Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_B04
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.058
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.058
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.058
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.076
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.076
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.31
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.31
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.31
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.31
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.31
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.41
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 3.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 6.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 6.6
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 6.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 6.6
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.058
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Frame = +2
Query: 563 PXXXPPSXXXPPXXPRXXXXXXPXXXPX-GXPXXDXPVPXXXXPXXXPRXXPPPXXRXXX 739
P PP P P P P G P P P P P PPP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP----PPPRTGSPPPPPTGSPPPPPAGGS 288
Query: 740 PXXRXGXXPXPPPXPK 787
P P PPP P+
Sbjct: 289 PPPPRAGSPPPPPPPR 304
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/83 (25%), Positives = 21/83 (25%)
Frame = +2
Query: 539 PPXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXXPXGXPXXDXPVPXXXXPXXXPRXXPP 718
PP P PP PP P P P P P P P
Sbjct: 256 PPPPAAGSPP--PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
Query: 719 PXXRXXXPXXRXGXXPXPPPXPK 787
P P P PPP K
Sbjct: 314 PPQAGGSPPPAGTGSPPPPPRQK 336
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.058
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Frame = +2
Query: 563 PXXXPPSXXXPPXXPRXXXXXXPXXXPX-GXPXXDXPVPXXXXPXXXPRXXPPPXXRXXX 739
P PP P P P P G P P P P P PPP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP----PPPRTGSPPPPPTGSPPPPPAGGS 309
Query: 740 PXXRXGXXPXPPPXPK 787
P P PPP P+
Sbjct: 310 PPPPRAGSPPPPPPPR 325
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/83 (25%), Positives = 21/83 (25%)
Frame = +2
Query: 539 PPXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXXPXGXPXXDXPVPXXXXPXXXPRXXPP 718
PP P PP PP P P P P P P P
Sbjct: 277 PPPPAAGSPP--PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
Query: 719 PXXRXXXPXXRXGXXPXPPPXPK 787
P P P PPP K
Sbjct: 335 PPQAGGSPPPAGTGSPPPPPRQK 357
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.058
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Frame = +2
Query: 563 PXXXPPSXXXPPXXPRXXXXXXPXXXPX-GXPXXDXPVPXXXXPXXXPRXXPPPXXRXXX 739
P PP P P P P G P P P P P PPP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP----PPPRTGSPPPPPTGSPPPPPAGGS 294
Query: 740 PXXRXGXXPXPPPXPK 787
P P PPP P+
Sbjct: 295 PPPPRAGSPPPPPPPR 310
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/83 (25%), Positives = 21/83 (25%)
Frame = +2
Query: 539 PPXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXXPXGXPXXDXPVPXXXXPXXXPRXXPP 718
PP P PP PP P P P P P P P
Sbjct: 262 PPPPAAGSPP--PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
Query: 719 PXXRXXXPXXRXGXXPXPPPXPK 787
P P P PPP K
Sbjct: 320 PPQAGGSPPPAGTGSPPPPPRQK 342
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.076
Identities = 24/80 (30%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Frame = +2
Query: 542 PXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXX-PXGXPXXDXPVPXXXXPXXXPRXXPP 718
P P PPS PP P P G P P P P PP
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP---PP 366
Query: 719 PXXRXXXPXXRXGXXPXPPP 778
P R P G P PPP
Sbjct: 367 PPSRPPAPPSGHGMIPPPPP 386
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = +2
Query: 530 PXXPPXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXXPXGXPXXDXPVPXXXXPXXXPRX 709
P PP P PP P PR P P P P P
Sbjct: 261 PPVPPPPPSVTPMP-PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG---PPGMPGM 316
Query: 710 XPPPXXRXXXPXXRXGXXPXPPP 778
PPP P G P PPP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPP 339
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/98 (25%), Positives = 27/98 (27%)
