Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_B07
(795 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.025
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.025
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.025
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 34 0.10
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 34 0.13
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 34 0.13
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.24
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.31
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 32 0.41
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 32 0.41
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 32 0.41
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 32 0.41
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 32 0.41
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 32 0.41
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 32 0.41
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 32 0.54
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.54
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 1.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.3
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 30 1.7
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 30 1.7
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 30 1.7
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 30 1.7
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.9
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 29 2.9
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 2.9
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 2.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 2.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 2.9
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 29 3.8
U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen prot... 29 3.8
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 29 3.8
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 3.8
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen prot... 29 5.1
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 29 5.1
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 28 6.7
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 6.7
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 6.7
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 28 6.7
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 28 6.7
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 6.7
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 6.7
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 28 6.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 6.7
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 8.9
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 8.9
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 28 8.9
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 8.9
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 8.9
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 8.9
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 28 8.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.025
Identities = 22/65 (33%), Positives = 22/65 (33%)
Frame = +3
Query: 462 PPPXXPXXLLAXRXXPXPGAXXGPLXXXGGGPXXPGGXXPPXSGXXXXXXPRPXGGPLXX 641
PPP P P PG P G P P G PP SG P P G P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGL--PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 642 APXXP 656
P P
Sbjct: 773 PPPPP 777
Score = 31.9 bits (69), Expect = 0.54
Identities = 26/95 (27%), Positives = 27/95 (28%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPL 622
PP PP P P PP GG SGG PP PP P P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG--PPPPPPPPGGCPPP- 771
Query: 623 RXSXPXRPXXXGXXLXXGPXGVLLPGXXXXPXVAP 727
P G P G+ P P P
Sbjct: 772 -PPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLP 805
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.025
Identities = 22/65 (33%), Positives = 22/65 (33%)
Frame = +3
Query: 462 PPPXXPXXLLAXRXXPXPGAXXGPLXXXGGGPXXPGGXXPPXSGXXXXXXPRPXGGPLXX 641
PPP P P PG P G P P G PP SG P P G P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGL--PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 642 APXXP 656
P P
Sbjct: 773 PPPPP 777
Score = 31.9 bits (69), Expect = 0.54
Identities = 26/95 (27%), Positives = 27/95 (28%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPL 622
PP PP P P PP GG SGG PP PP P P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG--PPPPPPPPGGCPPP- 771
Query: 623 RXSXPXRPXXXGXXLXXGPXGVLLPGXXXXPXVAP 727
P G P G+ P P P
Sbjct: 772 -PPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLP 805
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.025
Identities = 22/65 (33%), Positives = 22/65 (33%)
Frame = +3
Query: 462 PPPXXPXXLLAXRXXPXPGAXXGPLXXXGGGPXXPGGXXPPXSGXXXXXXPRPXGGPLXX 641
PPP P P PG P G P P G PP SG P P G P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGL--PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 642 APXXP 656
P P
Sbjct: 356 PPPPP 360
Score = 31.9 bits (69), Expect = 0.54
Identities = 26/95 (27%), Positives = 27/95 (28%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPL 622
PP PP P P PP GG SGG PP PP P P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG--PPPPPPPPGGCPPP- 354
Query: 623 RXSXPXRPXXXGXXLXXGPXGVLLPGXXXXPXVAP 727
P G P G+ P P P
Sbjct: 355 -PPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLP 388
