Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_B06
         (1208 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82269-5|CAH60772.1|  618|Caenorhabditis elegans Hypothetical pr...    28   0.25 
AL021487-15|CAH60766.1|  618|Caenorhabditis elegans Hypothetical...    28   0.25 
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    27   0.51 
U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical pr...    27   1.2  
U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical pr...    27   3.5  

>Z82269-5|CAH60772.1|  618|Caenorhabditis elegans Hypothetical
           protein Y45F10B.13b protein.
          Length = 618

 Score = 27.9 bits (59), Expect(2) = 0.25
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 866 KKKKKKKXXXXXXXXXXXXXXPPPPPPPP 780
           KK+ K++              PPPPPPPP
Sbjct: 230 KKEPKQQDHVVPEPPREKSVPPPPPPPPP 258



 Score = 24.6 bits (51), Expect(2) = 0.25
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 800 PPPPPPPXXXK 768
           PPPPPPP   K
Sbjct: 250 PPPPPPPPPPK 260


>AL021487-15|CAH60766.1|  618|Caenorhabditis elegans Hypothetical
           protein Y45F10B.13b protein.
          Length = 618

 Score = 27.9 bits (59), Expect(2) = 0.25
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 866 KKKKKKKXXXXXXXXXXXXXXPPPPPPPP 780
           KK+ K++              PPPPPPPP
Sbjct: 230 KKEPKQQDHVVPEPPREKSVPPPPPPPPP 258



 Score = 24.6 bits (51), Expect(2) = 0.25
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 800 PPPPPPPXXXK 768
           PPPPPPP   K
Sbjct: 250 PPPPPPPPPPK 260


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 26.6 bits (56), Expect(2) = 0.51
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 803  PPPPPPPP 780
            PPPPPPPP
Sbjct: 1338 PPPPPPPP 1345



 Score = 24.6 bits (51), Expect(2) = 0.51
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 800  PPPPPPPXXXKK 765
            PPPPPPP    K
Sbjct: 1356 PPPPPPPPTMSK 1367


>U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical
           protein R144.4b protein.
          Length = 362

 Score = 26.6 bits (56), Expect(2) = 1.2
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 803 PPPPPPPP 780
           PPPPPPPP
Sbjct: 155 PPPPPPPP 162



 Score = 23.4 bits (48), Expect(2) = 1.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 800 PPPPPPPXXXKKKXF 756
           P PPPPP   +K  F
Sbjct: 171 PTPPPPPPAQQKPSF 185


>U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical
           protein R144.4a protein.
          Length = 360

 Score = 26.6 bits (56), Expect(2) = 3.5
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 803 PPPPPPPP 780
           PPPPPPPP
Sbjct: 155 PPPPPPPP 162



 Score = 21.8 bits (44), Expect(2) = 3.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 800 PPPPPPPXXXKK 765
           P PPPPP   +K
Sbjct: 171 PTPPPPPPAQQK 182


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,537,843
Number of Sequences: 27780
Number of extensions: 139377
Number of successful extensions: 5922
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1831
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3328592102
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)