Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_A07
(764 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 43 4e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.011
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.015
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.059
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.31
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.55
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 29 0.96
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.96
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 1.7
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.8
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 6.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 43.2 bits (97), Expect = 4e-05
Identities = 20/56 (35%), Positives = 21/56 (37%)
Frame = -2
Query: 535 PXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXP 368
P P P P PPP GP P P G P P PPP + R P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 34.7 bits (76), Expect = 0.015
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = -2
Query: 517 PXPXPPPXXXP---PGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXP 368
P P PP P P P P P PP P PPP A P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP--PPPPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -2
Query: 439 PPXXPXXPPPXKAPXNPRXPTPXPXXGGXXKPGKP 335
PP P P AP P P P GG P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = -2
Query: 478 PXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXPXXGGXXKPGKP 335
P P P P PPP P P P P G P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.011
Identities = 21/61 (34%), Positives = 21/61 (34%)
Frame = -2
Query: 517 PXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXPXXGGXXKPGK 338
P P PPP G P P G PP PPP AP R P P P
Sbjct: 337 PPPPPPPRSNAAGSIPL-PPQGRSAPPP-----PPPRSAPSTGRQPPPLSSSRAVSNPPA 390
Query: 337 P 335
P
Sbjct: 391 P 391
Score = 32.7 bits (71), Expect = 0.059
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = -2
Query: 511 PXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPP-PXKAPXNPRXPTPXP 368
P P P PP P P P P PP P AP P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = -2
Query: 505 PPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXPXXGGXXKPGKP 335
PPP P P G + P PPP ++ N P P G P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRS--NAAGSIPLPPQGRSAPPPPP 365
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Frame = -1
Query: 536 PXPPXXXX-PXPPPXXXPPRTXXXKPP---XRXXKNPPPKXXXXP 414
P PP P PPP P T PP R NPP P
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.015
Identities = 21/62 (33%), Positives = 22/62 (35%)
Frame = -2
Query: 559 PXGXRXXXPXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXP 380
P + P P P PPP PP P G PP P PPP A P P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAG----PPSAP--PPPLPASSAPSVP 1744
Query: 379 TP 374
P
Sbjct: 1745 NP 1746
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = -2
Query: 511 PXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXPXXGGXXKPG 341
P P PP P PP P P P P P P PG
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/52 (26%), Positives = 15/52 (28%)
Frame = -2
Query: 529 PXXXPXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTP 374
P P PP P P P + P P PP P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.059
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = -2
Query: 535 PXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXP 368
P P P P PP P P + + P PPP +AP P+ P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Score = 32.3 bits (70), Expect = 0.078
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = -2
Query: 535 PXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXN--PRXPTP 374
P P P P P PP P P + ++ P PPP AP + P P P
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPP-VPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Score = 30.7 bits (66), Expect = 0.24
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 5/64 (7%)
Frame = -2
Query: 535 PXPXXXPXPXPPPXXXPPGPXPX---NPXXGXRRTPPXXPXX--PPPXKAPXNPRXPTPX 371
P P P P P PP P P P PP PP AP + P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 370 PXXG 359
P G
Sbjct: 1184 PAAG 1187
Score = 30.7 bits (66), Expect = 0.24
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 3/75 (4%)
Frame = -2
Query: 559 PXGXRXXXPXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXP-PPXKAP--XNP 389
P P P P PPP PP P P P P P +AP P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Query: 388 RXPTPXPXXGGXXKP 344
R P P P
Sbjct: 1253 RSSVPSPHSNASPSP 1267
Score = 29.9 bits (64), Expect = 0.42
Identities = 18/63 (28%), Positives = 18/63 (28%), Gaps = 4/63 (6%)
Frame = -2
Query: 535 PXPXXXPXPXPPPXXXPPGPXPXN----PXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXP 368
P P P P PP P P P P P PP P P P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 367 XXG 359
G
Sbjct: 1175 SSG 1177
Score = 29.1 bits (62), Expect = 0.73
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 535 PXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXP 368
P P P P P PP P P P P PP P P P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKP-----SVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
Score = 28.7 bits (61), Expect = 0.96