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = -1
Query: 618 GXGXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXGAGGRXXG 445
G G GG GG PP PPP GG G G G G GG G
Sbjct: 38 GGGGCGGGGGCGGGCAPP----PPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG 91
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = -1
Query: 645 GRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXG 466
G G G G GG GG PP PPP GG G G G G
Sbjct: 86 GGGGGGCGGGGGGCGGGGGCGGGCAPP---PPPPACGGGCGGGGGGCGGGCGGGGGGGCG 142
Query: 465 AGG 457
GG
Sbjct: 143 GGG 145
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = -1
Query: 618 GXGXXXGGXXTAGGXXPPEXXAPPPXP--XGGPXXXPGAXXDXXXGAXXGXXGAGGRXXG 445
G G GG GG APPP P GG G G G G GG G
Sbjct: 89 GGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGG-GGGGGCGGGGGG 147
Query: 444 G 442
G
Sbjct: 148 G 148
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/93 (26%), Positives = 27/93 (29%), Gaps = 2/93 (2%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXG-PPXGXGGGAXXSGGXXPPAVXXPPXXXPXP 619
PP PP P P AP P G PP G G G P + P P
Sbjct: 476 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPPVPLPTDLP 535
Query: 620 LRXSXP-XRPXXXGXXLXXGPXGVLLPGXXXXP 715
+ P G GP G G P
Sbjct: 536 IPSESPSFFQWIFGRPKPSGPAGPAPSGEPPGP 568
Score = 32.3 bits (70), Expect = 0.41
Identities = 23/87 (26%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXP--X 616
PP PP P P AP P G P G + PP+ P P
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 430
Query: 617 PLRXSXPXRPXXXGXXLXXGPXGVLLP 697
P P G GP G P
Sbjct: 431 PPSGGPPGPFNPSGAPPSGGPPGPFNP 457
Score = 32.3 bits (70), Expect = 0.41
Identities = 23/87 (26%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXP--X 616
PP PP P P AP P G P G + PP+ P P
Sbjct: 416 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 475
Query: 617 PLRXSXPXRPXXXGXXLXXGPXGVLLP 697
P P G GP G P
Sbjct: 476 PPSGGPPGPFDPSGAPPSGGPPGPFNP 502
Score = 31.9 bits (69), Expect = 0.54
Identities = 23/87 (26%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXP--X 616
PP PP P P AP P G P G + PP+ P P
Sbjct: 191 PPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 250
Query: 617 PLRXSXPXRPXXXGXXLXXGPXGVLLP 697
P P G GP G P
Sbjct: 251 PPSGGPPGPFNPSGAPPSGGPPGPFDP 277
Score = 31.9 bits (69), Expect = 0.54
Identities = 23/87 (26%), Positives = 24/87 (27%), Gaps = 2/87 (2%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXP--X 616
PP PP P P AP P G P G PP+ P P
Sbjct: 236 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 295
Query: 617 PLRXSXPXRPXXXGXXLXXGPXGVLLP 697
P P G GP G P
Sbjct: 296 PPSGGPPGPFDPSGAQPSGGPPGPFNP 322
Score = 31.9 bits (69), Expect = 0.54
Identities = 23/87 (26%), Positives = 24/87 (27%), Gaps = 2/87 (2%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXP--X 616
PP PP P P AP P G P G PP+ P P
Sbjct: 326 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 385
Query: 617 PLRXSXPXRPXXXGXXLXXGPXGVLLP 697
P P G GP G P
Sbjct: 386 PPSGGPPGPFDPSGAPPSGGPPGPFNP 412
Score = 31.1 bits (67), Expect = 0.95
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXP 613
PP PP P P AP P G P G + PP+ P P
Sbjct: 461 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 517
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/88 (28%), Positives = 26/88 (29%), Gaps = 3/88 (3%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAP-GXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXP-- 613
PP PP P P AP P PP G G G PP+ P P
Sbjct: 176 PPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSG-APPSGGPPGPFNPSG 234
Query: 614 XPLRXSXPXRPXXXGXXLXXGPXGVLLP 697
P P G GP G P
Sbjct: 235 APPSGGPPGPFDPSGAPPSGGPPGPFNP 262
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 2/86 (2%)
Frame = +2
Query: 446 PXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXP--XP 619
P PP P P AP P G P G + PP+ P P P
Sbjct: 312 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAP 371
Query: 620 LRXSXPXRPXXXGXXLXXGPXGVLLP 697
P G GP G P
Sbjct: 372 PSGGPPGPFDPSGAPPSGGPPGPFDP 397
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/87 (25%), Positives = 24/87 (27%), Gaps = 2/87 (2%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXP--X 616
PP PP P P AP P G G + PP+ P P
Sbjct: 281 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 340
Query: 617 PLRXSXPXRPXXXGXXLXXGPXGVLLP 697
P P G GP G P
Sbjct: 341 PPSGGPPGPFNPSGAPPSGGPPGPFDP 367
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/66 (36%), Positives = 24/66 (36%), Gaps = 9/66 (13%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPG--------XXXGPPXGXG-GGAXXSGGXXPPAVXX 595
PP PP P P AP S PG GPP G GA SGG PP
Sbjct: 146 PPSGGPPGPFDPSGAP--PSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGG--PPGPFN 201
Query: 596 PPXXXP 613
P P
Sbjct: 202 PSEAPP 207
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/97 (30%), Positives = 33/97 (34%), Gaps = 11/97 (11%)
Frame = -1
Query: 714 GXXXXPGRXTPXGPXXRXXPXXX-GRXGXDXRRGXGXXXG------GXXTAGGXXPP-EX 559
G PGR P GP P G+ G D + G G G G PP +
Sbjct: 187 GPAGQPGRNGPDGPNGEPGPKGPPGQPGADGQPGMPGEPGKDAPQEGSPVPGDPGPPGDS 246
Query: 558 XAP-PPXPXG--GPXXXPGAXXDXXXGAXXGXXGAGG 457
P PP P G GP PG G GA G
Sbjct: 247 GIPGPPGPPGMAGPDGIPGMGGAKGQNGPDGPPGASG 283
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.24
Identities = 23/91 (25%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Frame = +2
Query: 329 VAPXXXXXXPXXXXSSXGXPGXKSXXXXXXXXXXXXXXPPXXRPPAPXXPXXAPXXXS-X 505
V P P G PG P PP P P AP
Sbjct: 144 VVPTPCKPCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPGPPGPKGPRGAPGNSGRA 203
