Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_B22
         (798 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    29   3.9  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    29   5.1  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    29   5.1  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    29   5.1  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    28   6.7  

>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 15/36 (41%), Positives = 15/36 (41%)
 Frame = -3

Query: 580 PPPPPXGGGXXGXKKXXXXXXGGGGGXKIXKKXGXG 473
           PPPP  GGG  G         GGGGG       G G
Sbjct: 113 PPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGG 148


>Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical
           protein ZC168.5 protein.
          Length = 172

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +2

Query: 503 PPPPPXXXXXXFFXPXXPPPXGGGGG 580
           PPPPP      +  P  PPP    GG
Sbjct: 40  PPPPPPPCGGGYEAPPPPPPPSYAGG 65


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
 Frame = +3

Query: 456 GGGXXXPXPXFFXIFXPPPPP-----XXXXXFFFXPXXPPPXGGGG 578
           G G   P P  F    PPPPP           F  P  PPP  G G
Sbjct: 79  GPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 504 PPPPPXXXXXFFFXPXXPPPXGG 572
           PPPPP         P  PPP GG
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGG 750



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 504 PPPPPXXXXXFFFXPXXPPPXG 569
           PPPPP     F   P  PPP G
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPG 791



 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 504 PPPPPXXXXXFFFXPXXPPPXGGG 575
           PPPPP         P  PPP  GG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGG 767


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 504 PPPPPXXXXXFFFXPXXPPPXGG 572
           PPPPP         P  PPP GG
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGG 750



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 504 PPPPPXXXXXFFFXPXXPPPXG 569
           PPPPP     F   P  PPP G
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPG 791



 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 504 PPPPPXXXXXFFFXPXXPPPXGGG 575
           PPPPP         P  PPP  GG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGG 767


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 504 PPPPPXXXXXFFFXPXXPPPXGG 572
           PPPPP         P  PPP GG
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGG 333



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 504 PPPPPXXXXXFFFXPXXPPPXG 569
           PPPPP     F   P  PPP G
Sbjct: 353 PPPPPPPPGGFKGGPPPPPPPG 374



 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 504 PPPPPXXXXXFFFXPXXPPPXGGG 575
           PPPPP         P  PPP  GG
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGG 350


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 504 PPPPPXXXXXFFFXPXXPPPXGG 572
           PPPPP         P  PPP GG
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPGG 598


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,185,138
Number of Sequences: 27780
Number of extensions: 208940
Number of successful extensions: 959
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)