Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_B22
(798 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0193 - 14073103-14073246,14073332-14073481,14073571-140736... 33 0.26
01_03_0005 + 11568545-11569119,11569179-11569191 32 0.61
02_02_0029 + 6204557-6204734,6205105-6205207,6205970-6206108 31 1.1
05_01_0137 + 917533-917814,918080-918352 31 1.4
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 30 1.9
07_03_1136 + 24218601-24218734,24218769-24219906 30 2.5
07_01_0439 + 3333654-3334217 30 2.5
09_06_0125 - 21011757-21012428 29 3.2
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 5.7
02_04_0348 - 22199564-22200412 29 5.7
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 29 5.7
02_01_0062 - 448105-448145,448780-448866,449664-449790 29 5.7
01_01_0083 + 631196-631675 29 5.7
12_01_0454 + 3580332-3581714 28 7.5
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 28 7.5
11_06_0292 - 22015603-22015716,22015774-22016163 28 9.9
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 9.9
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 28 9.9
>08_02_0193 -
14073103-14073246,14073332-14073481,14073571-14073640,
14073900-14074021,14074260-14074395,14074492-14074967
Length = 365
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 434 SPPPQXKGGGXXXXXXXFFXYFXPPPPPXXXXXXFFXPXXPPP 562
SPPP YF PPPPP + P PPP
Sbjct: 29 SPPPPTTPESCPDGPSPVAPYFAPPPPPLCRRRRSWPPPPPPP 71
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 31.9 bits (69), Expect = 0.61
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 494 YFXPPPPPXXXXXXFFXPXXPPPXGGGGG 580
Y+ PPPPP P P GGGGG
Sbjct: 54 YYPPPPPPVVTPTPQCPPPPSYPSGGGGG 82
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +2
Query: 437 PPPQXKGGGXXXXXXXFFXYFXPPPPPXXXXXXFFXP----XXPPPXGGGGG 580
PPP GG Y PPPP PPP GGGGG
Sbjct: 71 PPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGG 122
>02_02_0029 + 6204557-6204734,6205105-6205207,6205970-6206108
Length = 139
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 503 PPPPPXXXXXXFFXPXXPPPXGGGGG 580
PPPPP FF P PP GGGG
Sbjct: 36 PPPPPP-----FFPPQWAPPVAGGGG 56
>05_01_0137 + 917533-917814,918080-918352
Length = 184
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Frame = +3
Query: 474 PXPXFFXIFXPPPPPXXXXXFF----FXPXXPPPXGGGGG 581
P P PPPPP F P PPP GGGG
Sbjct: 59 PAPTTTTTTSPPPPPSFRRRSFCRRCTPPPPPPPAAGGGG 98
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 7/43 (16%)
Frame = +3
Query: 474 PXPXFFXIFXPPPPPXXXXXFFFXPXXPPP-------XGGGGG 581
P P +F PPP F P PPP GGGGG
Sbjct: 55 PPPQVIRVFAAAPPPPPAAFFAAVPPPPPPPFEYYPAVGGGGG 97
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 577 PPPPXGGGXXGXKKXXXXXXGGGGGXKIXKKXGXG 473
PP P GGG G + GGGGG + + G G
Sbjct: 132 PPAPGGGGGGGAPR--RVLGGGGGGGALARPPGGG 164
>07_01_0439 + 3333654-3334217
Length = 187
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Frame = +2
Query: 434 SPPPQXKG----GGXXXXXXXFFXYFXPPPPPXXXXXXFFXPXXPPPXGGGGGXKXKXIF 601
SPPP KG GG PPPPP P GGGGG I
Sbjct: 8 SPPPSSKGKRRPGGIIRGPRPQPLIVSPPPPPPPASRPPKKPRVVASGGGGGGDAGPVIV 67
Query: 602 F 604
+
Sbjct: 68 Y 68
>09_06_0125 - 21011757-21012428
Length = 223
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 503 PPPPPXXXXXXFFXPXXPPPXGGG 574
P PPP F P PPP G G
Sbjct: 169 PSPPPPPPRAPFLAPPPPPPVGSG 192
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 474 PXPXFFXIFXPPPPPXXXXXFFFXPXXPPPXGGGGG 581
P P PPPPP P PPP GG GG
Sbjct: 1099 PPPPSIGAGAPPPPPPPGGITGVPP--PPPIGGLGG 1132
>02_04_0348 - 22199564-22200412
Length = 282
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +2
Query: 506 PPPPXXXXXXFFXPXXPPPXGGGGGXKXKXIFFF 607
PPPP P P GGGGG + + +F
Sbjct: 8 PPPPAAAAAAAATPTPPARGGGGGGVEFRRKLYF 41
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 437 PPPQXKGGGXXXXXXXFFXYFXPPPPP 517
PPP +GGG + PPPPP
Sbjct: 16 PPPFGRGGGGAGYPRGHKQLYAPPPPP 42
>02_01_0062 - 448105-448145,448780-448866,449664-449790
Length = 84
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 505 PPPPXXXXXXFFXPXXPPPXXGGGG 579
PPPP FF P PP GGGG
Sbjct: 18 PPPPPPP---FFPPQWAPPVPGGGG 39
>01_01_0083 + 631196-631675
Length = 159
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 425 FFXSPPPQXKGGGXXXXXXXFFXYFXPPPPPXXXXXXFFXPXXPPP 562
++ PPPQ GGG + Y+ PP F P PPP
Sbjct: 74 YWNYPPPQGGGGG-------YIPYYQPPAGGGGGGGGFNYPAPPPP 112
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = +2
Query: 437 PPPQXKGGGXXXXXXXFFXYFXPPPPPXXXXXXFFXPXXPPPXGGGGG 580
PPP ++ Y PPP + PP GGGGG
Sbjct: 58 PPPSSSSSNTPPSSSSYWNY----PPPQGGGGGYIPYYQPPAGGGGGG 101
>12_01_0454 + 3580332-3581714
Length = 460
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -3
Query: 580 PPPPPXGGGXXGXKKXXXXXXGGGGGXKIXKKXG 479
PPPPP G ++ GGGGG + G
Sbjct: 373 PPPPPTSGRRRHKQEEPEFTWGGGGGNEFLDVKG 406
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 503 PPPPPXXXXXXFFXPXXPPPXGGGGG 580
PPPPP P P GGGGG
Sbjct: 52 PPPPPPPPTQPAPPPPPPARSGGGGG 77
>11_06_0292 - 22015603-22015716,22015774-22016163
Length = 167
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 580 PPPPPXGGGXXGXKKXXXXXXGGGGGXKIXKKXGXG 473
P P GGG G ++ GGGG ++ G G
Sbjct: 50 PSPSSDGGGGGGGEEEEPRIGGGGGAAGAGEREGRG 85
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 494 YFXPPPPPXXXXXXFFXPXXPPP 562
Y+ PPPPP P PPP
Sbjct: 89 YYQPPPPPPPYGVNSSQPPPPPP 111
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 453 RGGGXXXPXPXFFXIFXPPPPPXXXXXFFFXPXXPPP 563
RGGG P F PPPP P PP
Sbjct: 248 RGGGAIPGLPAGFPFLLRPPPPLPVPGVICRPPPSPP 284
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,092,986
Number of Sequences: 37544
Number of extensions: 379192
Number of successful extensions: 2586
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1675
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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