Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_B01
         (760 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z81503-1|CAB04111.1|  305|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 15/44 (34%), Positives = 15/44 (34%)
 Frame = +3

Query: 390 PXPXAXXFXXGGPXGPPXXXXVXX*XFXXGXXXSPXRXPPPPPP 521
           P P       GGP  PP            G    P   PPPPPP
Sbjct: 539 PPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPP 582


>AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical
           protein Y53H1A.1 protein.
          Length = 613

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 6/62 (9%)
 Frame = +1

Query: 493 PRGXPPPPXR---XXXXXPSPXXXPXXGVXGXXGXXPXXXXLXGPPR---GGPXSXXLXP 654
           PRG PPPP +        P P      G  G     P      GPPR    GP      P
Sbjct: 96  PRGYPPPPPQGADTWRGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGPPGPHRPP 155

Query: 655 XH 660
            H
Sbjct: 156 EH 157


>Z81503-1|CAB04111.1|  305|Caenorhabditis elegans Hypothetical
           protein F14F7.1 protein.
          Length = 305

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/70 (27%), Positives = 21/70 (30%)
 Frame = -3

Query: 593 GXXPXXPXTPXXGKXXGDG*XXXXRXGGGGXPRGXXXXTXGKXSXXNXXXRXGPXGXXXX 414
           G  P  P  P  G+   DG       GGG  PR       G         R G  G    
Sbjct: 154 GGRPGPPGPP--GRPGSDGQPGRPATGGGAAPRPGPPGPKGPRGAPGNSGRAGAPGQPGN 211

Query: 413 EXXGXXXGXG 384
           +  G   G G
Sbjct: 212 DAHGYGGGVG 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,619,230
Number of Sequences: 27780
Number of extensions: 208332
Number of successful extensions: 1214
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)