Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_C04
(823 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.009
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.009
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.009
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 37 0.020
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 33 0.33
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.57
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.00
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.00
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.3
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 30 1.7
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 1.7
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 30 1.7
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 1.7
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 1.7
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 30 1.7
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 2.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 4.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.3
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 7.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 9.3
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 28 9.3
AL023838-8|CAL36503.1| 79|Caenorhabditis elegans Hypothetical ... 28 9.3
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 9.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 627 PPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPPKXLPXXSXXPXXP 764
PP + PPP PP P PP PP LP S P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 615 PXXXPPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPPKXLP 737
P PP PPP PP P P PPK +P
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +3
Query: 606 PRRPXXXPPXXXALXXXPPP-XXPPVXXXPXXXXPPXXXPP 725
P P PP PPP PP+ P PP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +3
Query: 615 PXXXPPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPP 725
P P + PPP PP P PP PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 627 PPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPPKXLPXXSXXPXXP 764
PP + PPP PP P PP PP LP S P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 615 PXXXPPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPPKXLP 737
P PP PPP PP P P PPK +P
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +3
Query: 606 PRRPXXXPPXXXALXXXPPP-XXPPVXXXPXXXXPPXXXPP 725
P P PP PPP PP+ P PP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +3
Query: 615 PXXXPPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPP 725
P P + PPP PP P PP PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 627 PPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPPKXLPXXSXXPXXP 764
PP + PPP PP P PP PP LP S P P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 615 PXXXPPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPPKXLP 737
P PP PPP PP P P PPK +P
Sbjct: 353 PPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 393
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +3
Query: 606 PRRPXXXPPXXXALXXXPPP-XXPPVXXXPXXXXPPXXXPP 725
P P PP PPP PP+ P PP PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +3
Query: 615 PXXXPPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPP 725
P P + PPP PP P PP PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 36.7 bits (81), Expect = 0.020
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = +3
Query: 585 PRAXXXXPRRPXXXPPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPPKXLPXXSXXPXXP 764
PR P PP PP PP P PP PPK P + P P
Sbjct: 373 PRTEPPKTEPPTTEPPKIEPPRTEPPKTEPP-PTEPPKTEPPKTTPPKTEPPTTEPPNIP 431
Query: 765 YLSXRXXXLTQPRXXP 812
Y + L P P
Sbjct: 432 YCWQQQSRLFAPSPPP 447
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -1
Query: 763 GXXGXXDXXGXXFGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXGGXXXGRRGXXXXAR 587
G G D G GG G G GG GG R GG G RG R
Sbjct: 103 GGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGGRGGNGGGR 161
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = -1
Query: 769 RXGXXGXXDXXGXXFGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXG-GXXXGRRGXXXX 593
R G G D G GG G G GG GG R G G G RG
Sbjct: 82 RGGNGGFGDNGGLR-GGNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGNGG 140
Query: 592 ARG 584
RG
Sbjct: 141 GRG 143
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 0.57
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 606 PRRPXXXPPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPPKXLPXXSXXPXXPY 767
P P PP PPP PP P PP PP P S P Y
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPP----PPPPPPPPMCPPPPPPMPSYSPCQSY 90
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 1/70 (1%)
Frame = +2
Query: 614 PXXXATXXXCPXXRASPXXXPRXPXXPXXPXPXXXXSKXXPXLVXPPPX-PXPLXPXXXP 790
P +T C P P P P P P PPP P P P P
Sbjct: 13 PIASSTFGGCCSMGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
Query: 791 DXTXXXPPXP 820
PP P
Sbjct: 73 MCPPPPPPMP 82
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +3
Query: 606 PRRPXXXPPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPPKXLPXXSXXPXXPYLS 773
P P PP L PPP PP P PP PP P P S
Sbjct: 33 PPPPMCAPPP---LPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYS 85
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/54 (27%), Positives = 18/54 (33%)
Frame = +2
Query: 659 SPXXXPRXPXXPXXPXPXXXXSKXXPXLVXPPPXPXPLXPXXXPDXTXXXPPXP 820
+P P+ P P S + PP P PL P P PP P
Sbjct: 458 TPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 511
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/54 (27%), Positives = 18/54 (33%)
Frame = +2
Query: 659 SPXXXPRXPXXPXXPXPXXXXSKXXPXLVXPPPXPXPLXPXXXPDXTXXXPPXP 820
+P P+ P P S + PP P PL P P PP P
Sbjct: 465 TPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 518
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/71 (30%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Frame = +3
Query: 615 PXXXPPXXXALXXXPPPXXPP-VXXXPXXXXPPXXXPPKXLPXXSXXP--XXPYLSXRXX 785
P P A PPP PP V P PP PP P P P R
