + G PP P P P
Sbjct: 310 PPGMPGMPPPPPPSRF---GPPGMGGMPPPPPPGMRYPG----GMPPPPPPRYPSAGPGM 362
Query: 557 XXPSAXGRPXPPXSGPXXXXXXPP 628
P RP P SG PP
Sbjct: 363 YPPPPPSRPPAPPSGHGMIPPPPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.39
Identities = 24/83 (28%), Positives = 26/83 (31%)
Frame = +2
Query: 512 PPRPXPGXXXPXPXAXXPSAXGRPXPPXSGPXXXXXXPPRXXRXRXGXRXLAGXXPXGXS 691
PP P P P P RP PP S PP R G + G P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGR-TPGPPGMPGMPPPPP- 331
Query: 692 AXXSFPSXXXSPGXPXLPPXAXP 760
PS PG +PP P
Sbjct: 332 -----PSRFGPPGMGGMPPPPPP 349
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/87 (25%), Positives = 23/87 (26%), Gaps = 1/87 (1%)
Frame = +3
Query: 498 PXXXXLPXPXPGXXXXXPGPPXPRXXXXXXPXXRXPSXXXXXPRGGXAXGXAXXXSXAXX 677
P +P P P P PP P P P P G S
Sbjct: 278 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP 337
Query: 678 P-PGGPPXXXFRXAXXPXGXPXSXPXR 755
P GG P P G P P R
Sbjct: 338 PGMGGMPPPPPPGMRYPGGMPPPPPPR 364
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +2
Query: 377 PPHXPPXXPPPXXGXXXLXGXXAXXXXPXXXXXXVXSXGVAXXARPPRPXPGXXXPXPXA 556
PP P PPP G P + G PP P P P
Sbjct: 320 PPGMPGMPPPPPPSRF---GPPGMGGMPPPPPPGMRYPG----GMPPPPPPRYPSAGPGM 372
Query: 557 XXPSAXGRPXPPXSGPXXXXXXPP 628
P RP P SG PP
Sbjct: 373 YPPPPPSRPPAPPSGHGMIPPPPP 396
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.68
Identities = 23/85 (27%), Positives = 23/85 (27%)
Frame = -3
Query: 627 GGXXXXXXGPDXGGXGRPXAEGXXAXGXGXXXPGXGRGGRAXXATPXEXTXXXXXXGXXX 448
GG G GG G G G G G G GG P G
Sbjct: 69 GGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG 128
Query: 447 XAXXPXSXXXPXXGGGXXGGXXGGG 373
GGG GG GGG
Sbjct: 129 CGGGCGGGGGGGCGGGGGGGCGGGG 153
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 407 GGGXXGGXXGGXXXXGXXXXXXAPPPP 327
GGG GG GG G APPPP
Sbjct: 88 GGGGCGGGGGGCGGGGGCGGGCAPPPP 114
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 463 GGRGXXGXXXXXRXXXXXGGGGXGGXVXGGXGXXG 359
GGRG G GGGG GG GG G G
Sbjct: 27 GGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGG 61
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 630 RGGXXXXXXGPDXGGXGRPXAEGXXAXGXGXXXPGXGRGG 511
RGG G GG G G G G G GRGG
Sbjct: 29 RGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRGG 68
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/93 (30%), Positives = 30/93 (32%), Gaps = 2/93 (2%)
Frame = -2
Query: 565 GXGGPGXXXXXPGX-GXGRXXXXG-DPXRXNXXXPXGGRGXXGXXXXXRXXXXXGGGGXG 392
G GG G G G GR G D GGRG G GGG G
Sbjct: 84 GNGGFGDNGGLRGGNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGNGGGRG 143
Query: 391 GXVXGGXGXXGXXXXXXHRPRRSGASSPTSXIL 293
G GG G RP+ S T +L
Sbjct: 144 GN-GGGNNGGGRGGNGGGRPQISAGERITHNVL 175
Score = 27.9 bits (59), Expect = 8.4
Identities = 28/113 (24%), Positives = 28/113 (24%), Gaps = 1/113 (0%)
Frame = -2
Query: 694 GGP-PGGXXAXEXXXAXPXAXPPRGXXXXXXGXRXXGXXXXXXRGXGGPGXXXXXPGXGX 518
GGP P G G G G RG G G G
Sbjct: 35 GGPGPRGPGEWNNGGGRGGFGGNNGWNNGGGGFNGNGGFNGGGRGGGRGGNGGFGDNGGL 94
