Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_A11
(778 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 273 2e-74
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 191 1e-49
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 191 1e-49
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 190 3e-49
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 188 6e-49
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 118 9e-28
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 86 6e-18
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 78 2e-15
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 34 0.020
SPAC26H5.06 |pot1||telomere end-binding protein Pot1 |Schizosacc... 28 1.7
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 28 1.7
SPAC17G8.10c |dma1||mitotic spindle checkpoint protein Dma1|Schi... 27 2.3
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 27 4.0
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 26 5.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 5.2
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 26 6.9
SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulat... 25 9.2
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.2
SPAC25B8.15c |||wybutosine biosynthesis protein Tyw3|Schizosacch... 25 9.2
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 273 bits (669), Expect = 2e-74
Identities = 135/236 (57%), Positives = 181/236 (76%), Gaps = 1/236 (0%)
Frame = -2
Query: 735 PSQXWXIFVDKNGRELXEAYLEHQXVKNPVVTSARLTSMISPGVRPP-KDAGQISGLNVL 559
PSQ + K RE YL + VKN VVT + + + R K AG I+GLNVL
Sbjct: 160 PSQIGGFILSKM-RETASTYLG-KDVKNAVVT---VPAYFNDSQRQATKAAGAIAGLNVL 214
Query: 558 RVINEPTAAALAYGMDKTDDKIIAVYDLGGGTFDISVLEIQKGVFEVKSTNGDTLLGGED 379
RV+NEPTAAALAYG+DK +D I+AV+DLGGGTFDIS+LE+ GVFEV+STNGDT LGGED
Sbjct: 215 RVVNEPTAAALAYGLDKKNDAIVAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGED 274
Query: 378 FDNVIVNFLVDEFKRDQGIDIRKDAMAMQRLKEAAEKAKIELSGSVQTDINLPYLTMDAS 199
FD +V +V+ FK+++G+D+ KD +A+QR++EAAEKAK ELS +TDI+LP++T DA+
Sbjct: 275 FDVALVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKTDISLPFITADAT 334
Query: 198 GPKHMNLKMTRSKLESLVGDLIRRTVAPCQKALQDAEVQRSDIGEVLLVGGMTRMP 31
GPKH+N++++R++ E LV L+RRT+ PC++AL+DA +Q S+I EV+LVGGMTRMP
Sbjct: 335 GPKHINMEISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMP 390
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 191 bits (465), Expect = 1e-49
Identities = 103/225 (45%), Positives = 150/225 (66%), Gaps = 3/225 (1%)
Frame = -2
Query: 696 RELXEAYLEHQXVKNPVVTSARLTSMISPGVRPP-KDAGQISGLNVLRVINEPTAAALAY 520
RE EAYL + V + VVT + + + R KDAG I+GLNVLR+INEPTAAA+AY
Sbjct: 126 RETAEAYLGGK-VTDAVVT---VPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAY 181
Query: 519 GMDKTD--DKIIAVYDLGGGTFDISVLEIQKGVFEVKSTNGDTLLGGEDFDNVIVNFLVD 346
G+D+++ + + ++DLGGGTFD+S+L I++G+FEVK+T GDT LGGEDFD+ +VN +
Sbjct: 182 GLDRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQ 241
Query: 345 EFKRDQGIDIRKDAMAMQRLKEAAEKAKIELSGSVQTDINLPYLTMDASGPKHMNLKMTR 166
EFKR DI +A A++RL+ A E+AK LS S Q I + L +TR