Frame = +2
Query: 485 PXXXXPXXGVSXRXXPXXPPXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXXPXGXPXXD 664
P P G++ R P PP P PP P P G P
Sbjct: 274 PPPMPPTPGMTPRPPP--PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 331
Query: 665 XPVPXXXXPXXXPRXXPPPXXRXXXPXXRXGXXPXPPP 778
P P PPP P G P PPP
Sbjct: 332 GMPPPPPPGMRYPGGMPPPPP-PRYPSAGPGMYPPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.076
Identities = 24/80 (30%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Frame = +2
Query: 542 PXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXX-PXGXPXXDXPVPXXXXPXXXPRXXPP 718
P P PPS PP P P G P P P P PP
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP---PP 376
Query: 719 PXXRXXXPXXRXGXXPXPPP 778
P R P G P PPP
Sbjct: 377 PPSRPPAPPSGHGMIPPPPP 396
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = +2
Query: 530 PXXPPXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXXPXGXPXXDXPVPXXXXPXXXPRX 709
P PP P PP P PR P P P P P
Sbjct: 271 PPVPPPPPSVTPMP-PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG---PPGMPGM 326
Query: 710 XPPPXXRXXXPXXRXGXXPXPPP 778
PPP P G P PPP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPP 349
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/98 (25%), Positives = 27/98 (27%)
Frame = +2
Query: 485 PXXXXPXXGVSXRXXPXXPPXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXXPXGXPXXD 664
P P G++ R P PP P PP P P G P
Sbjct: 284 PPPMPPTPGMTPRPPP--PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 341
Query: 665 XPVPXXXXPXXXPRXXPPPXXRXXXPXXRXGXXPXPPP 778
P P PPP P G P PPP
Sbjct: 342 GMPPPPPPGMRYPGGMPPPPP-PRYPSAGPGMYPPPPP 378
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/82 (30%), Positives = 25/82 (30%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRG 604
G GGG G C G GGG G G G G G G G G
Sbjct: 102 GCGGGGGGC---GGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGG 158
Query: 603 XXGGXXXEGGXXXGXXXXXXGG 538
GG GG G GG
Sbjct: 159 GGGGCGGGGGGGCGGGSSGGGG 180
Score = 32.7 bits (71), Expect = 0.31
Identities = 26/85 (30%), Positives = 26/85 (30%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRG 604
G GGG G C G GGG G G G G G G G G
Sbjct: 82 GCGGGGGGC----GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 137
Query: 603 XXGGXXXEGGXXXGXXXXXXGGXXG 529
GG GG G GG G
Sbjct: 138 GCGG-GSSGGCGGGSSGGCGGGGGG 161
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/85 (27%), Positives = 23/85 (27%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRG 604
G GG G C GGG G G G G G G G G
Sbjct: 64 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGG 123
Query: 603 XXGGXXXEGGXXXGXXXXXXGGXXG 529
GG GG G G G
Sbjct: 124 CGGGGGGCGGGGGGGCGGGSSGGCG 148
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/85 (27%), Positives = 23/85 (27%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRG 604
G GGG G G GGG G G G G G G G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 603 XXGGXXXEGGXXXGXXXXXXGGXXG 529
G GG G GG G
Sbjct: 145 GGCGGGSSGGCGGGGGGGCGGGGGG 169
Score = 28.7 bits (61), Expect = 5.0
Identities = 30/123 (24%), Positives = 31/123 (25%), Gaps = 1/123 (0%)
Frame = -3
Query: 783 GXGGGXGXCPX-RXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXR 607
G GGG G P G GGG G G G G G
Sbjct: 41 GCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGC--- 97
Query: 606 GXXGGXXXEGGXXXGXXXXXXGGXXGXXRXXTPXXGXXXXGXXXGXXXXXXXXXTXPTXG 427
G GG GG G GG G G G G + G
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGG 157
Query: 426 XGG 418
GG
Sbjct: 158 GGG 160
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/83 (26%), Positives = 22/83 (26%)
Frame = -3
Query: 777 GGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRGXX 598
GGG G C G GG G G G G G G G
Sbjct: 133 GGGGGGCGGGSSGGCGGGSSGGCGGGGG-GGCGGGGGGGCGGGSSGGGGYAVAPSGGGGC 191
Query: 597 GGXXXEGGXXXGXXXXXXGGXXG 529
GG GG GG G
Sbjct: 192 GGGGSSGGGGYAVAPSGGGGCGG 214
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/82 (30%), Positives = 25/82 (30%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRG 604
G GGG G C G GGG G G G G G G G G
Sbjct: 102 GCGGGGGGC---GGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGG 158
Query: 603 XXGGXXXEGGXXXGXXXXXXGG 538
GG GG G GG