Query: 517 GRXXXXGDPXRXNXXXPXGGRGXXGXXXXXRXXXXXGGGGXGGXVXGGXGXXG 359
G GGRG G GGG GG GG G G
Sbjct: 95 RGGNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGN-GGGRGGNG 146
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 565 GXGGPGXXXXXPGXGXGRXXXXGDPXRXNXXXPXGGRGXXGXXXXXRXXXXXGGGG 398
G GG G G G G D R GGRG G GGGG
Sbjct: 218 GGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGGG 273
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/75 (32%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Frame = +2
Query: 374 PPPHXPPXXPPPXXGXXXLXGXXAXXXXP-XXXXXXVXSXGVAXXARPP-RPXPGXXXPX 547
PPP PP PP G G P V S G A PP P P
Sbjct: 210 PPPPGPP-GPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDGS 268
Query: 548 PXAXXPSAXGRPXPP 592
A P G P PP
Sbjct: 269 GGAAQPGPPGPPGPP 283
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/82 (26%), Positives = 22/82 (26%)
Frame = -2
Query: 604 GXRXXGXXXXXXRGXGGPGXXXXXPGXGXGRXXXXGDPXRXNXXXPXGGRGXXGXXXXXR 425
G G G GG G G G R GRG G
Sbjct: 97 GGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGD 156
Query: 424 XXXXXGGGGXGGXVXGGXGXXG 359
GGG GG GG G G
Sbjct: 157 WGGNGGGGRGGGGGRGGGGGGG 178
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 407 GGGXXGGXXGGXXXXGXXXXXXAPPPP 327
GGG GG GG APPPP
Sbjct: 15 GGGGGGGGGGGEAGYSGGAGVEAPPPP 41
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 407 GGGXXGGXXGGXXXXGXXXXXXAPPPP 327
GGG GG G G APPPP
Sbjct: 279 GGGSSGGYAGSSGGGGYSAPAAAPPPP 305
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 407 GGGXXGGXXGGXXXXGXXXXXXAPPPP 327
GGG GG G G APPPP
Sbjct: 279 GGGSSGGYAGSSGGGGYSAPAAAPPPP 305
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/85 (23%), Positives = 20/85 (23%)
Frame = +2
Query: 374 PPPHXPPXXPPPXXGXXXLXGXXAXXXXPXXXXXXVXSXGVAXXARPPRPXPGXXXPXPX 553
PPP P P P V A PP P P P P
Sbjct: 67 PPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPA 126
Query: 554 AXXPSAXGRPXPPXSGPXXXXXXPP 628
P PP P PP
Sbjct: 127 PYQQQPPPPPPPPHYPPPPPHYPPP 151
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/85 (27%), Positives = 25/85 (29%), Gaps = 3/85 (3%)
Frame = +2
Query: 515 PRPXPGXXXPXPXAXXPSAXGRPXPPXSGPXXXXXXPPRXXRXRXGXRXLAG---XXPXG 685
P P P P + P PP SGP PP G G P G
Sbjct: 359 PSPQSFGGPPPPVSSAPGNFA--PPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGG 416
Query: 686 XSAXXSFPSXXXSPGXPXLPPXAXP 760
A S+ PG PP P
Sbjct: 417 PGAPGSYGPPQGGPGGFGPPPPGGP 441
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = -2
Query: 565 GXGGPGXXXXXPGXGXGRXXXXGDPXRXNXXXPXGGRGXXGXXXXXRXXXXXGGGGXGGX 386
G GG G G G G P GG G G GGG GG
Sbjct: 120 GGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGG 179
Query: 385 VXGGXGXXG 359
GG G G
Sbjct: 180 -DGGYGGGG 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,679,794
Number of Sequences: 27780
Number of extensions: 165840
Number of successful extensions: 1115
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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