Sbjct: 242 EFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLFEGID----FYTSITR 297
Query: 165 SKLESLVGDLIRRTVAPCQKALQDAEVQRSDIGEVLLVGGMTRMP 31
++ E L DL R+T+ P ++ L+D++V ++ + E++LVGG TR+P
Sbjct: 298 ARFEELCADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIP 342
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 191 bits (465), Expect = 1e-49
Identities = 107/242 (44%), Positives = 152/242 (62%), Gaps = 3/242 (1%)
Frame = -2
Query: 747 KYNFPSQXWXIFVDKNGRELXEAYLEHQXVKNPVVTSARLTSMISPGVRPP-KDAGQISG 571
K F +Q V +E+ EA L ++ V+ V+T + + S R KDAG I+G
Sbjct: 113 KKQFTAQEISAMVLTKMKEISEAKL-NKRVEKAVIT---VPAYFSDSQRAATKDAGAIAG 168
Query: 570 LNVLRVINEPTAAALAYGMDKTDDKI--IAVYDLGGGTFDISVLEIQKGVFEVKSTNGDT 397
LNVLR+INEPTAAA+AYG+D DK + ++DLGGGTFD+S+L+IQ GVFEV +T GDT
Sbjct: 169 LNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDT 228
Query: 396 LLGGEDFDNVIVNFLVDEFKRDQGIDIRKDAMAMQRLKEAAEKAKIELSGSVQTDINLPY 217
LGGEDFDN +V + EFKR Q IDI D A++RL+ A E+AK LS QT + +
Sbjct: 229 HLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVDS 288
Query: 216 LTMDASGPKHMNLKMTRSKLESLVGDLIRRTVAPCQKALQDAEVQRSDIGEVLLVGGMTR 37
L S + +TR++ E + + T+ P K L+D++V ++D+ +++LVGG TR
Sbjct: 289 L----SNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKADVHDIVLVGGSTR 344
Query: 36 MP 31
+P
Sbjct: 345 IP 346
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 190 bits (462), Expect = 3e-49
Identities = 95/191 (49%), Positives = 135/191 (70%), Gaps = 3/191 (1%)
Frame = -2
Query: 594 KDAGQISGLNVLRVINEPTAAALAYGMDKTD-DKIIAVYDLGGGTFDISVLEIQKGVFEV 418
KDAG I+GLNV+R++NEPTAAA+AYG+DKTD +K I VYDLGGGTFD+S+L I GVFEV
Sbjct: 190 KDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDTEKHIVVYDLGGGTFDVSLLSIDNGVFEV 249
Query: 417 KSTNGDTLLGGEDFDNVIVNFLVDEFKRDQGIDIRKDAMAMQRLKEAAEKAKIELSG--S 244
+T+GDT LGGEDFDN ++N+L + R +D+ KD AM +LK EKAK LS S
Sbjct: 250 LATSGDTHLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKS 309
Query: 243 VQTDINLPYLTMDASGPKHMNLKMTRSKLESLVGDLIRRTVAPCQKALQDAEVQRSDIGE 64
V+ +I + D S ++R+K E + DL ++T+ P ++ L+D+ +++S+I +
Sbjct: 310 VRIEIESFFNGQDFSE------TLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEIDD 363
Query: 63 VLLVGGMTRMP 31
++LVGG TR+P
Sbjct: 364 IVLVGGSTRIP 374
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 188 bits (459), Expect = 6e-49
Identities = 93/190 (48%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
Frame = -2
Query: 594 KDAGQISGLNVLRVINEPTAAALAYGMDKTD--DKIIAVYDLGGGTFDISVLEIQKGVFE 421
KDAG I+GLNVLR+INEPTAAA+AYG+D+++ + + ++DLGGGTFD+S+L I++G+FE
Sbjct: 157 KDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFE 216
Query: 420 VKSTNGDTLLGGEDFDNVIVNFLVDEFKRDQGIDIRKDAMAMQRLKEAAEKAKIELSGSV 241
VK+T GDT LGGEDFD+ +VN EFKR DI +A A++RL+ A E+AK LS S
Sbjct: 217 VKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSA 276
Query: 240 QTDINLPYLTMDASGPKHMNLKMTRSKLESLVGDLIRRTVAPCQKALQDAEVQRSDIGEV 61
Q I + L +TR++ E L DL R T+ P +K L+D+++ +S + E+
Sbjct: 277 QASIEIDSLYEGID----FYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVNEI 332
