Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_A02
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.23
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.23
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.23
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.30
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.30
Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 2.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 2.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 2.8
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 4.8
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 28 6.4
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 28 6.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXRPPXXPP--RXPSXXXGPPP 570
P T GPP PP+ PP PP P GPPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 31.5 bits (68), Expect = 0.69
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXRPPXXPPRXPSXXXGPPP 570
P T GPP PP+ PP PP P PPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPP-PPGGCPPPPP 773
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/89 (26%), Positives = 26/89 (29%)
Frame = +1
Query: 502 PPLLXRPPXXPPRXPSXXXGPPPX*SXPXLXRXXGGXPXXXXXXSPPXAXXPSTXXXXXF 681
PP+ PP PP P GPPP L GG P PP P +
Sbjct: 707 PPITGGPPP-PPGLPPITGGPPPPPPPGGLPPITGGPP----PPPPPGGLPPISGGPPPP 761
Query: 682 PRGAAXXXAYXRXAXXRSVXSXPXPSPPP 768
P P P PPP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 472 PPGXXDXXXXPPLLXRPPXXPPRXPSXXXGPPPX*SXPXLXRXXGGXP 615
PPG PP PP P P GPPP L GG P
Sbjct: 716 PPGLPPITGGPP----PPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXRPPXXPP--RXPSXXXGPPP 570
P T GPP PP+ PP PP P GPPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 31.5 bits (68), Expect = 0.69
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXRPPXXPPRXPSXXXGPPP 570
P T GPP PP+ PP PP P PPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPP-PPGGCPPPPP 773
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/89 (26%), Positives = 26/89 (29%)
Frame = +1
Query: 502 PPLLXRPPXXPPRXPSXXXGPPPX*SXPXLXRXXGGXPXXXXXXSPPXAXXPSTXXXXXF 681
PP+ PP PP P GPPP L GG P PP P +
Sbjct: 707 PPITGGPPP-PPGLPPITGGPPPPPPPGGLPPITGGPP----PPPPPGGLPPISGGPPPP 761
Query: 682 PRGAAXXXAYXRXAXXRSVXSXPXPSPPP 768
P P P PPP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 472 PPGXXDXXXXPPLLXRPPXXPPRXPSXXXGPPPX*SXPXLXRXXGGXP 615
PPG PP PP P P GPPP L GG P
Sbjct: 716 PPGLPPITGGPP----PPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXRPPXXPP--RXPSXXXGPPP 570
P T GPP PP+ PP PP P GPPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Score = 31.5 bits (68), Expect = 0.69
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXRPPXXPPRXPSXXXGPPP 570
P T GPP PP+ PP PP P PPP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPP-PPGGCPPPPP 356
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/89 (26%), Positives = 26/89 (29%)
Frame = +1
Query: 502 PPLLXRPPXXPPRXPSXXXGPPPX*SXPXLXRXXGGXPXXXXXXSPPXAXXPSTXXXXXF 681
PP+ PP PP P GPPP L GG P PP P +
Sbjct: 290 PPITGGPPP-PPGLPPITGGPPPPPPPGGLPPITGGPP----PPPPPGGLPPISGGPPPP 344
Query: 682 PRGAAXXXAYXRXAXXRSVXSXPXPSPPP 768
P P P PPP
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 472 PPGXXDXXXXPPLLXRPPXXPPRXPSXXXGPPPX*SXPXLXRXXGGXP 615
PPG PP PP P P GPPP L GG P
Sbjct: 299 PPGLPPITGGPP----PPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 342
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.30
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 7/51 (13%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXR-----PPXXPPRXPSXXXG--PPPX*SXP 585
P GPPG PP R PP PPR PS G PPP S P
Sbjct: 321 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 371
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.30
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 7/51 (13%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXR-----PPXXPPRXPSXXXG--PPPX*SXP 585
P GPPG PP R PP PPR PS G PPP S P
Sbjct: 331 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 381
>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 566 GGPXXXXGXRGGXXGGRXXSGGXXXXSXXPG 474