Sbjct: 159 GGGGCGGGGGGGCGGGSSGGGG 180
Score = 32.7 bits (71), Expect = 0.31
Identities = 26/85 (30%), Positives = 26/85 (30%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRG 604
G GGG G C G GGG G G G G G G G G
Sbjct: 82 GCGGGGGGC----GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 137
Query: 603 XXGGXXXEGGXXXGXXXXXXGGXXG 529
GG GG G GG G
Sbjct: 138 GCGG-GSSGGCGGGSSGGCGGGGGG 161
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/85 (27%), Positives = 23/85 (27%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRG 604
G GG G C GGG G G G G G G G G
Sbjct: 64 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGG 123
Query: 603 XXGGXXXEGGXXXGXXXXXXGGXXG 529
GG GG G G G
Sbjct: 124 CGGGGGGCGGGGGGGCGGGSSGGCG 148
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/85 (27%), Positives = 23/85 (27%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRG 604
G GGG G G GGG G G G G G G G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 603 XXGGXXXEGGXXXGXXXXXXGGXXG 529
G GG G GG G
Sbjct: 145 GGCGGGSSGGCGGGGGGGCGGGGGG 169
Score = 28.7 bits (61), Expect = 5.0
Identities = 30/123 (24%), Positives = 31/123 (25%), Gaps = 1/123 (0%)
Frame = -3
Query: 783 GXGGGXGXCPX-RXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXR 607
G GGG G P G GGG G G G G G
Sbjct: 41 GCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGC--- 97
Query: 606 GXXGGXXXEGGXXXGXXXXXXGGXXGXXRXXTPXXGXXXXGXXXGXXXXXXXXXTXPTXG 427
G GG GG G GG G G G G + G
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGG 157
Query: 426 XGG 418
GG
Sbjct: 158 GGG 160
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/83 (26%), Positives = 22/83 (26%)
Frame = -3
Query: 777 GGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRGXX 598
GGG G C G GG G G G G G G G
Sbjct: 133 GGGGGGCGGGSSGGCGGGSSGGCGGGGG-GGCGGGGGGGCGGGSSGGGGYAVAPSGGGGC 191
Query: 597 GGXXXEGGXXXGXXXXXXGGXXG 529
GG GG GG G
Sbjct: 192 GGGGSSGGGGYAVAPSGGGGCGG 214
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRG 604
G GGG G C G GGG G G G G G G G G
Sbjct: 121 GCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGG 180
Query: 603 XXGGXXXEG 577
GG G
Sbjct: 181 GGGGGCGGG 189
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/85 (28%), Positives = 24/85 (28%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRG 604
G GGG G C G GGG G G G G G G
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGG 83
Query: 603 XXGGXXXEGGXXXGXXXXXXGGXXG 529
GG GG G GG G
Sbjct: 84 GCGGGG--GGCGGGGGGCGGGGGCG 106
Score = 27.9 bits (59), Expect = 8.8
Identities = 25/85 (29%), Positives = 25/85 (29%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRG 604
G GGG G C G GGG G G G G G G G
Sbjct: 64 GCGGGGGGC----GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACG 119
Query: 603 XXGGXXXEGGXXXGXXXXXXGGXXG 529
GG GG G GG G
Sbjct: 120 --GGCGGGGGGCGGGCGGGGGGGCG 142
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +2
Query: 593 PPXXPRXXXXXXPXXXPXGXPXXDXPVPXXXXPXXXPRXXPPPXXRXXXPXXRXGXXPXP 772
PP P P P G P P+ P P PP P G P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLP----PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 773 PPXP 784
PP P
Sbjct: 772 PPPP 775
Score = 32.3 bits (70), Expect = 0.41
Identities = 23/81 (28%), Positives = 23/81 (28%), Gaps = 1/81 (1%)
Frame = +2
Query: 539 PPXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXXPXGXPXXDX-PVPXXXXPXXXPRXXP 715
PP PP P P P P G P P P P P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 716 PPXXRXXXPXXRXGXXPXPPP 778
PP P G P PPP
Sbjct: 774 PPP-----PGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +2
Query: 593 PPXXPRXXXXXXPXXXPXGXPXXDXPVPXXXXPXXXPRXXPPPXXRXXXPXXRXGXXPXP 772
PP P P P G P P+ P P PP P G P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLP----PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 773 PPXP 784
PP P
Sbjct: 772 PPPP 775
Score = 32.3 bits (70), Expect = 0.41
Identities = 23/81 (28%), Positives = 23/81 (28%), Gaps = 1/81 (1%)
Frame = +2
Query: 539 PPXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXXPXGXPXXDX-PVPXXXXPXXXPRXXP 715
PP PP P P P P G P P P P P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 716 PPXXRXXXPXXRXGXXPXPPP 778
PP P G P PPP
Sbjct: 774 PPP-----PGGFKGGPPPPPP 789
