Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_B06
         (1208 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   1.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   4.4  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 803 PPPPPPPP 780
           PPPPPPPP
Sbjct: 783 PPPPPPPP 790



 Score = 26.6 bits (56), Expect = 1.5
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 803 PPPPPPPP 780
           PPPPPPPP
Sbjct: 784 PPPPPPPP 791



 Score = 25.0 bits (52), Expect = 4.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 814 GXXXPPPPPPP 782
           G   PPPPPPP
Sbjct: 779 GIGSPPPPPPP 789



 Score = 25.0 bits (52), Expect = 4.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 814 GXXXPPPPPPP 782
           G   PPPPPPP
Sbjct: 781 GSPPPPPPPPP 791


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 4.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 814 GXXXPPPPPPP 782
           G   PPPPPPP
Sbjct: 526 GPLGPPPPPPP 536


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 4.4
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 757 KXFFXXXXGGGGGGGG 804
           K  F    GGGGGGGG
Sbjct: 521 KVTFQIPNGGGGGGGG 536


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 267,846
Number of Sequences: 2352
Number of extensions: 4994
Number of successful extensions: 419
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 137338992
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)