Query: 506 XAPGXXXGPPXGXGGGAXXSGGXXPPAVXXP 598
APG G GGG G P P
Sbjct: 204 GAPGQPGNDAHGYGGGVGAPGPAGPRGAPGP 234
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = -1
Query: 618 GXGXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXGAGGRXXG 445
G G GG GG APPP P GG G G G G GG G
Sbjct: 56 GGGCGGGGGGCGGGGG----CAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG 109
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -1
Query: 612 GXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXGAGG 457
G GG +A PP PPP P P G + G G +GG
Sbjct: 288 GSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGG 339
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -1
Query: 618 GXGXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXGAGGRXXGG 442
G G G GG APPP P GG G G GG GG
Sbjct: 28 GGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGG 86
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +2
Query: 446 PXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGG 571
P PP P P P + G G GGG+ SGG
Sbjct: 298 PAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGG 339
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = -1
Query: 618 GXGXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXGAGGRXXG 445
G G GG GG APPP P GG G G G G GG G
Sbjct: 56 GGGCGGGGGGCGGGGG----CAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG 109
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -1
Query: 612 GXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXGAGG 457
G GG +A PP PPP P P G + G G +GG
Sbjct: 288 GSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGG 339
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -1
Query: 618 GXGXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXGAGGRXXGG 442
G G G GG APPP P GG G G GG GG
Sbjct: 28 GGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGG 86
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +2
Query: 446 PXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGG 571
P PP P P P + G G GGG+ SGG
Sbjct: 298 PAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGG 339
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.31
Identities = 23/81 (28%), Positives = 24/81 (29%)
Frame = +3
Query: 405 PPXXXXXXXXXXXXPXXALPPPXXPXXLLAXRXXPXPGAXXGPLXXXGGGPXXPGGXXPP 584
PP P + PP A PG G GGP PG PP
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP 426
Query: 585 XSGXXXXXXPRPXGGPLXXAP 647
G P P GGP P
Sbjct: 427 QGGPGGFGPP-PPGGPGAYGP 446
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = -3
Query: 655 GXXGAXXXGPPXGRGXXXXXXPDXGGXXPPGXXGPPPXXXRGPXXAPGXGXXRXARSXXG 476
G G PP G G P GG PG GPPP G P G G
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQGG---PGGFGPPPPGGPGAYGPPPTGFPPVGAPPPG 460
Query: 475 XXG 467
G
Sbjct: 461 AAG 463
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +3
Query: 507 PXPGAXXGPLXXXGGGPXXPGGXXPPXSGXXXXXXPRPXGGPLXXAP 647
P PG P G PGG PP G P P G P AP
Sbjct: 412 PPPGGPGAP-GSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAP 457
Score = 28.7 bits (61), Expect = 5.1
Identities = 27/96 (28%), Positives = 28/96 (29%), Gaps = 1/96 (1%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPL 622
PP PP AP + AP GP G G GG P PP P
Sbjct: 381 PPQSGPPGAF----APPPSAFGAPQGPGGP---GGYGPPPPGGPGAPGSYGPPQGGPGGF 433
Query: 623 RXSXPXRPXXXG-XXLXXGPXGVLLPGXXXXPXVAP 727
P P G P G PG P P
Sbjct: 434 GPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNP 469
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/116 (22%), Positives = 32/116 (27%)
Frame = +3
Query: 285 TSIREVGDEAPERRGWPPXXXPXSRXXXSLPXXXXGRSLPPPXXXXXXXXXXXXPXXALP 464
T +++ G P++ G PP P S P + P P P
Sbjct: 280 TPVQQQGFAPPQQFGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPP 339
Query: 465 PPXXPXXLLAXRXXPXPGAXXGPLXXXGGGPXXPGGXXPPXSGXXXXXXPRPXGGP 632
P P P P P GG PP S P P GP
Sbjct: 340 QGGPPQGSFGA---PPPQQFHAP------SPQSFGGPPPPVSSAPGNFAPPPQSGP 386
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +2
Query: 512 PGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPLRXSXPXRPXXXGXXLXXGPXGVL 691
P GPP GGG G PP + P P P P G G G
Sbjct: 348 PKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPG-- 405
Query: 692 LPG 700
LPG
Sbjct: 406 LPG 408
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +2
Query: 512 PGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPLRXSXPXRPXXXGXXLXXGPXGVL 691
P GPP GGG G PP + P P P P G G G
Sbjct: 347 PKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPG-- 404
Query: 692 LPG 700
LPG
Sbjct: 405 LPG 407
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +2
Query: 512 PGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPLRXSXPXRPXXXGXXLXXGPXGVL 691
P GPP GGG G PP + P P P P G G G
Sbjct: 347 PKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPG-- 404
Query: 692 LPG 700
LPG
Sbjct: 405 LPG 407
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +2
Query: 512 PGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPLRXSXPXRPXXXGXXLXXGPXGVL 691
P GPP GGG G PP + P P P P G G G
Sbjct: 348 PKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPG-- 405
Query: 692 LPG 700
LPG
Sbjct: 406 LPG 408
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +2
Query: 512 PGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPLRXSXPXRPXXXGXXLXXGPXGVL 691
P GPP GGG G PP + P P P P G G G
Sbjct: 384 PKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPG-- 441
Query: 692 LPG 700
LPG
Sbjct: 442 LPG 444
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +2
