BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_A02
(771 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein. 34 0.49
X72990-1|CAA51489.1| 656|Homo sapiens EWS protein. 34 0.49
X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein. 34 0.49
CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein. 34 0.49
BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein. 34 0.49
BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoin... 34 0.49
BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoin... 34 0.49
BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoin... 34 0.49
AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoin... 34 0.49
AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens ... 34 0.49
AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens ... 34 0.49
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 33 0.86
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 31 4.6
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 31 4.6
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 31 4.6
X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein. 31 6.0
K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary ... 31 6.0
S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein. 30 8.0
K03207-1|AAA60188.1| 247|Homo sapiens salivary proline-rich pro... 30 8.0
BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein. 30 8.0
>Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein.
Length = 656
Score = 34.3 bits (75), Expect = 0.49
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 641 GGXXXXXXXGXPPXXRXXXGXDYXGGGPXXXXGXRGGXXGGRXXSGGXXXXSXXPGGPSV 462
GG G PP R G GGP G RGG GG G GG +V
Sbjct: 456 GGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNV 515
>X72990-1|CAA51489.1| 656|Homo sapiens EWS protein.
Length = 656
Score = 34.3 bits (75), Expect = 0.49
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 641 GGXXXXXXXGXPPXXRXXXGXDYXGGGPXXXXGXRGGXXGGRXXSGGXXXXSXXPGGPSV 462
GG G PP R G GGP G RGG GG G GG +V
Sbjct: 456 GGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNV 515
>X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein.
Length = 656
Score = 34.3 bits (75), Expect = 0.49
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 641 GGXXXXXXXGXPPXXRXXXGXDYXGGGPXXXXGXRGGXXGGRXXSGGXXXXSXXPGGPSV 462
GG G PP R G GGP G RGG GG G GG +V
Sbjct: 456 GGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNV 515
>CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.49
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 641 GGXXXXXXXGXPPXXRXXXGXDYXGGGPXXXXGXRGGXXGGRXXSGGXXXXSXXPGGPSV 462
GG G PP R G GGP G RGG GG G GG +V
Sbjct: 455 GGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNV 514
>BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein.
Length = 183
Score = 34.3 bits (75), Expect = 0.49
Identities = 26/109 (23%), Positives = 31/109 (28%), Gaps = 4/109 (3%)
Frame = +1
Query: 454 PXXTXGPP--GXXDXXXXPPLLXRPPXXPPRXPSXXXGPPPX*SXPXLXRXXGGXPXXXX 627
P GPP G PP +P PP+ + GPPP P GG
Sbjct: 54 PGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGK 113
Query: 628 XXSPP--XAXXPSTXXXXXFPRGAAXXXAYXRXAXXRSVXSXPXPSPPP 768
PP P P+G + P PPP
Sbjct: 114 PQGPPQQEGNKPQGPPPPGKPQGPPPPGGNPQQPQAPPAGKPQGPPPPP 162
>BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.49
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 641 GGXXXXXXXGXPPXXRXXXGXDYXGGGPXXXXGXRGGXXGGRXXSGGXXXXSXXPGGPSV 462
GG G PP R G GGP G RGG GG G GG +V
Sbjct: 455 GGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNV 514
>BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.49
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 641 GGXXXXXXXGXPPXXRXXXGXDYXGGGPXXXXGXRGGXXGGRXXSGGXXXXSXXPGGPSV 462
GG G PP R G GGP G RGG GG G GG +V
Sbjct: 455 GGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNV 514
>BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 656
Score = 34.3 bits (75), Expect = 0.49
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 641 GGXXXXXXXGXPPXXRXXXGXDYXGGGPXXXXGXRGGXXGGRXXSGGXXXXSXXPGGPSV 462
GG G PP R G GGP G RGG GG G GG +V
Sbjct: 456 GGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNV 515
>AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 656
Score = 34.3 bits (75), Expect = 0.49
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 641 GGXXXXXXXGXPPXXRXXXGXDYXGGGPXXXXGXRGGXXGGRXXSGGXXXXSXXPGGPSV 462
GG G PP R G GGP G RGG GG G GG +V
Sbjct: 456 GGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNV 515
>AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens
cDNA FLJ32119 fis, clone PEBLM1000034, highly similar to
RNA-BINDING PROTEIN EWS. ).