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNP 183
Query: 786 XLTQPRXXPXP 818
T P P P
Sbjct: 184 PRTPPSPIPPP 194
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = +3
Query: 657 PPPXXPPVXXXPXXXXPPXXXP---PKXLPXXSXXPXXPYLSXRXXXLTQPRXXPXPQ 821
PPP PP PP P P+ P S P P ++ PR P P+
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPE 179
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -1
Query: 763 GXXGXXDXXGXXFGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXGGXXXG 614
G G + G FGG GG G G GGG + GG G
Sbjct: 22 GGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKAGG 71
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = -1
Query: 754 GXXDXXGXXFGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXGGXXXG 614
G + G FGG GG G G GGG + GG G
Sbjct: 45 GGGNTGGSGFGGGNTGGSGFGGGKAGGSGFGGGNTCGSGFGGGSTGG 91
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -1
Query: 754 GXXDXXGXXFGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXGGXXXG 614
G G FGG GG G G GGG + GG G
Sbjct: 35 GGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKAGGSGFGGGNTCG 81
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = -1
Query: 736 GXXFGGXXXGGXXXXGXXXT-GGXXGGGXXXRAXXXGGXXXGRRGXXXXARG 584
G +GG GG G GG GGG GG G RG RG
Sbjct: 61 GSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRG 112
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -1
Query: 763 GXXGXXDXXGXXFGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXGGXXXG 614
G G + G FGG GG G G GGG + GG G
Sbjct: 22 GGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGG 71
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = -1
Query: 754 GXXDXXGXXFGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXGGXXXG 614
G + G FGG GG G G GGG + GG G
Sbjct: 45 GGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGG 91
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -1
Query: 754 GXXDXXGXXFGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXGGXXXG 614
G G FGG GG G G GGG + GG G
Sbjct: 35 GGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCG 81
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/81 (27%), Positives = 23/81 (28%), Gaps = 2/81 (2%)
Frame = -1
Query: 820 WGXGXSRGXVRXXXRXERXGXXGXXDXXGXXFGGXXXGGXXXXGXXXTGG--XXGGGXXX 647
WG G RG G G +GG GG G GG GGG
Sbjct: 57 WGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWG 116
Query: 646 RAXXXGGXXXGRRGXXXXARG 584
G G G RG
Sbjct: 117 GGGNNDGGWGGNNGGGGGGRG 137
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 644 PXXRASPXXXPRXPXXPXXPXPXXXXSKXXPXLVXPPPXPXPLXP 778
P SP P P P P P + P PP P P P
Sbjct: 536 PSPEPSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPPAKP 580
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -1
Query: 763 GXXGXXDXXGXXFGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXGGXXXG 614
G G + G FGG GG G G GGG + GG G
Sbjct: 22 GGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGG 71
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = -1
Query: 754 GXXDXXGXXFGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXGGXXXG 614
G + G FGG GG G G GGG + GG G
Sbjct: 45 GGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGG 91
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -1
Query: 754 GXXDXXGXXFGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXGGXXXG 614
G G FGG GG G G GGG + GG G
Sbjct: 35 GGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCG 81
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +2
Query: 641 CPXXRASPXXXPRXPXXPXXPXPXXXXSKXXPXLVXPPPXPXPLXPXXXPDXTXXXPPXP 820
C R SP P P P P P P V P P P P P PP P
Sbjct: 71 CGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAP-AAPCCPPPPPPTP 129
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/65 (27%), Positives = 18/65 (27%)
Frame = +2
Query: 626 ATXXXCPXXRASPXXXPRXPXXPXXPXPXXXXSKXXPXLVXPPPXPXPLXPXXXPDXTXX 805
A P P P P P P P PPP P P P P
Sbjct: 91 AVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPP--PHYPPPPPHY 148
Query: 806 XPPXP 820
PP P
Sbjct: 149 PPPPP 153
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +2
Query: 656 ASPXXXPRXPXXPXXPXPXXXXSKXXPXLVXPPPXPXPLXPXXXPDXTXXXPPXPK 823
A+ P P P P P S P PPP P P P P P+
Sbjct: 20 AATTPQPPPPPPPPKPAPYVEQSAQ-PQQTAPPPPPAPYPQQAVPAPAPPPAPYPQ 74
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 606 PRRPXXXPPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPP 725
P P PP L PPP PP P PP PP
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPP---PPMLGGPPPPPPP 595
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = -1
Query: 736 GXXFGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXGGXXXGRRGXXXXARG 584
G G GG G +GG GGG + GG G G G
Sbjct: 789 GGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNG 839
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 627 PPXXXALXXXPPPXXPPVXXXPXXXXPPXXXPPK 728
PP A PPP PP P PP P+
Sbjct: 57 PPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPR 90
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 727 FGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXGGXXXGRRG 605
FGG G G G GGG R GG G RG
Sbjct: 318 FGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGGFRGGDRG 358
>AL023838-8|CAL36503.1| 79|Caenorhabditis elegans Hypothetical
protein Y43C5A.7 protein.
Length = 79
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 727 FGGXXXGGXXXXGXXXTGGXXGGGXXXRAXXXGGXXXGRR 608
FGG GG G GG GG GG GRR
Sbjct: 24 FGGMPMGGMGMGGMGMMGGPYGGMGGGPYGGMGGGGWGRR 63
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/64 (23%), Positives = 19/64 (29%)
Frame = +3
Query: 630 PXXXALXXXPPPXXPPVXXXPXXXXPPXXXPPKXLPXXSXXPXXPYLSXRXXXLTQPRXX 809
P + PPP PP P PP P P P L + +
Sbjct: 58 PNDNIVKATPPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPT 117
Query: 810 PXPQ 821
P P+
Sbjct: 118 PRPK 121
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,035,906
Number of Sequences: 27780
Number of extensions: 154500
Number of successful extensions: 1153
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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