Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_B15
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0005 + 11568545-11569119,11569179-11569191                       35   0.073
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275...    31   1.2  
01_01_0083 + 631196-631675                                             30   2.7  
02_05_0002 - 24849189-24849825,24850267-24850328                       29   6.3  
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847...    28   8.4  
04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888     28   8.4  
03_05_0161 + 21400580-21401695                                         28   8.4  
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373...    28   8.4  

>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 35.1 bits (77), Expect = 0.073
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +3

Query: 366 GGGGXXKXPXPPPPRXXKXXXFFFXXXPPPP 458
           GGGG    P PPPP        F+   PPPP
Sbjct: 130 GGGGGGAYPTPPPPNPFLPYFPFYYYSPPPP 160


>07_03_1691 -
           28726307-28726323,28726588-28726953,28727483-28727567,
           28728255-28728387,28729793-28730328
          Length = 378

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +2

Query: 365 GGGGXKXXTPPPPPP 409
           GGGG    TPPPPPP
Sbjct: 35  GGGGGAGPTPPPPPP 49



 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +2

Query: 365 GGGGXKXXTPPPPPP 409
           GGGG     PPPPPP
Sbjct: 36  GGGGAGPTPPPPPPP 50


>01_01_0083 + 631196-631675
          Length = 159

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +3

Query: 366 GGGGXXKXPXPPPPRXXKXXXFFFXXXPPPPP 461
           GGGG    P PPPP        ++   PP  P
Sbjct: 99  GGGGGFNYPAPPPPNPIVPWYPWYYRSPPSSP 130


>02_05_0002 - 24849189-24849825,24850267-24850328
          Length = 232

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +2

Query: 365 GGGGXKXXTPPPPPP 409
           GGGG     PPPPPP
Sbjct: 211 GGGGHPHPPPPPPPP 225


>04_03_0977 +
           21381857-21383757,21384299-21384458,21384669-21384717,
           21385117-21385169
          Length = 720

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +2

Query: 365 GGGGXKXXTPPPPPP 409
           GGGG     PPPPPP
Sbjct: 93  GGGGWVQLPPPPPPP 107


>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
          Length = 213

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +3

Query: 372 GGXXKXPXPPPPRXXKXXXFFFXXXPPP 455
           G   K P PPPP        F+   PPP
Sbjct: 168 GASCKPPPPPPPAIWPPQPSFYYYPPPP 195


>03_05_0161 + 21400580-21401695
          Length = 371

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +2

Query: 365 GGGGXKXXTPPPPPP 409
           G GG    TPPPPPP
Sbjct: 15  GAGGGGTTTPPPPPP 29


>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
            32237909-32239263,32240399-32240460,32240544-32241144,
            32241229-32241310,32241778-32241840
          Length = 1111

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +3

Query: 384  KXPXPPPPRXXKXXXFFFXXXPPPPP 461
            + P PPPP       F     PPPPP
Sbjct: 963  RPPPPPPPPNVAPPPFTRQDIPPPPP 988


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,789,807
Number of Sequences: 37544
Number of extensions: 226886
Number of successful extensions: 3590
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2967
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)