Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_B09
(805 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.20
06_03_1172 - 28147957-28148274,28149362-28149877 31 1.1
12_02_1174 - 26696869-26698191 30 1.9
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 30 1.9
09_02_0603 - 11150739-11150746,11150791-11151340 29 5.7
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 7.6
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 28 7.6
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 28 7.6
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 28 10.0
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 28 10.0
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXKXG 352
G PPPPP K PPPPP G GG PP K G
Sbjct: 343 GPPPPPPAKGPPPPPPPKGPSPPPPPPPGG------KKGGPPPPPPKGG 385
Score = 26.2 bits (55), Expect(2) = 1.0
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -2
Query: 492 PPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXK 358
PPPP PPPPP G G PP K
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPK 360
Score = 23.4 bits (48), Expect(2) = 1.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 252 KGKQXXPPXPPGXKXPG 202
KG PP PPG K G
Sbjct: 360 KGPSPPPPPPPGGKKGG 376
>06_03_1172 - 28147957-28148274,28149362-28149877
Length = 277
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXKXXXXXPPPPP 415
G PPPPP F PPPPP
Sbjct: 9 GAPPPPPPSPPSVYPFLPPATFIPPPPP 36
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 599 PXPXXXXPPXXPXXPXXPXPPFXSXXPXXXXPXXXPXLXPXXXPXXXXRXP 751
P P PP P P P PP P P L P P P
Sbjct: 148 PPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRP 198
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/69 (27%), Positives = 19/69 (27%), Gaps = 3/69 (4%)
Frame = +2
Query: 587 PXXXPXPXXXXPPXXPXXPXXPXPPFXSXXPXXXXPXXXP---XLXPXXXPXXXXRXPLX 757
P P P PP P P P P S P P P P P R P
Sbjct: 142 PPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSV 201
Query: 758 XXXXXXPXP 784
P P
Sbjct: 202 KPPVVQPKP 210
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +2
Query: 587 PXXXPXPXXXXPPXXPXXPXXPXPPFXSXXPXXXXPXXXPXLXPXXXPXXXXR 745
P P P PP P P P PP P P P P R
Sbjct: 355 PPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAPPKATMARFPKLSPTESSR 407
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXKXG 352
G PPPPP G PPPPP G PP + G
Sbjct: 42 GFPPPPPPGSTFVPL---PQSGVPPPPPLGSFFVPPPQSRVPPPPPQLG 87
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 492 PPPPPXGXXXXXXFXKXXXXXPPPPP 415
PPPPP F PPPPP
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPPPPPPP 573
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 492 PPPPPXGXXXXXXFXKXXXXXPPPPP 415
PPPPP G PPPPP
Sbjct: 253 PPPPPPGPPPREIVPGQTLLPPPPPP 278
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +2
Query: 587 PXXXPXPXXXXPPXXPXXPXXPXPPFXSXXPXXXXP 694
P P P PP P P P PP P P
Sbjct: 39 PHHHPHPPHHHPPHHPHPPHHPHPPHHPHPPHHPHP 74
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 492 PPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGG 382
PPPPP G K PPPPP G GG
Sbjct: 930 PPPPPPG--------KPGGPPPPPPPPGSLPRNLAGG 958
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +2
Query: 587 PXXXPXPXXXXPPXXPXXPXXPXPPFXSXXPXXXXPXXXPXLXPXXXP 730
P P PP P P P PP P P P P P
Sbjct: 1159 PLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPP 1206
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,277,152
Number of Sequences: 37544
Number of extensions: 402000
Number of successful extensions: 1245
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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