BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_A05
(772 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 28 0.11
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 25 1.0
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 25 1.0
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 25 1.0
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 25 1.0
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 25 1.0
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 25 1.0
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 25 1.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 1.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 1.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 1.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 25 1.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 25 1.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 1.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 1.0
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 2.4
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 3.1
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 4.2
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 5.5
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 7.3
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 7.3
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 7.3
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 9.6
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 9.6
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 9.6
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 27.9 bits (59), Expect = 0.11
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RRG HR PSH E+IP
Sbjct: 308 RETSRERSRDRRGRGRSREHRIIPSHYIEQIP 339
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.4 bits (48), Expect = 2.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 637 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 542
RET + RR HR PSH E+IP
Sbjct: 293 RETSKERSRDRRERGRSREHRIIPSHYIEQIP 324
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 136 LVVLGSDLQQPFRLDISDSPNVVLG 210
LV LG L P R+DI N +LG
Sbjct: 270 LVGLGFSLNGPDRIDILSQINGILG 294
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 22.6 bits (46), Expect = 4.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2
Query: 291 NQVVQLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWL 163
N+V+ +HP + K DW I + +L T+ I+ + P L
Sbjct: 237 NKVI-IHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACL 278
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 3/19 (15%)
Frame = +1
Query: 388 FACEFCACSFQIK---SVH 435
+ CE+C+ SF +K SVH
Sbjct: 120 YQCEYCSKSFSVKENLSVH 138
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -1
Query: 763 GALMAEFPLDPQXAQMLIASCNHN 692
G + +FP D Q ++ S HN
Sbjct: 143 GLRLEKFPFDVQECPLIFESWTHN 166
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -2
Query: 465 DNVRQQLSRIMDRFNLK 415
+NV Q +SRI+D ++++
Sbjct: 35 ENVTQTISRILDGYDIR 51
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 724 PXVGQGGTPPSKHPGQ 771
P G G PPS++P Q
Sbjct: 47 PPGGPPGAPPSQNPSQ 62
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 9.6
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -2
Query: 561 TLLNVYHAFKQNM 523
T+L+ YH +K+N+
Sbjct: 423 TILDYYHKYKENL 435
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -2
Query: 315 GSYLTVKDNQVVQLHPSTCLDHKPDWVIYN 226
GS + + N P CL + D++IY+
Sbjct: 318 GSPIVLGLNNTPDRTPDQCLFYNTDFIIYS 347
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 9.6
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -2
Query: 561 TLLNVYHAFKQNM 523
T+L+ YH +K+N+
Sbjct: 423 TILDYYHKYKENL 435
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.4 bits (43), Expect = 9.6
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -2
Query: 561 TLLNVYHAFKQNM 523
T+L+ YH +K+N+
Sbjct: 49 TILDYYHKYKENL 61
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,663
Number of Sequences: 438
Number of extensions: 4108
Number of successful extensions: 28
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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