Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_B17
(879 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.057
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997... 35 0.075
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.8
03_01_0515 - 3864796-3865425 30 2.8
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 30 2.8
08_01_0059 - 394001-394708 29 4.9
08_02_1256 + 25645085-25645396 25 5.3
07_01_0080 + 587674-588510 27 6.0
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 6.5
01_01_0046 - 331758-332627 29 6.5
12_02_0299 - 17051570-17052474,17053542-17053755 28 8.6
07_03_1136 + 24218601-24218734,24218769-24219906 28 8.6
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.5 bits (78), Expect = 0.057
Identities = 22/73 (30%), Positives = 23/73 (31%)
Frame = +3
Query: 390 PPPPXXXFFFFXKKKKXRXXPPPPPPXXXXFXXXXPPPXXXXXXXXXXXXXXXNFXXXPP 569
PPPP + PPPPPP PPP PP
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKG-------PPPPPPAKGPPPPPPPKGPSPPPPP 368
Query: 570 PPXXKKXXXXPPP 608
PP KK PPP
Sbjct: 369 PPGGKKGGPPPPP 381
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 450 PPPPPPXXXXFXXXXPPPXXXXXXXXXXXXXXXNFXXXPPPPXXKKXXXXPPP 608
PPPPPP PPP PPPP K PPP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPP-------PKGPPPPPPAKGPPPPPP 358
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 381 KXXPPPPXXXFFFFXKKKKXRXXPPPPPPXXXXFXXXXPPP 503
K PPPP K PPPPPP PPP
Sbjct: 342 KGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
>03_02_0631 +
9969841-9969868,9969965-9970082,9970186-9970828,
9971146-9971935,9972002-9972051,9972618-9972704
Length = 571
Score = 35.1 bits (77), Expect = 0.075
Identities = 20/78 (25%), Positives = 22/78 (28%)
Frame = +3
Query: 375 KKKXXPPPPXXXFFFFXKKKKXRXXPPPPPPXXXXFXXXXPPPXXXXXXXXXXXXXXXNF 554
K PPPP F + P PP PPP +
Sbjct: 40 KSPPAPPPPRPRRAFGTVRSSNAHDAPEKPPPLQKAPKVSPPPPQKPDKVSPPPAQKPSK 99
Query: 555 XXXPPPPXXKKXXXXPPP 608
PPPP K PPP
Sbjct: 100 VSPPPPPPQKSAKVSPPP 117
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = +1
Query: 457 PPPXXXXXFXXXPPPPXXXXXXXXXXXEKKKIFXXXPPPPXKKKXXXXPPP 609
PPP PPP + K+ PPPP +K PPP
Sbjct: 69 PPPLQKAPKVSPPPPQKPDKVSPPPAQKPSKV--SPPPPPPQKSAKVSPPP 117
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/73 (28%), Positives = 23/73 (31%)
Frame = +3
Query: 390 PPPPXXXFFFFXKKKKXRXXPPPPPPXXXXFXXXXPPPXXXXXXXXXXXXXXXNFXXXPP 569
PPPP F F + PPPPP + PPP PP
Sbjct: 62 PPPPHQPQFNFGPGPPQQQQPPPPP--QMYYQPPPPPPPYGVNSSQPP-------PPPPP 112
Query: 570 PPXXKKXXXXPPP 608
PP PPP
Sbjct: 113 PPSPPPSAPPPPP 125
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +3
Query: 450 PPPPPPXXXXFXXXXPPPXXXXXXXXXXXXXXXNFXXXPPPPXXKKXXXXPPP 608
PPPPPP PP PPPP PPP
Sbjct: 602 PPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPP 654
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/73 (26%), Positives = 21/73 (28%)
Frame = +3
Query: 390 PPPPXXXFFFFXKKKKXRXXPPPPPPXXXXFXXXXPPPXXXXXXXXXXXXXXXNFXXXPP 569
PPPP + + PPPP P PPP PP
Sbjct: 570 PPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPP-----PPPPP 624
Query: 570 PPXXKKXXXXPPP 608
PP PPP
Sbjct: 625 PPLPNHSVLPPPP 637
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 450 PPPPPPXXXXFXXXXPPPXXXXXXXXXXXXXXXNFXXXPPPPXXKKXXXXPPP 608
PPPPPP PPP PPPP K PPP
Sbjct: 71 PPPPPPPS---VTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPP 120
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +1
Query: 451 LLPPPXXXXXFXXXPPPPXXXXXXXXXXXEKKKIFXXXPPPPXKKKXXXXPPP 609
L+PPP PPPP PPPP K PPP
Sbjct: 69 LMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPP-PPSPPPPSPVKSSPPPPP 120
