Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_B09
(805 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.55
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.55
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.55
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 0.73
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.97
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.97
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.97
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.3
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 6.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 6.8
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 9.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 9.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -1
Query: 502 GGXPPPPPXGXXXXGXXXXXXXAXPPXPPXGFXXXKXXXGGGXPPXXXXXG 350
GG PPPPP G G PP PP G GG PP G
Sbjct: 724 GGPPPPPPPG----GLPPITGGPPPPPPPGGL----PPISGGPPPPPPPPG 766
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -2
Query: 492 PPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXKXGXF 346
PPPPP G PPPPP GF GG PP G F
Sbjct: 760 PPPPPPGGCPPPP--------PPPPPGGFK-------GGPPPPPPPGMF 793
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXKXG 352
G PPPPP G PPPPP GG PP G
Sbjct: 725 GPPPPPPPGGLPPIT------GGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -1
Query: 502 GGXPPPPPXGXXXXGXXXXXXXAXPPXPPXGFXXXKXXXGGGXPPXXXXXG 350
GG PPPPP G G PP PP G GG PP G
Sbjct: 724 GGPPPPPPPG----GLPPITGGPPPPPPPGGL----PPISGGPPPPPPPPG 766
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -2
Query: 492 PPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXKXGXF 346
PPPPP G PPPPP GF GG PP G F
Sbjct: 760 PPPPPPGGCPPPP--------PPPPPGGFK-------GGPPPPPPPGMF 793
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXKXG 352
G PPPPP G PPPPP GG PP G
Sbjct: 725 GPPPPPPPGGLPPIT------GGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -1
Query: 502 GGXPPPPPXGXXXXGXXXXXXXAXPPXPPXGFXXXKXXXGGGXPPXXXXXG 350
GG PPPPP G G PP PP G GG PP G
Sbjct: 307 GGPPPPPPPG----GLPPITGGPPPPPPPGGL----PPISGGPPPPPPPPG 349
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -2
Query: 492 PPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXKXGXF 346
PPPPP G PPPPP GF GG PP G F
Sbjct: 343 PPPPPPGGCPPPP--------PPPPPGGFK-------GGPPPPPPPGMF 376
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXKXG 352
G PPPPP G PPPPP GG PP G
Sbjct: 308 GPPPPPPPGGLPPIT------GGPPPPPPPGGLPPISGGPPPPPPPPGG 350
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.73
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXKXXXXXPPPPPXG 409
G PPPPP G PPPPP G
Sbjct: 135 GSPPPPPTGEPQDLSGEGNASRRPPPPPKG 164
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXK-XXXXXPPPPPXG 409
G PPPPP G + PPPPP G
Sbjct: 72 GTPPPPPTGEPQDLSAEEGNASRRPPPPPKG 102
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 499 GXPPPPPXGXXXXGXXXXXXXAXPPXPPXG 410
G PPPPP G PP PP G
Sbjct: 41 GTPPPPPTGEPQDLSGEGNASRRPPPPPKG 70
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 499 GXPPPPPXGXXXXGXXXXXXXAXPPXPPXG 410
G PPPPP G PP PP G
Sbjct: 104 GTPPPPPTGEPQDLSGEGNASRRPPPPPKG 133
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 499 GXPPPPPXGXXXXGXXXXXXXAXPPXPPXG 410
G PPPPP G PP PP G
Sbjct: 166 GSPPPPPTGEPQDLSTEGNASRRPPPPPKG 195
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 499 GXPPPPPXGXXXXGXXXXXXXAXPPXPPXG 410
G PPPPP G PP PP G
Sbjct: 197 GTPPPPPTGEPQDLSAEGYASRRPPPPPKG 226
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 499 GXPPPPPXGXXXXGXXXXXXXAXPPXPPXG 410
G PPPPP G PP PP G
Sbjct: 259 GSPPPPPTGEPQDLSGEGNASRRPPPPPKG 288
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPP 367
G PPPPP PPPPP G GG PP
Sbjct: 253 GSPPPPPAAGSPPPP----RTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXKXG 352
G PPPPP G PPPPP G G PP G
Sbjct: 270 GSPPPPPTGS-------------PPPPPAGGSPPPPRAGSPPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPP 367
G PPPPP PPPPP G GG PP
Sbjct: 274 GSPPPPPAAGSPPPP----RTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXKXG 352
G PPPPP G PPPPP G G PP G
Sbjct: 291 GSPPPPPTGS-------------PPPPPAGGSPPPPRAGSPPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPP 367
G PPPPP PPPPP G GG PP
Sbjct: 259 GSPPPPPAAGSPPPP----RTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 498 GXPPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXKXG 352
G PPPPP G PPPPP G G PP G
Sbjct: 276 GSPPPPPTGS-------------PPPPPAGGSPPPPRAGSPPPPPPPRG 311
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 492 PPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPP 367
PPPPP PPPPP G G G PP
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPPPMGL---PAVGAGAPPP 651
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = -2
Query: 492 PPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPP 367
PPPPP PPPPP G PP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 652
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 492 PPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPP 367
PPPPP PPPPP G G G PP
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPPPMGL---PAVGAGAPPP 477
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = -2
Query: 492 PPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPP 367
PPPPP PPPPP G PP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 478
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 368 GGXPPPPXXFXXXKPXGGGGGXXXXXXXXXXXXXXPXGGGGG 493
GG PPP GGGGG GGGGG
Sbjct: 107 GGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGG 148
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 368 GGXPPPPXXFXXXKPXGGGGGXXXXXXXXXXXXXXPXGGGGG 493
GG PPP GGGGG GGGGG
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG 91
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -2
Query: 492 PPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXKXG 352
PPPPP G PPPPP G GG PP G
Sbjct: 299 PPPPPPGRTPGPP---GMPGMPPPPPPS--RFGPPGMGGMPPPPPPG 340
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -2
Query: 492 PPPPPXGXXXXXXFXKXXXXXPPPPPXGFXXXXXXGGGGXPPXXKXG 352
PPPPP G PPPPP G GG PP G
Sbjct: 309 PPPPPPGRTPGPP---GMPGMPPPPPPS--RFGPPGMGGMPPPPPPG 350
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 502 GGXPPPPPXGXXXXGXXXXXXXAXPPXPP 416
GG PPPP G A PP PP
Sbjct: 670 GGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 502 GGXPPPPPXGXXXXGXXXXXXXAXPPXPP 416
GG PPPP G A PP PP
Sbjct: 670 GGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,689,865
Number of Sequences: 27780
Number of extensions: 234703
Number of successful extensions: 750
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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