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 32.7 bits (71), Expect = 0.31
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = -3
Query: 777 GGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRGXX 598
GGG G G GGG G G G G G G G G
Sbjct: 98 GGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDW 157
Query: 597 GGXXXEGGXXXGXXXXXXGGXXG 529
GG G G GG G
Sbjct: 158 GGNGGGGRGGGGGRGGGGGGGAG 180
Score = 28.7 bits (61), Expect = 5.0
Identities = 26/89 (29%), Positives = 26/89 (29%), Gaps = 4/89 (4%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXP----XGXXXGXXXX 616
G GGG G G R GGG G G G G G G
Sbjct: 41 GGGGGPGGWGNNGGGGWGR--GGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGG 98
Query: 615 KXRGXXGGXXXEGGXXXGXXXXXXGGXXG 529
RG GG GG G GG G
Sbjct: 99 GGRGDWGGNNNGGGGNWGGGGNNDGGWGG 127
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +2
Query: 593 PPXXPRXXXXXXPXXXPXGXPXXDXPVPXXXXPXXXPRXXPPPXXRXXXPXXRXGXXPXP 772
PP P P P G P P+ P P PP P G P P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLP----PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 773 PPXP 784
PP P
Sbjct: 355 PPPP 358
Score = 32.3 bits (70), Expect = 0.41
Identities = 23/81 (28%), Positives = 23/81 (28%), Gaps = 1/81 (1%)
Frame = +2
Query: 539 PPXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXXPXGXPXXDX-PVPXXXXPXXXPRXXP 715
PP PP P P P P G P P P P P P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 716 PPXXRXXXPXXRXGXXPXPPP 778
PP P G P PPP
Sbjct: 357 PPP-----PGGFKGGPPPPPP 372
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 0.41
Identities = 27/96 (28%), Positives = 28/96 (29%)
Frame = +2
Query: 500 PXXGVSXRXXPXXPPXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXXPXGXPXXDXPVPX 679
P G P PP PP PP PR P P P P P
Sbjct: 113 PQHGDHEASPPPPPPPRKSRAGGSSPP----PPPPPRVPRTPPPRSPPPRRPPMTPPSP- 167
Query: 680 XXXPXXXPRXXPPPXXRXXXPXXRXGXXPXPPPXPK 787
PR P P R R P PPP P+
Sbjct: 168 ---QRRPPRTPPSPEPRN---PPRTPPSPIPPPPPR 197
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/74 (28%), Positives = 21/74 (28%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTGXSXXGXPXGXXXGXXXXKXRG 604
G GGG G G GG G G G G G G RG
Sbjct: 63 GWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRG 122
Query: 603 XXGGXXXEGGXXXG 562
GG GG G
Sbjct: 123 GGGGGRGGGGRGRG 136
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/84 (27%), Positives = 24/84 (28%), Gaps = 2/84 (2%)
Frame = -3
Query: 783 GXGGGXGXCPXRXXGXXXRXXGGGXXRGXXFGXXXXGTG--XSXXGXPXGXXXGXXXXKX 610
G GG G G GGG G +G G G G G G
Sbjct: 89 GFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYG 148
Query: 609 RGXXGGXXXEGGXXXGXXXXXXGG 538
G GG GG G GG
Sbjct: 149 MGGYGGGGGGGGDFGGYGGGGMGG 172
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/94 (24%), Positives = 24/94 (25%), Gaps = 2/94 (2%)
Frame = +2
Query: 509 GVSXRXXPXXPPXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXXPXGXPXXDXPV--PXX 682
G S P PP P+ PP P P P P
Sbjct: 548 GASSYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHA 607
Query: 683 XXPXXXPRXXPPPXXRXXXPXXRXGXXPXPPPXP 784
P P PPP P P PPP P
Sbjct: 608 VPPPPPP---PPPQSFGMAPISSAAPPPPPPPPP 638
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/94 (24%), Positives = 24/94 (25%), Gaps = 2/94 (2%)
Frame = +2
Query: 509 GVSXRXXPXXPPXXXXXXPXXXPPSXXXPPXXPRXXXXXXPXXXPXGXPXXDXPV--PXX 682
G S P PP P+ PP P P P P
Sbjct: 374 GASSYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHA 433
Query: 683 XXPXXXPRXXPPPXXRXXXPXXRXGXXPXPPPXP 784
P P PPP P P PPP P
Sbjct: 434 VPPPPPP---PPPQSFGMAPISSAAPPPPPPPPP 464
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +2
Query: 647 GXPXXDXPVPXXXXPXXXPRXXPPPXXRXXXPXXRXGXXP-XPPPXP 784
G P P+P P P P P P R P PPP P
Sbjct: 67 GRPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRP 113
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +2
Query: 647 GXPXXDXPVPXXXXPXXXPRXXPPPXXRXXXPXXRXGXXP-XPPPXP 784
G P P+P P P P P P R P PPP P
Sbjct: 289 GRPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRP 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,358,803
Number of Sequences: 27780
Number of extensions: 101008
Number of successful extensions: 636
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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