Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_B20
(738 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.2
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 28 1.2
SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces ... 27 2.8
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 27 3.7
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 26 4.9
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 4.9
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 26 6.4
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 6.4
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 8.5
SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces pomb... 25 8.5
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 25 8.5
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 105 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNHPDVVVQYG 233
R +A Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = -2
Query: 359 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRMVLKDNKTAL 180
K K+ D V K + +S T+ +V + YF PF+ V+ + +K + T
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664
Query: 179 LSASIQASLPSSEIYRQL 126
+ + SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682
>SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 278
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 5/54 (9%)
Frame = -1
Query: 510 GVSPPYFQVNDESQASRLISRHSTHTPLPSSNSP-----PHRRCRHGHKPSHHR 364
GV PP ++ + S PLPS P P + KP HH+
Sbjct: 129 GVPPPGMPYREKEELSSETDESVIDIPLPSEEYPFEDPKPREKKNKSFKPKHHK 182
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 26.6 bits (56), Expect = 3.7
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = -1
Query: 573 PPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPPHRRC 394
P S +PS T S + + ++++S S PL +S SPP R
Sbjct: 578 PDTESHSPSPSATSSIKKNPSSIFRRFSSRRKQNKSST--STLQISAPLETSQSPPTPRT 635
Query: 393 RHGHKP 376
+ HKP
Sbjct: 636 KPSHKP 641
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = -1
Query: 567 LSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPP 406
+SS + S +++ S + G PY N +SR ++ H +PP
Sbjct: 460 VSSSSASRFMSKVSSNLNSGNPTPYNSYNGTPTSSRFVAFFDRHRQESEKATPP 513
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 470 KLRALLVVIPRILRSPPPTHPLIEDV 393
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 475 ITSFAPY*SSFHAYSAPLLQLTPSSKMSS 389
+ SF PY S F A P L ++PS+ +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 147 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 49
L++L +G SPC RL L +++P FW
Sbjct: 21 LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 8.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 335 LVTHKELALKVSSIIGTRVYVFDPSCY 255
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 116
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 477 ESQASRLISRHSTHTPLPSSNSPPHRRCRHGHKPS 373
E+ ASRL+ H T L + P H + H +P+
Sbjct: 77 EALASRLLKGHMTQLSLRTILPPAHTKNLHRQQPT 111
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.4 bits (53), Expect = 8.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -1
Query: 588 APGVKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDES--QASRLI-SRHSTHTPLPSS 418
AP +P AP+ + PSSL PP+ Q +S Q S L+ S+++ P S+
Sbjct: 439 APWQQPAAPQSAPALSMNPSSL-------PPWQQPTQQSAVQPSNLVPSQNAPFIPGTSA 491
Query: 417 NSPP 406
PP
Sbjct: 492 PLPP 495
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,616,918
Number of Sequences: 5004
Number of extensions: 50816
Number of successful extensions: 177
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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