Query: 512 PGXXXGPPXGXGGGAXXSGGXXPPAVXXPP 601
PG GPP G GGG G PPA PP
Sbjct: 621 PGGGGGPPRGPGGGG-GGGPTGPPAPPKPP 649
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 546 GGGPXXPGGXXPPXSGXXXXXXPRPXGGPLXXAP 647
GGGP PGG P G P G P P
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKP 648
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +2
Query: 512 PGXXXGPPXGXGGGAXXSGGXXPPAVXXPP 601
PG GPP G GGG G PPA PP
Sbjct: 621 PGGGGGPPRGPGGGG-GGGPTGPPAPPKPP 649
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 546 GGGPXXPGGXXPPXSGXXXXXXPRPXGGPLXXAP 647
GGGP PGG P G P G P P
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKP 648
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.9 bits (69), Expect = 0.54
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 3/105 (2%)
Frame = +3
Query: 327 GWPPXXXPXSRXXXSLPXXXXGRSLPPPXXXXXXXXXXXXPXXALPPPXXPXXLLAXRXX 506
G PP P + S+ G PPP P P P L+
Sbjct: 108 GVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQA----PQGMFNVPTGPPPLMGGGGD 163
Query: 507 PX--PGAXXGPLXXXG-GGPXXPGGXXPPXSGXXXXXXPRPXGGP 632
P PG GP G GGP GG P P GGP
Sbjct: 164 PRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP 208
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +3
Query: 507 PXPGAXXGPLXXXG-GGPXXPGGXXPPXSGXXXXXXPRPXGGP 632
P G GP G GGP GG P G P GGP
Sbjct: 175 PGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 217
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.9 bits (69), Expect = 0.54
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 3/105 (2%)
Frame = +3
Query: 327 GWPPXXXPXSRXXXSLPXXXXGRSLPPPXXXXXXXXXXXXPXXALPPPXXPXXLLAXRXX 506
G PP P + S+ G PPP P P P L+
Sbjct: 388 GVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQA----PQGMFNVPTGPPPLMGGGGD 443
Query: 507 PX--PGAXXGPLXXXG-GGPXXPGGXXPPXSGXXXXXXPRPXGGP 632
P PG GP G GGP GG P P GGP
Sbjct: 444 PRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP 488
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +3
Query: 507 PXPGAXXGPLXXXG-GGPXXPGGXXPPXSGXXXXXXPRPXGGP 632
P G GP G GGP GG P G P GGP
Sbjct: 455 PGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 497
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -3
Query: 646 GAXXXGPPXGRGXXXXXXPDXGGXXPPGXXGPP-PXXXRGPXXAPG 512
G GPP G P GG P G GPP P G APG
Sbjct: 185 GPGPAGPP-GPAGADGNTPSGGGEGPAGPPGPPGPAGNPGTDGAPG 229
Score = 29.1 bits (62), Expect = 3.8
Identities = 26/99 (26%), Positives = 27/99 (27%), Gaps = 4/99 (4%)
Frame = +2
Query: 458 PPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPLRXSXP 637
PP P P P P GP G G GG P PP P P
Sbjct: 176 PPGPAGPAGGP------GPAGPPGPA-GADGNTPSGGGEGPAGPPGPPGPAGNPGTDGAP 228
Query: 638 XRPXXXGXXL----XXGPXGVLLPGXXXXPXVAPXXAAS 742
P G GP G P P P A +
Sbjct: 229 GNPGAPGQVTETPGTPGPAGAAGPPGPPGPAGNPGSAGA 267
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/79 (29%), Positives = 24/79 (30%)
Frame = -1
Query: 696 GRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXX 517
G P GP P G G D G G G P A PP P GP
Sbjct: 205 GGEGPAGPPG--PPGPAGNPGTDGAPGNPGAPGQVTETPGTPGPAGAAGPPGPP-GPAGN 261
Query: 516 PGAXXDXXXGAXXGXXGAG 460
PG+ G AG
Sbjct: 262 PGSAGASEPGPAGPAGDAG 280
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/65 (29%), Positives = 22/65 (33%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPL 622
PP PP P P +P +P PP +G PP PP P P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSP---PPPPAAGSPPPPRTGSPPPPPTGSPP---PPPA 285
Query: 623 RXSXP 637
S P
Sbjct: 286 GGSPP 290
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/84 (27%), Positives = 25/84 (29%), Gaps = 2/84 (2%)
Frame = +3
Query: 447 PXXALPPPXXPXXLLAXRXXPXPGAXXGPLXXXGGGPXXPGGXXPPXSGXXXXXXPRPXG 626
P PP P + P P A P G P P G PP PR
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 627 GPLXXAP--XXPXXSWXXVRAGXS 692
P P P S +AG S
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGS 320
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 585 AGGXXPPEXXAPPPXPXGGPXXXP 514
AG PP +PPP P G P P
Sbjct: 261 AGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 582 GGXXPPEXXAPPPXPXGGPXXXPGA 508
G PP +PPP P GG P A
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRA 294
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/65 (29%), Positives = 22/65 (33%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPL 622
PP PP P P +P +P PP +G PP PP P P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSP---PPPPAAGSPPPPRTGSPPPPPTGSPP---PPPA 306
Query: 623 RXSXP 637
S P
Sbjct: 307 GGSPP 311
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/84 (27%), Positives = 25/84 (29%), Gaps = 2/84 (2%)
Frame = +3
Query: 447 PXXALPPPXXPXXLLAXRXXPXPGAXXGPLXXXGGGPXXPGGXXPPXSGXXXXXXPRPXG 626
P PP P + P P A P G P P G PP PR
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 627 GPLXXAP--XXPXXSWXXVRAGXS 692
P P P S +AG S
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGS 341
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 585 AGGXXPPEXXAPPPXPXGGPXXXP 514
AG PP +PPP P G P P
Sbjct: 282 AGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 582 GGXXPPEXXAPPPXPXGGPXXXPGA 508
G PP +PPP P GG P A
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRA 315
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/65 (29%), Positives = 22/65 (33%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPL 622
PP PP P P +P +P PP +G PP PP P P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSP---PPPPAAGSPPPPRTGSPPPPPTGSPP---PPPA 291
Query: 623 RXSXP 637
S P
Sbjct: 292 GGSPP 296
