Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_P11
         (831 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak k...    31   1.3  
U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak k...    31   1.3  
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical...    29   3.1  
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.      29   3.1  
Z66516-1|CAA91358.3|  251|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z68011-1|CAA92012.1|  584|Caenorhabditis elegans Hypothetical pr...    29   5.4  
U23514-11|AAM48531.1|  287|Caenorhabditis elegans Long protein 1...    28   7.1  
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ...    28   7.1  
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr...    28   9.4  

>U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform b protein.
          Length = 422

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQ 294
           G +++ F H  S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329


>U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform a protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQ 294
           G +++ F H  S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423


>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
            K04G2.8b protein.
          Length = 1188

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +1

Query: 226  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 390
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 807  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866

Query: 391  SFRP*PQNTSHS 426
               P P+  SHS
Sbjct: 867  YLEPEPERRSHS 878


>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
            K04G2.8a protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +1

Query: 226  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 390
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 391  SFRP*PQNTSHS 426
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical
           protein Y73F8A.16 protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 358
           F  L F++TG E KS  V + S+    +I  GYR+
Sbjct: 37  FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71


>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +1

Query: 226  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 390
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 391  SFRP*PQNTSHS 426
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>Z66516-1|CAA91358.3|  251|Caenorhabditis elegans Hypothetical
           protein W03C9.1 protein.
          Length = 251

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
 Frame = +2

Query: 344 KGYRDAYLVNLEAVVFPSAPSLKI-PVTVDLCWTTADVTVEGVNVLATPSSSRITI--GG 514
           K  +D Y  + E  +F   PSLKI P T+    ++  + ++   +L   +  R+      
Sbjct: 159 KSPQDYYCTDEEDSLF-DVPSLKIDPATLKSSRSSIPLNIQDSRLLRL-NQDRLAFKKSH 216

Query: 515 LALMHQATLPWRSRLHQTRSSNPRFHTPTT 604
               H A  P  +R+H++ S + R   PTT
Sbjct: 217 TVYPHSAISPHSNRMHRSESRSSRESEPTT 246


>Z68011-1|CAA92012.1|  584|Caenorhabditis elegans Hypothetical
           protein T21B6.1 protein.
          Length = 584

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +1

Query: 538 PPLAISATSNPIIKSPIPY-TNHPRLNIHFHQSPERRTKXSS 660
           PPL +S   NP+ K P P  +N PRL    H S     K  S
Sbjct: 541 PPLKVSQHENPLYKPPPPIASNSPRLG---HASSSSNQKLQS 579


>U23514-11|AAM48531.1|  287|Caenorhabditis elegans Long protein 1,
           isoform c protein.
          Length = 287

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
 Frame = -1

Query: 603 VVGVWNRGFDDRV*CSRDRQGRVA*CIRARPP-----IVMREDEGVASTLTPSTVTSAVV 439
           V GVW RG  +   C  + QG+ + C    P        M ++    +T T ST TS   
Sbjct: 193 VQGVWGRGHRNVFVCHYNPQGKCSNCPANAPACYQGLCYMPKNYEAPTTTTESTTTSTTT 252

Query: 438 QQRST 424
           ++ +T
Sbjct: 253 EEPTT 257


>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
            protein Y108G3AL.7 protein.
          Length = 1192

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 587  FHTPTTPDLTSISINPLNAVLKXVRA 664
            F TP TP L+  +I  L+ VLK +RA
Sbjct: 1017 FFTPDTPRLSPSAIQDLDKVLKKIRA 1042


>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
            C38D4.3 protein.
          Length = 1784

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = +2

Query: 488  SSSRITIGGLALMHQATLPWRSRLHQTRSSNPRFHTPTTPDLTSISI 628
            +S++ T+     + ++ +P RS   +TRS++ R  T   PD TS+++
Sbjct: 1451 ASAQKTVAANKSVLESEIPSRSASRRTRSTSLRNDTVAEPDETSVAM 1497


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,054,152
Number of Sequences: 27780
Number of extensions: 364267
Number of successful extensions: 1121
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)