Length = 600
Score = 34.3 bits (75), Expect = 0.49
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 641 GGXXXXXXXGXPPXXRXXXGXDYXGGGPXXXXGXRGGXXGGRXXSGGXXXXSXXPGGPSV 462
GG G PP R G GGP G RGG GG G GG +V
Sbjct: 400 GGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNV 459
>AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens
cDNA FLJ31747 fis, clone NT2RI2007377, highly similar to
RNA-BINDING PROTEIN EWS. ).
Length = 661
Score = 34.3 bits (75), Expect = 0.49
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 641 GGXXXXXXXGXPPXXRXXXGXDYXGGGPXXXXGXRGGXXGGRXXSGGXXXXSXXPGGPSV 462
GG G PP R G GGP G RGG GG G GG +V
Sbjct: 461 GGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNV 520
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 33.5 bits (73), Expect = 0.86
Identities = 23/84 (27%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Frame = +1
Query: 502 PPLLXRPPXXPPRXPSXXXGPPPX*SXPXLXRXXG-GXPXXXXXXSPPXAXXPSTXXXXX 678
PPL PP PP P GPPP P L P PP P
Sbjct: 326 PPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPPGLF 385
Query: 679 FPRGAAXXXAYXRXAXXRSVXSXP 750
F G++ + A S P
Sbjct: 386 FGLGSSSSQCPRKPAIEPSCPMKP 409
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 472 PPGXXDXXXXPPLLXRPPXXPPRXPSXXXGPPP 570
PPG PP L RPP PP P PPP
Sbjct: 81 PPGGIPPPMGPPHLQRPPFMPP--PMSSMPPPP 111
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 472 PPGXXDXXXXPPLLXRPPXXPPRXPSXXXGPPP 570
PPG PP L RPP PP P PPP
Sbjct: 81 PPGGIPPPMGPPHLQRPPFMPP--PMSSMPPPP 111
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 472 PPGXXDXXXXPPLLXRPPXXPPRXPSXXXGPPP 570
PPG PP L RPP PP P PPP
Sbjct: 85 PPGGIPPPMGPPHLQRPPFMPP--PMSSMPPPP 115
>X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein.
Length = 234
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +1
Query: 454 PXXTXGPP--GXXDXXXXPPLLXRPPXXPPRXPSXXXGPPPX*SXPXLXRXXGGXPXXXX 627
P GPP G PP +P PP+ + GPPP P GG
Sbjct: 20 PGKPQGPPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGP 79
Query: 628 XXSPPXAXXP 657
+P P
Sbjct: 80 PPTPGKPEGP 89
>K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary
proline-rich protein 1 gene, segment 1. ).
Length = 173
Score = 30.7 bits (66), Expect = 6.0
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXRPPXXPPRXPSXXXGPPPX*SXPXLXRXXGG 609
P GPP D P +P PP+ + GPPP P GG
Sbjct: 119 PGKPQGPPPQGDKSQSPRSPRKPQGPPPQGGNQPQGPPPPPGKPQGPPQQGG 170
>S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein.
Length = 238
Score = 30.3 bits (65), Expect = 8.0
Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +1
Query: 454 PXXTXGPP--GXXDXXXXPPLLXRPPXXPPRXPSXXXGPPPX*SXPXLXRXXGG 609
P GPP G PP +P PP+ + GPPP P GG
Sbjct: 24 PGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGG 77
>K03207-1|AAA60188.1| 247|Homo sapiens salivary proline-rich
protein precursor protein.
Length = 247
Score = 30.3 bits (65), Expect = 8.0
Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +1
Query: 454 PXXTXGPP--GXXDXXXXPPLLXRPPXXPPRXPSXXXGPPPX*SXPXLXRXXGG 609
P GPP G PP +P PP+ + GPPP P GG
Sbjct: 54 PGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGG 107
>BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein.
Length = 268
Score = 30.3 bits (65), Expect = 8.0
Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +1
Query: 454 PXXTXGPP--GXXDXXXXPPLLXRPPXXPPRXPSXXXGPPPX*SXPXLXRXXGG 609
P GPP G PP +P PP+ + GPPP P GG
Sbjct: 54 PGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGG 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,737,400
Number of Sequences: 237096
Number of extensions: 1059833
Number of successful extensions: 5269
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4703
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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