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +3
Query: 420 FXKKKKXRXX--PPPPPPXXXXFXXXXPPP 503
F KKK+ PPPPPP + PPP
Sbjct: 100 FKKKKRHHHHHPPPPPPPHLLHYYGHPPPP 129
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 417 FFXKKKKXRXXPPPPPPXXXXFXXXXPPP 503
F KK+ PPPPPP PPP
Sbjct: 100 FKKKKRHHHHHPPPPPPPHLLHYYGHPPP 128
>08_01_0059 - 394001-394708
Length = 235
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 450 PPPPPPXXXXFXXXXPPPXXXXXXXXXXXXXXXNFXXXPPPPXXKKXXXXPPP 608
PPPPPP PPP + PPPP + PPP
Sbjct: 2 PPPPPP------RRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPP 48
>08_02_1256 + 25645085-25645396
Length = 103
Score = 25.4 bits (53), Expect(2) = 5.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 450 PPPPPPXXXXFXXXXPPP 503
PPPPPP PPP
Sbjct: 62 PPPPPPPPLPSPPPPPPP 79
Score = 22.2 bits (45), Expect(2) = 5.3
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 564 PPPPXXKKXXXXPPP 608
PPPP ++ PPP
Sbjct: 75 PPPPPQQQEEQSPPP 89
>07_01_0080 + 587674-588510
Length = 278
Score = 26.6 bits (56), Expect(2) = 6.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 441 RXXPPPPPPXXXXFXXXXPPP 503
R PPPPPP PPP
Sbjct: 90 RPPPPPPPPPSSGSPPPPPPP 110
Score = 26.2 bits (55), Expect(2) = 7.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 441 RXXPPPPPPXXXXFXXXXPPP 503
R PPPPPP PPP
Sbjct: 89 RRPPPPPPPPPSSGSPPPPPP 109
Score = 20.6 bits (41), Expect(2) = 6.0
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = +3
Query: 564 PPPPXXKKXXXXPPP 608
PPPP PPP
Sbjct: 104 PPPPPPPPPPPPPPP 118
Score = 20.6 bits (41), Expect(2) = 7.8
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = +3
Query: 564 PPPPXXKKXXXXPPP 608
PPPP PPP
Sbjct: 105 PPPPPPPPPPPPPPP 119
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/73 (24%), Positives = 20/73 (27%)
Frame = +3
Query: 390 PPPPXXXFFFFXKKKKXRXXPPPPPPXXXXFXXXXPPPXXXXXXXXXXXXXXXNFXXXPP 569
PPPP + PPP PP + PPP PP
Sbjct: 1065 PPPPQRENTSVGIQGGIPPLPPPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPP 1124
Query: 570 PPXXKKXXXXPPP 608
PP PP
Sbjct: 1125 PPIGGLGGHQAPP 1137
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/52 (26%), Positives = 14/52 (26%)
Frame = +3
Query: 453 PPPPPXXXXFXXXXPPPXXXXXXXXXXXXXXXNFXXXPPPPXXKKXXXXPPP 608
PP PP PPP F PPP PPP
Sbjct: 1136 PPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPP 1187
>01_01_0046 - 331758-332627
Length = 289
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/78 (23%), Positives = 22/78 (28%), Gaps = 7/78 (8%)
Frame = +3
Query: 396 PPXXXFFFFXKKKKXRXXPPPPPPXXXXFXXXXPPPXXXXXXXXXXXXXXX-------NF 554
PP +F + PPPPPP + PP
Sbjct: 9 PPQRYWFPYWTSPPPPPPPPPPPPSSSRYRPPSPPSSRHPHPTIPAARAAPPLGPTNRRL 68
Query: 555 XXXPPPPXXKKXXXXPPP 608
PPPP + PPP
Sbjct: 69 HQQPPPPASRDGRHEPPP 86
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +3
Query: 450 PPPPPPXXXXFXXXXPPPXXXXXXXXXXXXXXXNFXXXPPPPXXKKXXXXPP 605
PPPPPP F PP PPPP PP
Sbjct: 289 PPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPP 340
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 607 GGGXXXXFFXXGGGGXXKKXXXXXXXXXXXXXXXXGGGXXXKKXXXXGGGGGGXXL 440
GGG GGGG GGG K GGGGGG L
Sbjct: 191 GGGGPGRAPGGGGGGGGLGGGGGEGGAPERVIGGGGGGGGALKCVVGGGGGGGGAL 246
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,510,941
Number of Sequences: 37544
Number of extensions: 464580
Number of successful extensions: 4084
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3341
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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