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/84 (27%), Positives = 25/84 (29%), Gaps = 2/84 (2%)
Frame = +3
Query: 447 PXXALPPPXXPXXLLAXRXXPXPGAXXGPLXXXGGGPXXPGGXXPPXSGXXXXXXPRPXG 626
P PP P + P P A P G P P G PP PR
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 627 GPLXXAP--XXPXXSWXXVRAGXS 692
P P P S +AG S
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGS 326
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 585 AGGXXPPEXXAPPPXPXGGPXXXP 514
AG PP +PPP P G P P
Sbjct: 267 AGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 582 GGXXPPEXXAPPPXPXGGPXXXPGA 508
G PP +PPP P GG P A
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRA 300
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 458 PPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPP 583
PP P P AP S P GPP G G +G P
Sbjct: 179 PPGPPGPDGAPGGGSGPGPAGPAGPP-GPDGNPGSAGADGQP 219
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 458 PPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPP 583
PP P P AP S P GPP G G +G P
Sbjct: 179 PPGPPGPDGAPGGGSGPGPAGPAGPP-GPDGNPGSAGADGQP 219
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/87 (27%), Positives = 26/87 (29%), Gaps = 1/87 (1%)
Frame = -1
Query: 714 GXXXXPGRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPP-PXP 538
G PG P GP GR G R G G T P PP P
Sbjct: 169 GRKGPPG--PPGGPGGPGEGGDGGRPGNPGRPGPAGPRGEPGTEYKPGQPGRPGPPGPRG 226
Query: 537 XGGPXXXPGAXXDXXXGAXXGXXGAGG 457
GP PG+ + G G G
Sbjct: 227 EAGPAGQPGSPGNDGESGKPGNAGRPG 253
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = +2
Query: 512 PGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPLRXSXPXRPXXXGXXLXXGPXG 685
PG GP G GG + G PA P + P RP G GP G
Sbjct: 177 PGGPGGPGEGGDGGRPGNPGRPGPA--GPRGEPGTEYKPGQPGRPGPPGPRGEAGPAG 232
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 30.3 bits (65), Expect = 1.7
Identities = 30/110 (27%), Positives = 33/110 (30%), Gaps = 5/110 (4%)
Frame = -1
Query: 768 PXGXXRXRXXAAXXGATXGXXXXPGRXTPXGPXX-RXXPXXXGRXGXDXRRGXGXXXGGX 592
P G R + G G GR P GP + P G G G G
Sbjct: 139 PPGCPGPRGPSGLVGPA-GPAGDQGRHGPPGPTGGQGGPGEQGDAGRPGAAGCPGPPGPR 197
Query: 591 XTAGGXXPP--EXXAPPPXPXG--GPXXXPGAXXDXXXGAXXGXXGAGGR 454
G P A PP P G GP PG + G G GR
Sbjct: 198 GEPGTEYRPGQAGRAGPPGPRGPPGPEGNPGGAGEDGNQGPVGHPGVPGR 247
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/93 (26%), Positives = 28/93 (30%), Gaps = 2/93 (2%)
Frame = -1
Query: 726 GATXGXXXXPGRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPP 547
GA G P P P G+ G + G G G P P
Sbjct: 226 GAPGAPGQSGGSALPGPPGPAGSPGRSGQPGSNGNVGAPGAPGQVVDVPGAPGPAGPPGP 285
Query: 546 PXPXGGPXXXPGAXXDXXXGA--XXGXXGAGGR 454
P P G P PG GA G GA G+
Sbjct: 286 PGPSGAP-GHPGQAGSSLPGAPGPQGDAGAPGQ 317
Score = 28.3 bits (60), Expect = 6.7
Identities = 28/109 (25%), Positives = 31/109 (28%), Gaps = 4/109 (3%)
Frame = -1
Query: 768 PXGXXRXRXXAAXXGATX--GXXXXPGRXTPXG-PXXRXXPXXXGRXGXDXRRGXGXXX- 601
P G + + GA G PG P G P P G G G
Sbjct: 215 PSGAPGQKGPSGAPGAPGQSGGSALPGPPGPAGSPGRSGQPGSNGNVGAPGAPGQVVDVP 274
Query: 600 GGXXTAGGXXPPEXXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXGAGGR 454
G AG PP P P PGA G GA G+
Sbjct: 275 GAPGPAGPPGPPGPSGAPGHPGQAGSSLPGAPGPQGDAGAPGQPGAPGQ 323
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -1
Query: 687 TPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXXPG 511
+P P P G G G G AG PE AP P GP PG
Sbjct: 179 SPAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGPAGPPG 237
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/94 (24%), Positives = 23/94 (24%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPL 622
P PP P P GP G PA P P P
Sbjct: 180 PAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGPAGPPGPD 239
Query: 623 RXSXPXRPXXXGXXLXXGPXGVLLPGXXXXPXVA 724
S P G GP G PG P A
Sbjct: 240 GASPTAAPGAAGPPGPPGPAGA--PGPDGNPGTA 271
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/92 (26%), Positives = 24/92 (26%), Gaps = 2/92 (2%)
Frame = -1
Query: 735 AXXGATXGXXXXPGRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTA--GGXXPPE 562
A G PG P G P G G G G TA G PP
Sbjct: 195 AGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAGPPG 254
Query: 561 XXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXG 466
P P GP PG G G
Sbjct: 255 PPGPAGAP--GPDGNPGTAGPPGKAGGEGEKG 284
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = -1
Query: 714 GXXXXPGRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPXPX 535
G G P GP R P GR G R G G T G P P
Sbjct: 164 GSDGQSGNEGPTGP--RGSPGNKGRDGNPGRDGSPGRPGRDGTRGVGQPGSPGQPGSRGP 221
Query: 534 GGPXXXPG 511
GP PG
Sbjct: 222 EGPRGQPG 229
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 3/79 (3%)
Frame = -1
Query: 684 PXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAP-PPXPXG--GPXXXP 514
P P P G G G G G P E P P P G GP P
Sbjct: 171 PGAPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGQP 230
Query: 513 GAXXDXXXGAXXGXXGAGG 457
GA G G G
Sbjct: 231 GAPGQPGHDGQPGAPGPKG 249
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 3/79 (3%)
Frame = -1
Query: 684 PXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAP-PPXPXG--GPXXXP 514
P P P G G G G G P E P P P G GP P
Sbjct: 171 PGAPGNDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPP 230
Query: 513 GAXXDXXXGAXXGXXGAGG 457
GA G G G
Sbjct: 231 GAPGQPGHDGQPGAPGPKG 249
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 3/79 (3%)
Frame = -1
Query: 684 PXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAP-PPXPXG--GPXXXP 514
P P P G G G G G P E P P P G GP P