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -2
Query: 535 PXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXPXXG 359
P P P PPP PP P P P PPP AP P P P G
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPS----------VGVPPVPPPSTAP-----PVPTPSAG 1225
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 5/61 (8%)
Frame = -2
Query: 535 PXPXXXPXPXPPPXXXPPGPXPXN-----PXXGXRRTPPXXPXXPPPXKAPXNPRXPTPX 371
P P P P P P PP P P P P P PP P P P
Sbjct: 1077 PAPSGAP-PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPV 1135
Query: 370 P 368
P
Sbjct: 1136 P 1136
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/59 (28%), Positives = 17/59 (28%), Gaps = 3/59 (5%)
Frame = -2
Query: 535 PXPXXXPXPXPP---PXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXP 368
P P P P P PP P P P P PP P P P P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = -2
Query: 529 PXXXPXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXP 368
P P PP P P P P P PP P P P P
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 535 PXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTP 374
P P P P P P P P P G PP P P + P P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIP-PVP-KPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/56 (26%), Positives = 17/56 (30%)
Frame = -2
Query: 535 PXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXP 368
P P P P PP P P + P P KAP P + P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.31
Identities = 17/76 (22%), Positives = 22/76 (28%)
Frame = -2
Query: 559 PXGXRXXXPXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXP 380
P P P PP P P P + + PP PPP + + P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 379 TPXPXXGGXXKPGKPR 332
P P P+
Sbjct: 185 PSAPSLPSAVPPMPPK 200
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.5 bits (63), Expect = 0.55
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +3
Query: 336 GFPGXXXPPXXGXGVGXRGFXGAFXGGGXXGFXGGVLLXPXXGFXGXGPGG 488
GF G G G RG F GG GF GG GF G GG
Sbjct: 142 GFRGGRGGSRGGFGGNSRG---GFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 28.7 bits (61), Expect = 0.96
Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = -2
Query: 517 PXPXPPPXXXPPGPXPXNPXXGXRRT--PPXXPXXPPPXKAPXNPRXP 380
P P PP PP P ++T PP PP P P+ P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAPQQP 253
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 0.96
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 529 PXXXPXPXPPPXXXPPGPXPXNPXXG 452
P P P PPP PP P P G
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 439 PPXXPXXPPPXKAPXNPRXPTPXPXXG 359
PP P PPP P P P P G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.9 bits (59), Expect = 1.7
Identities = 22/95 (23%), Positives = 23/95 (24%)
Frame = -2
Query: 619 PPPRXXXXGXXXKXXXLXXEPXGXRXXXPXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRT 440
PPP G + EP G P P PP P P
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEP-GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 439 PPXXPXXPPPXKAPXNPRXPTPXPXXGGXXKPGKP 335
P PP P P P G P P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 27.9 bits (59), Expect = 1.7
Identities = 22/95 (23%), Positives = 23/95 (24%)
Frame = -2
Query: 619 PPPRXXXXGXXXKXXXLXXEPXGXRXXXPXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRT 440
PPP G + EP G P P PP P P
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEP-GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 280
Query: 439 PPXXPXXPPPXKAPXNPRXPTPXPXXGGXXKPGKP 335
P PP P P P G P P
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 27.9 bits (59), Expect = 1.7
Identities = 22/95 (23%), Positives = 23/95 (24%)
Frame = -2
Query: 619 PPPRXXXXGXXXKXXXLXXEPXGXRXXXPXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRT 440
PPP G + EP G P P PP P P
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEP-GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 293
Query: 439 PPXXPXXPPPXKAPXNPRXPTPXPXXGGXXKPGKP 335
P PP P P P G P P
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 27.9 bits (59), Expect = 1.7
Identities = 22/95 (23%), Positives = 23/95 (24%)
Frame = -2
Query: 619 PPPRXXXXGXXXKXXXLXXEPXGXRXXXPXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRT 440
PPP G + EP G P P PP P P
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEP-GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 306
Query: 439 PPXXPXXPPPXKAPXNPRXPTPXPXXGGXXKPGKP 335
P PP P P P G P P
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = -2
Query: 517 PXPXPPPXXXPPGPXPXNPXXGXRRTP-PXXPXXPPPXKAPXNPRXPTP 374
P P PP P P P P G P P P P + P P P P
Sbjct: 102 PLPREPPL--PNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPL-PNEPVP 147
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/67 (23%), Positives = 16/67 (23%)
Frame = -2
Query: 535 PXPXXXPXPXPPPXXXPPGPXPXNPXXGXRRTPPXXPXXPPPXKAPXNPRXPTPXPXXGG 356
P P P P P P P PP P P P P P
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSV 634
Query: 355 XXKPGKP 335
P P
Sbjct: 635 PQPPAAP 641
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,624,632
Number of Sequences: 5004
Number of extensions: 24098
Number of successful extensions: 157
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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