Query: 60 LLVGGMTRMP 31
+LVGG TR+P
Sbjct: 333 VLVGGSTRIP 342
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 118 bits (284), Expect = 9e-28
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 6/193 (3%)
Frame = -2
Query: 591 DAGQISGLNVLRVINEPTAAALAYGMDKTD------DKIIAVYDLGGGTFDISVLEIQKG 430
+A I+GLN LR++N+ AAAL YG+ KTD + +A+ D G + +S++E +G
Sbjct: 162 EAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRG 221
Query: 429 VFEVKSTNGDTLLGGEDFDNVIVNFLVDEFKRDQGIDIRKDAMAMQRLKEAAEKAKIELS 250
F +KST D LG + D ++++ EFK ID+ + A RL A E+ K LS
Sbjct: 222 QFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVLSNPKATFRLATAVERLKKVLS 281
Query: 249 GSVQTDINLPYLTMDASGPKHMNLKMTRSKLESLVGDLIRRTVAPCQKALQDAEVQRSDI 70
+ +N+ + D + RS E L+ L+ R P +KAL+ A +++ D+
Sbjct: 282 ANANAPLNVEMIMNDIDASSFIK----RSDFEELIKPLLERLTPPIEKALELAGIKKEDL 337
Query: 69 GEVLLVGGMTRMP 31
+ +VGG TR+P
Sbjct: 338 YSIEMVGGCTRVP 350
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 85.8 bits (203), Expect = 6e-18
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 2/190 (1%)
Frame = -2
Query: 594 KDAGQISGLNVLRVINEPTAAALA--YGMDKTDDKIIAVYDLGGGTFDISVLEIQKGVFE 421
+ A +GL VL++I++P A LA Y + DK + V + G ++SV+ ++ G+
Sbjct: 183 ESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFGATRSEVSVVSVKGGLMT 242
Query: 420 VKSTNGDTLLGGEDFDNVIVNFLVDEFKRDQGIDIRKDAMAMQRLKEAAEKAKIELSGSV 241
+ ++ D LGGE +V+VNF EF++ GID RK+A ++ +L+ E K LS
Sbjct: 243 ILASVHDENLGGEQLTDVLVNFFAKEFEKKNGIDPRKNARSLAKLRAQCEITKRVLSNGT 302
Query: 240 QTDINLPYLTMDASGPKHMNLKMTRSKLESLVGDLIRRTVAPCQKALQDAEVQRSDIGEV 61
+ L A G + + R + + + R +A++ A ++ DI EV
Sbjct: 303 TASAAVDSL---ADG-IDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFDISEV 358
Query: 60 LLVGGMTRMP 31
+L GG + P
Sbjct: 359 ILAGGASNTP 368
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 77.8 bits (183), Expect = 2e-15
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Frame = -2
Query: 591 DAGQISGLNVLRVINEPTAAALAYGMDK---TDDKIIAVYDLGGGTFDISVLEI------ 439
+A +I +VL +I++ A A+ Y + + TD +YD G G+ +V+
Sbjct: 181 EAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNIIYDSGSGSTSATVISFDTVEGS 240
Query: 438 ----QKGVFEVKS-TNGDTL-LGGEDFDNVIVNFLVDEFKRDQGIDIRKDAMAMQRLKEA 277
++ + +++ +G TL L G + + ++ F+ + F + GID+ + A+ RL++
Sbjct: 241 SLGKKQNITRIRALASGFTLKLSGNEINRKLIGFMKNSFYQKHGIDLSHNHRALARLEKE 300
Query: 276 AEKAKIELSGSVQTDINLPYLTMDASGPKHMNLKMTRSKLESLVGDLIRRTVAPCQKALQ 97
A + K LS + + ++ L A G LK+TRS LESL D+ V P KAL+
Sbjct: 301 ALRVKHILSANSEAIASIEEL---ADGID-FRLKITRSVLESLCKDMEDAAVEPINKALK 356
Query: 96 DAEVQRSDIGEVLLVGGMTRMP 31
A + S+I ++L GG +R+P
Sbjct: 357 KANLTFSEINSIILFGGASRIP 378
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 34.3 bits (75), Expect = 0.020
Identities = 28/83 (33%), Positives = 39/83 (46%)
Frame = +2
Query: 320 SMP*SRLNSSTRKFTITLSKSSPPSRVSPLVDFTSNTPFWISSTEISKVPPPRSYTAIIL 499
S P S + SS ++ S S P S S DF+S+ S S +P S + IL
Sbjct: 524 STPSSSIISSPMTSVLSSSSSIPTSSSS---DFSSSITTISSGISSSSIPSTFSSVSSIL 580
Query: 500 SSVLSIP*ARAAAVGSLITRSTF 568
SS S P + + ++ S T STF
Sbjct: 581 SSSTSSPSSTSLSISSSSTSSTF 603