Sbjct: 171 PGAPGNDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPP 230
Query: 513 GAXXDXXXGAXXGXXGAGG 457
GA G G G
Sbjct: 231 GAPGQPGHDGQPGAPGPKG 249
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = -3
Query: 685 PARTXXQXXXGXXGAXXXGPPXGRGXXXXXXPDXGGXXPPGXXGPP-PXXXRGPXXAPGX 509
P + G GA P GR D PPG GP +GP PG
Sbjct: 126 PGPDGQEGSNGRPGAPGTNGPDGRPATQASASDFCFDCPPGPPGPAGSIGPKGPNGNPGF 185
Query: 508 GXXRXARSXXGXXGG 464
A G GG
Sbjct: 186 DGQPGAPGNNGFAGG 200
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 3/79 (3%)
Frame = -1
Query: 684 PXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAP-PPXPXG--GPXXXP 514
P P P G G G G G P E P P P G GP P
Sbjct: 171 PGAPGNDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPP 230
Query: 513 GAXXDXXXGAXXGXXGAGG 457
GA G G G
Sbjct: 231 GAPGQPGHDGQPGAPGPKG 249
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 3/79 (3%)
Frame = -1
Query: 684 PXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAP-PPXPXG--GPXXXP 514
P P P G G G G G P E P P P G GP P
Sbjct: 171 PGAPGNDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPP 230
Query: 513 GAXXDXXXGAXXGXXGAGG 457
GA G G G
Sbjct: 231 GAPGQPGHDGQPGAPGPKG 249
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/103 (25%), Positives = 28/103 (27%)
Frame = +3
Query: 324 RGWPPXXXPXSRXXXSLPXXXXGRSLPPPXXXXXXXXXXXXPXXALPPPXXPXXLLAXRX 503
RG P S P G + P P LPPP + R
Sbjct: 1514 RGMPSPMMRGSSMRGGFPQRGGGPGMGPSQYYHDSPQNRGPPMGGLPPPHG--GMNGWRG 1571
Query: 504 XPXPGAXXGPLXXXGGGPXXPGGXXPPXSGXXXXXXPRPXGGP 632
P P GP G PP G P P GGP
Sbjct: 1572 GPPPPRGGSHCQ----GPPPLMGGPPPRLGMPPPGPPPPNGGP 1610
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = -3
Query: 655 GXXGAXXXGPPXGRGXXXXXXPDXGGXXPPGXXGPP-PXXXRGPXXAPG 512
G G P G D G PPG GPP P G APG
Sbjct: 184 GPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPG 232
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/58 (39%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = -3
Query: 631 GPPXGRGXXXXXXPDXGGXX-PPGXXGPP-PXXXRGPXXAPG-XGXXRXARSXXGXXG 467
GPP G G P GG PPG GPP G PG G R A S G G
Sbjct: 157 GPPGGPGELGG--PGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPG 212
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/58 (39%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = -3
Query: 631 GPPXGRGXXXXXXPDXGGXX-PPGXXGPP-PXXXRGPXXAPG-XGXXRXARSXXGXXG 467
GPP G G P GG PPG GPP G PG G R A S G G
Sbjct: 157 GPPGGPGELGG--PGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPG 212
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/89 (24%), Positives = 24/89 (26%)
Frame = -1
Query: 726 GATXGXXXXPGRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPP 547
GA G P P P G+ G + G G G P P
Sbjct: 192 GAPGAPGQSGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGP 251
Query: 546 PXPXGGPXXXPGAXXDXXXGAXXGXXGAG 460
P P G P PG G AG
Sbjct: 252 PGPAGAP-GQPGQSGSAQPGGPGPQGDAG 279
>U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical
protein F54D8.6 protein.
Length = 783
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -3
Query: 628 PPXGRGXXXXXXPDXGGXXPPGXXGPPPXXXRGPXXAPGXGXXRXARSXXGXXGGGRAXX 449
PP G P GG PG PP RG PG G R G G +
Sbjct: 573 PPGGDSRGVDRPPGGGGI--PGVDRPPGGGRRGVDRPPGSGMPGIDRPPGGDRMGDKQRR 630
Query: 448 G 446
G
Sbjct: 631 G 631
>AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen protein
107, isoform a protein.
Length = 256
Score = 29.1 bits (62), Expect = 3.8
Identities = 28/97 (28%), Positives = 28/97 (28%), Gaps = 7/97 (7%)
Frame = -1
Query: 726 GATXGXXXXPGRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXT-------AGGXXP 568
G T G P P GP P G G D G GG AGG
Sbjct: 77 GGTCGCGAQPNNC-PAGPAG--PPGAPGAPGEDGTPGQAGKNGGNGIGIVNSADAGGCIK 133
Query: 567 PEXXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXGAGG 457
P P GP PGA G GA G
Sbjct: 134 CPAGEPGPAGPDGPAGAPGADGQPGAPGNAGQDGAPG 170
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 29.1 bits (62), Expect = 3.8
Identities = 28/97 (28%), Positives = 28/97 (28%), Gaps = 7/97 (7%)
Frame = -1
Query: 726 GATXGXXXXPGRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXT-------AGGXXP 568
G T G P P GP P G G D G GG AGG
Sbjct: 77 GGTCGCGAQPNNC-PAGPAG--PPGAPGAPGEDGTPGQAGKNGGNGIGIVNSADAGGCIK 133
Query: 567 PEXXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXGAGG 457
P P GP PGA G GA G
Sbjct: 134 CPAGEPGPAGPDGPAGAPGADGQPGAPGNAGQDGAPG 170
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/86 (27%), Positives = 27/86 (31%)
Frame = -1
Query: 714 GXXXXPGRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPXPX 535
G PG G R P GR G +G G +GG P PP
Sbjct: 185 GHPGSPGNPGRGGQRSRGTPGASGRPGP---QGPAGAPGQPGRSGGAGTPGPQGPP---- 237
Query: 534 GGPXXXPGAXXDXXXGAXXGXXGAGG 457
GP PG + G GA G
Sbjct: 238 -GPSGQPGHSGNDGVPGTPGNPGAPG 262
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/85 (27%), Positives = 25/85 (29%)
Frame = -1
Query: 714 GXXXXPGRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPXPX 535
G PG P GP P G+ G + G G G P PP P
Sbjct: 197 GGASLPGPPGPAGP-----PGPSGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGPPGPA 251
Query: 534 GGPXXXPGAXXDXXXGAXXGXXGAG 460
G P PG G AG
Sbjct: 252 GAP-GQPGQSGSGQPGGPGPQGDAG 275
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = +2
Query: 464 APXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPLRXSXPXR 643
AP P AP APG P G GGA G PP P P + P +
Sbjct: 165 APAGPPGAPGQAG--APGNDGRP--GQSGGAAIPGPPGPPGPSGQPGQDGHPGQDGQPGQ 220
Query: 644 P 646
P
Sbjct: 221 P 221
>AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen protein
72 protein.