GGP G RGG GGR S G PG
Sbjct: 332 GGPGGPGGYRGGRGGGRGGSYGNFGNRGPPG 362
>Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 566 GGPXXXXGXRGGXXGGRXXSGGXXXXSXXPG 474
GGP G RGG GGR S G PG
Sbjct: 335 GGPGGPGGYRGGRGGGRGGSYGNFGNRGPPG 365
>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 566 GGPXXXXGXRGGXXGGRXXSGGXXXXSXXPG 474
GGP G RGG GGR S G PG
Sbjct: 332 GGPGGPGGYRGGRGGGRGGSYGNFGNRGPPG 362
>Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 566 GGPXXXXGXRGGXXGGRXXSGGXXXXSXXPG 474
GGP G RGG GGR S G PG
Sbjct: 335 GGPGGPGGYRGGRGGGRGGSYGNFGNRGPPG 365
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/93 (26%), Positives = 27/93 (29%), Gaps = 5/93 (5%)
Frame = +1
Query: 502 PPLLXRPPXX----PPRXPSXXXGPPPX*SXPXLXRXXGGXPXXXXXXSPP-XAXXPSTX 666
PP PP PP P+ PPP P R P SPP + P
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 317
Query: 667 XXXXFPRGAAXXXAYXRXAXXRSVXSXPXPSPP 765
P G R S P SPP
Sbjct: 318 GGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/67 (28%), Positives = 19/67 (28%), Gaps = 2/67 (2%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXRPPXXPP--RXPSXXXGPPPX*SXPXLXRXXGGXPXXXX 627
P PP PP PP P P G PP P G P
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 317
Query: 628 XXSPPXA 648
SPP A
Sbjct: 318 GGSPPPA 324
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/93 (26%), Positives = 27/93 (29%), Gaps = 5/93 (5%)
Frame = +1
Query: 502 PPLLXRPPXX----PPRXPSXXXGPPPX*SXPXLXRXXGGXPXXXXXXSPP-XAXXPSTX 666
PP PP PP P+ PPP P R P SPP + P
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 338
Query: 667 XXXXFPRGAAXXXAYXRXAXXRSVXSXPXPSPP 765
P G R S P SPP
Sbjct: 339 GGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/67 (28%), Positives = 19/67 (28%), Gaps = 2/67 (2%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXRPPXXPP--RXPSXXXGPPPX*SXPXLXRXXGGXPXXXX 627
P PP PP PP P P G PP P G P
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 338
Query: 628 XXSPPXA 648
SPP A
Sbjct: 339 GGSPPPA 345
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/93 (26%), Positives = 27/93 (29%), Gaps = 5/93 (5%)
Frame = +1
Query: 502 PPLLXRPPXX----PPRXPSXXXGPPPX*SXPXLXRXXGGXPXXXXXXSPP-XAXXPSTX 666
PP PP PP P+ PPP P R P SPP + P
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 323
Query: 667 XXXXFPRGAAXXXAYXRXAXXRSVXSXPXPSPP 765
P G R S P SPP
Sbjct: 324 GGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/67 (28%), Positives = 19/67 (28%), Gaps = 2/67 (2%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXRPPXXPP--RXPSXXXGPPPX*SXPXLXRXXGGXPXXXX 627
P PP PP PP P P G PP P G P
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 323
Query: 628 XXSPPXA 648
SPP A
Sbjct: 324 GGSPPPA 330
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/70 (27%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXRP--PXXPPRXPSXXXGPPPX*SXPXLXRXXGGXPXXXX 627
P G PG P +P P PP+ P PPP P G P
Sbjct: 94 PQGPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPG 153
Query: 628 XXSPPXAXXP 657
PP P
Sbjct: 154 DNGPPGEQGP 163
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = -2
Query: 656 GXXAXGGXXXXXXXGXPPXXRXXXGXDYXG-GGPXXXXGXRGGXXGGRXXSGGXXXXSXX 480
G GG G R G G GG G RGG GGR +GG
Sbjct: 75 GGGRGGGRGGNGGFGDNGGLRGGNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGG 134
Query: 479 PGG 471
GG
Sbjct: 135 RGG 137
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +1
Query: 469 GPPGXXDXXXXPPLLXRP-PXXPPRXPSXXXGPPPX*SXPXLXRXXGGXPXXXXXXSPPX 645
GPPG D PP P P P P G PP P + GG P P
Sbjct: 270 GPPGPFDPSGAPPSGGPPGPFDPSGAP--PSGGPPGPFDPSGAQPSGGPPGPFNPSGAPP 327
Query: 646 AXXP 657
+ P
Sbjct: 328 SGGP 331
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +1
Query: 454 PXXTXGPPGXXDXXXXPPLLXRPPXXPPRXPSXXXGPPP 570
P PP PP + PP PP P PPP
Sbjct: 42 PLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,906,265
Number of Sequences: 27780
Number of extensions: 136212
Number of successful extensions: 914
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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