Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_B15
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 1.9
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 1.9
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 5.7
Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 29 5.7
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 5.7
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 28 7.5
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 28 7.5
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 28 7.5
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 28 7.5
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 28 7.5
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 9.9
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 366 GGGGXXKXPXPPPPRXXKXXXFFFXXXPPPPP 461
GG G P PPPP PPPPP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 366 GGGGXXKXPXPPPPRXXKXXXFFFXXXPPPPP 461
GG G P PPPP PPPPP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 365 GGGGXKXXTPPPPPP 409
GGGG PPPPPP
Sbjct: 32 GGGGGGDAAPPPPPP 46
>Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical
protein F46F2.3 protein.
Length = 137
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 365 GGGGXKXXTPPPPPP 409
GGGG PPPPPP
Sbjct: 108 GGGGAYAQAPPPPPP 122
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 365 GGGGXKXXTPPPPPP 409
GGGG PPPPPP
Sbjct: 36 GGGGGGCCAPPPPPP 50
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 365 GGGGXKXXTPPPPPP 409
GGGG PPPPPP
Sbjct: 22 GGGGGGCCAPPPPPP 36
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 420 FXXXGGGGGGVXXFXPPPP 364
F GGGGGG PPPP
Sbjct: 18 FNLLGGGGGGCCAPPPPPP 36
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 365 GGGGXKXXTPPPPPP 409
GGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 365 GGGGXKXXTPPPPPP 409
GGGG PPPPPP
Sbjct: 23 GGGGCGCAPPPPPPP 37
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 365 GGGGXKXXTPPPPPP 409
GGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 365 GGGGXKXXTPPPPPP 409
GGGG PPPPPP
Sbjct: 23 GGGGCGCAPPPPPPP 37
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 365 GGGGXKXXTPPPPPP 409
GGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 365 GGGGXKXXTPPPPPP 409
GGGG PPPPPP
Sbjct: 23 GGGGCGCAPPPPPPP 37
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 365 GGGGXKXXTPPPPPP 409
GGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 365 GGGGXKXXTPPPPPP 409
GGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 420 FXXXGGGGGGVXXFXPPPP 364
F GGGGGG PPPP
Sbjct: 19 FPSAGGGGGGCGCGAPPPP 37
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 390 PXPPPPRXXKXXXFFFXXXPPPPP 461
P PPPP F PPPPP
Sbjct: 56 PVPPPPAYPFAPQVFTQPPPPPPP 79
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 408 GGGGGGVXXFXPPPP 364
GG GGG F PPPP
Sbjct: 202 GGSGGGSGRFPPPPP 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,297,210
Number of Sequences: 27780
Number of extensions: 99009
Number of successful extensions: 1381
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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