Length = 205
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/76 (25%), Positives = 20/76 (26%)
Frame = +2
Query: 458 PPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPLRXSXP 637
PP P P P P G P G G G P P P + P
Sbjct: 51 PPVPTRPRGQPGYGGPPGPPGLPGQP-GQNGNGGRPGNNGPMGQPGEPGREGQPGKAGGP 109
Query: 638 XRPXXXGXXLXXGPXG 685
P G G G
Sbjct: 110 GSPGRDGIRGSKGSTG 125
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/85 (27%), Positives = 24/85 (28%)
Frame = +2
Query: 461 PAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPLRXSXPX 640
P P P P GPP G A GG PP PP P +
Sbjct: 172 PGPQGPSGPPGPPGQPGQPGQRGPPGEPG--ALLPGGDAPPGPSGPPGRPGAPGQPGKAG 229
Query: 641 RPXXXGXXLXXGPXGVLLPGXXXXP 715
P G G G PG P
Sbjct: 230 SPGQDGSNGDAGVAGE--PGQRGPP 252
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = -1
Query: 687 TPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXXPG 511
+P P P G G G G AG PE P P GP PG
Sbjct: 180 SPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAGESTYPEPAGPGPAGPPGPAGPPG 238
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/94 (24%), Positives = 23/94 (24%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPL 622
P PP P P GP G PA P P P
Sbjct: 181 PAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAGESTYPEPAGPGPAGPPGPAGPPGPD 240
Query: 623 RXSXPXRPXXXGXXLXXGPXGVLLPGXXXXPXVA 724
S P G GP G PG P A
Sbjct: 241 GASPTAAPGAAGPPGPPGPAGA--PGPDGNPGTA 272
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/92 (26%), Positives = 24/92 (26%), Gaps = 2/92 (2%)
Frame = -1
Query: 735 AXXGATXGXXXXPGRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTA--GGXXPPE 562
A G PG P G P G G G G TA G PP
Sbjct: 196 AGPAGNDGAAGTPGPDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGAAGPPG 255
Query: 561 XXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXG 466
P P GP PG G G
Sbjct: 256 PPGPAGAP--GPDGNPGTAGPPGKAGGEGEKG 285
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/71 (32%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = +2
Query: 509 APGXXXGP--PXGXGGGAXXSGGXXPPAVXXPPXXXPXPLRXSXPXRPXXXGXXLXXGPX 682
APG GP P G G GG PP P P + P P G G
Sbjct: 146 APGQP-GPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPG---KSGQR 201
Query: 683 GVLLPGXXXXP 715
G LPG P
Sbjct: 202 GRGLPGPSGAP 212
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -1
Query: 612 GXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXXPGAXXDXXXGAXXGXXGAGG 457
G GG A PP AP P P P P A G GG
Sbjct: 31 GGGGGGGDAAPPPPPPADAAPAPAPAPEPEAAPAAPAADAGGYAAAASAGGG 82
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -3
Query: 655 GXXGAXXXGPPXGRGXXXXXXP--DXGGXXPPGXXGPPPXXXRGPXXAPG 512
G GA G P G P G PG GP P +GP A G
Sbjct: 207 GEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAG 256
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/83 (28%), Positives = 26/83 (31%), Gaps = 6/83 (7%)
Frame = +2
Query: 458 PPAPXXPXXAPXXXSXXAPGXXX--GPPXGXG----GGAXXSGGXXPPAVXXPPXXXPXP 619
P AP P P PG GPP G GA +GG P PP P
Sbjct: 200 PGAPGGPGE-PGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Query: 620 LRXSXPXRPXXXGXXLXXGPXGV 688
P P G G G+
Sbjct: 259 GADGNPGGPGTAGKPGGEGEKGI 281
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -3
Query: 655 GXXGAXXXGPPXGRGXXXXXXP--DXGGXXPPGXXGPPPXXXRGPXXAPG 512
G GA G P G P G PG GP P +GP A G
Sbjct: 207 GEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAG 256
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/83 (28%), Positives = 26/83 (31%), Gaps = 6/83 (7%)
Frame = +2
Query: 458 PPAPXXPXXAPXXXSXXAPGXXX--GPPXGXG----GGAXXSGGXXPPAVXXPPXXXPXP 619
P AP P P PG GPP G GA +GG P PP P
Sbjct: 200 PGAPGGPGE-PGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Query: 620 LRXSXPXRPXXXGXXLXXGPXGV 688
P P G G G+
Sbjct: 259 GADGNPGGPGTAGKPGGEGEKGI 281
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/86 (24%), Positives = 24/86 (27%)
Frame = -1
Query: 714 GXXXXPGRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPXPX 535
G PG G + P G G G G G P P P
Sbjct: 193 GAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSP--GQPGPKGP 250
Query: 534 GGPXXXPGAXXDXXXGAXXGXXGAGG 457
GP PGA + G G+ G
Sbjct: 251 NGPDGQPGADGNPGAPGPAGPPGSPG 276
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = -1
Query: 696 GRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXX 517
G+ P P GR G RG AG PP PP GP
Sbjct: 172 GQGGPGEQGDAGRPGAAGRPGPPGPRGEPGTEYRPGQAGRAGPPGPRGPP-----GPEGN 226
Query: 516 PGAXXDXXXGAXXGXXGAGGR 454
PG + G G GR
Sbjct: 227 PGGAGEDGNQGPVGHPGVPGR 247
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -3
Query: 655 GXXGAXXXGPPXGRGXXXXXXP--DXGGXXPPGXXGPPPXXXRGPXXAPG 512
G GA G P G P G PG GP P +GP A G
Sbjct: 207 GEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAG 256