>SPAC26H5.06 |pot1||telomere end-binding protein Pot1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 555
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 625 SKPGTGYXWIFHXLVFQVCFXKFPXIFINKNAPXL 729
S+P + Y W+F LV V P IF + +A L
Sbjct: 428 SQPPSSYVWMFALLVRDVSNVTLPVIFFDSDAAEL 462
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 480 DLGGGTFDISVLEIQKGVFEVKSTNGDTLLG-GEDFDNVIVNFLVDEFKR 334
D GG I V E +KGV + NGD G D+ + +N D R
Sbjct: 74 DKCGGYNAIQVSEYEKGVLAILQLNGDPCYAYGTDYPFLALNVSFDSIDR 123
>SPAC17G8.10c |dma1||mitotic spindle checkpoint protein
Dma1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 27.5 bits (58), Expect = 2.3
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 529 PRLRYGQDRRQNNSGV*PRRWNLRYLGAGDPERSV-RSEVHQRRHS 395
P +RY +R+QNN + R+ RY G GD V RS+V RRH+
Sbjct: 46 PLVRYW-NRKQNNLPIYIGRYTERYNG-GDVSAIVFRSKVVSRRHA 89
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.6 bits (56), Expect = 4.0
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 356 KFTITLSKSSPP--SRVSPLVDFTSNTPFWISSTEISKVPPPRSYTAIILSSVLSIP 520
K +T + PP S +P +NTP I++T I VP A LSIP
Sbjct: 201 KVAVTPQSTLPPGFSPATPAPTSAANTPATIAATSIPPVPNVPLVGATTAVPPLSIP 257
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 26.2 bits (55), Expect = 5.2
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 356 KFTITLSKSSPPSRVSPLVDFTSNTPFWISSTEISKVPPPRSYTAIILSSVLSIP 520
+F+ T S + PS SPL NT +S PP S + +SV S+P
Sbjct: 99 RFSSTHSLTRQPSPRSPLTPLKGNTRASPEIRYVSDFTPPSSPFEDMQASVHSLP 153
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 5.2
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Frame = +2
Query: 368 TLSKSSP----PSRVSPLVDFTSNTPFWISSTEISKVPPPRSYTAIILSSVLSIP*ARAA 535
T+S SP PS L +S P +S+T PP TA+ SS +S P +
Sbjct: 1037 TVSVPSPSALSPSVTPQLPPVSSRLPP-VSATRPQIPQPPPVSTALPSSSAVSRPPIATS 1095
Query: 536 AVGSLITRSTFKPEI*PASFGGLTPGEIXEV 628
A S ST P PA PG + +
Sbjct: 1096 AGRSSTAASTSAPLTYPAGDRSHIPGNLRPI 1126
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 75 PIAALRHPEGPSGTAPPSA 131
P A H E PSG+ PPSA
Sbjct: 130 PNPAAHHAELPSGSVPPSA 148
>SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulatory
subunit Rpn11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -1
Query: 508 DRRQNNSGV*PRRWNLRYLGAGDPERSVRSEVHQ 407
+R QN + P + ++Y+G DP++ + +EV +
Sbjct: 256 ERVQNEVTLSPEQLRIQYVGKQDPKKHLDAEVQK 289
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 383 SPPSRVSPLVDFTSNTPFWISSTEISKVPPPR 478
S R+ PLVD + F ++ + PPPR
Sbjct: 98 SDEDRIKPLVDLNQDHSFDMAYLTPASAPPPR 129
>SPAC25B8.15c |||wybutosine biosynthesis protein
Tyw3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 237
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 377 KSSPPSRVSPLVDFTSNTPFWISSTEIS 460
K P S + PL+D ++ P W++++ S
Sbjct: 31 KGHPDSPIFPLLDVINSHPDWVTTSSCS 58
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,160,538
Number of Sequences: 5004
Number of extensions: 64181
Number of successful extensions: 209
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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