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/83 (28%), Positives = 26/83 (31%), Gaps = 6/83 (7%)
Frame = +2
Query: 458 PPAPXXPXXAPXXXSXXAPGXXX--GPPXGXG----GGAXXSGGXXPPAVXXPPXXXPXP 619
P AP P P PG GPP G GA +GG P PP P
Sbjct: 200 PGAPGGPGE-PGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Query: 620 LRXSXPXRPXXXGXXLXXGPXGV 688
P P G G G+
Sbjct: 259 GADGNPGGPGTAGKPGGEGEKGI 281
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -3
Query: 655 GXXGAXXXGPPXGRGXXXXXXP--DXGGXXPPGXXGPPPXXXRGPXXAPG 512
G GA G P G P G PG GP P +GP A G
Sbjct: 207 GEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAG 256
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/83 (28%), Positives = 26/83 (31%), Gaps = 6/83 (7%)
Frame = +2
Query: 458 PPAPXXPXXAPXXXSXXAPGXXX--GPPXGXG----GGAXXSGGXXPPAVXXPPXXXPXP 619
P AP P P PG GPP G GA +GG P PP P
Sbjct: 200 PGAPGGPGE-PGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Query: 620 LRXSXPXRPXXXGXXLXXGPXGV 688
P P G G G+
Sbjct: 259 GADGNPGGPGTAGKPGGEGEKGI 281
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/86 (24%), Positives = 24/86 (27%)
Frame = -1
Query: 714 GXXXXPGRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPXPX 535
G PG G + P G G G G G P P P
Sbjct: 193 GAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSP--GQPGPKGP 250
Query: 534 GGPXXXPGAXXDXXXGAXXGXXGAGG 457
GP PGA + G G+ G
Sbjct: 251 NGPDGQPGADGNPGAPGPAGPPGSPG 276
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +3
Query: 447 PXXALPPPXXPXXLLAXRXX--PXPGAXXGPLXXXGGGPXXPGGXXPPXSGXXXXXXPRP 620
P ++PPP LLA P P PL G P PP G P P
Sbjct: 537 PVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
Query: 621 XG 626
G
Sbjct: 597 GG 598
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 446 PXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGG 571
P PPA P P G G G GGG GG
Sbjct: 66 PCPAPPAAYCPQVQPVYVQSGGGGCGGGGCGGGGGGCGGGGG 107
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/86 (26%), Positives = 24/86 (27%)
Frame = -1
Query: 714 GXXXXPGRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPXPX 535
G PG P GP G+ G R G G G P P P
Sbjct: 194 GHPGKPGSQGPPGPPGHSDEPKPGQPGQPGRAGPRGPRGVAGIKGKDGAPGSPG-QPGPR 252
Query: 534 GGPXXXPGAXXDXXXGAXXGXXGAGG 457
GGP PG G G G
Sbjct: 253 GGP-GEPGQDGAPGQPGLPGSDGTPG 277
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXA-PGXXXGP-PXGXGGGAXXSGGXXPPAVXXPP 601
P PP P P AP PG P P G G SG PP P
Sbjct: 218 PGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTP 272
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 27.9 bits (59), Expect = 8.9
Identities = 25/82 (30%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Frame = -1
Query: 696 GRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPX---PXG-- 532
G P P P G+ G G G TA P E PPP P G
Sbjct: 102 GCCLPGPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTA----PCEPTTPPPCKPCPQGPP 157
Query: 531 GPXXXPGAXXDXXXGAXXGXXG 466
GP PGA D G G
Sbjct: 158 GPPGPPGAPGDPGEAGTPGRPG 179
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = -3
Query: 571 PPGXXGPP----PXXXRGPXXAPGXGXXRXARSXXGXXG 467
PPG GPP P GP APG +R G G
Sbjct: 163 PPGPAGPPGGPGPPGPPGPEGAPGEDGNTPSRGGVGEAG 201
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/79 (29%), Positives = 24/79 (30%)
Frame = -1
Query: 696 GRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPXPXGGPXXX 517
G P GP P G G D G G G P A PP P GP
Sbjct: 198 GEAGPPGP-----PGTSGNPGTDGAPGNPGAPGQVTETPGTPGPAGAAGPPGPP-GPAGN 251
Query: 516 PGAXXDXXXGAXXGXXGAG 460
PG+ G AG
Sbjct: 252 PGSAGASEPGPAGPAGDAG 270
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = +2
Query: 443 PPXXRPPAPXXPXXAPXXXSXXA-PGXXXGP-PXGXGGGAXXSGGXXPPAVXXPP 601
P PP P P AP PG P P G G SG PP P
Sbjct: 218 PGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTP 272
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +2
Query: 446 PXXRPPAPXXPXXAPXXXSXXAPGXXXGPPXGXGGGAXXSGGXXPPAVXXPPXXXPXPLR 625
P P A P AP AP P G GGA PPA P P
Sbjct: 333 PEAAPAAAAAPQPAP------APAAAAAPAGGYQGGAAAGAAAPPPAPAAAAAPEPAPAP 386
Query: 626 XSXP 637
+ P
Sbjct: 387 AAAP 390
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 27.9 bits (59), Expect = 8.9
Identities = 25/82 (30%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Frame = -1
Query: 696 GRXTPXGPXXRXXPXXXGRXGXDXRRGXGXXXGGXXTAGGXXPPEXXAPPPX---PXG-- 532
G P P P G+ G G G TA P E PPP P G
Sbjct: 102 GCCLPGPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTA----PCEPTTPPPCKPCPQGPP 157
Query: 531 GPXXXPGAXXDXXXGAXXGXXG 466
GP PGA D G G
Sbjct: 158 GPPGPPGAPGDPGEAGTPGRPG 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,046,919
Number of Sequences: 27780
Number of extensions: 187513
Number of successful extensions: 1747
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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