Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_P10
(825 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.35
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 29 0.61
SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|c... 29 1.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.1
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 3.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 4.3
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 27 4.3
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 5.6
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 5.6
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 26 7.5
SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizos... 26 7.5
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 26 7.5
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 26 7.5
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 26 7.5
SPBC582.10c |||ATP-dependent DNA helicase Rhp16b |Schizosaccharo... 26 7.5
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 25 9.9
SPBC106.03 |||DUF1776 family protein|Schizosaccharomyces pombe|c... 25 9.9
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo... 25 9.9
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.9
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.3 bits (65), Expect = 0.35
Identities = 39/121 (32%), Positives = 49/121 (40%), Gaps = 14/121 (11%)
Frame = +1
Query: 205 SSPMTPPSTTRVGRRRCFIDDFRPRLPPWDS---------GSGSGASTLTPRKAQRCSSK 357
S P PP ++RV + RP PP S G+GS S+L P S+
Sbjct: 288 SKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNA 347
Query: 358 GVALRTPR*ASPSRLGASIPPPPPFAQSRCSTS----PYRGPRR-SNI*ASPSTVG*HSA 522
++ P P G S PPPPP +S ST P R SN A P + SA
Sbjct: 348 AGSIPLP----PQ--GRSAPPPPP-PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSA 400
Query: 523 P 525
P
Sbjct: 401 P 401
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 29.5 bits (63), Expect = 0.61
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 311 PLPEPLSHGGSRGLKSSMKQRLLPTRVVDGGVIGEERQ 198
P P+S G SRG SS++Q++ + ++ G + E Q
Sbjct: 576 PTTRPVSRGLSRGTSSSLQQKVKASTPLNSGALNETVQ 613
>SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 571
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 482 FDLRGPRYGLVEHRDWANGGGGGIDAPSREGD 387
F+L Y L E +W GG G+ AP+ E D
Sbjct: 160 FELDVSNYPLPEGEEWMVGGSFGVMAPNNEED 191
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.1
Identities = 26/82 (31%), Positives = 39/82 (47%)
Frame = +1
Query: 310 GASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSPYRGPRRSNI* 489
G++ P K R S+ G PR A+P SIPPP P S +SP P + +
Sbjct: 939 GSNMRLPTKLTRPSNDGRKASGPRPAAPP----SIPPPLPV--SNILSSPTSEPPKDHPP 992
Query: 490 ASPSTVG*HSAPTSRRYAIVPP 555
++P + ++P + A VPP
Sbjct: 993 SAPLSKPVSTSPAA-PLARVPP 1013
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 530 DVGAECHPTVEGDA*IFDLRGPRYGLVEHRDWANG 426
DV A C +++ +DLR PR+ + DW NG
Sbjct: 336 DVLATC--SIDSSVHCWDLRSPRFPVNSFYDWHNG 368
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 4.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 376 PR*ASPSRLGASIPPPPPFA 435
P+ A+P ++ A PPPPP +
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMS 1713
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 464 RYGLVEHRDWANGGGGGIDAPSREGD 387
+Y L+E +DW GG GI P+ + +
Sbjct: 193 KYPLLEGKDWKIGGSFGIMPPNSDAE 218
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 469 PRRSNI*ASPSTVG*HSAPTSRRYAIVPPSF*DVSTR 579
P SN + ST H P+S+R +++PP+ ++ +R
Sbjct: 314 PSGSNQASLRSTSTIHYTPSSKRISVIPPNTSNIGSR 350
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.2 bits (55), Expect = 5.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 366 PPNTTLSIPLPTRRVNTPAPAVRPITMFDQPIPWAPKVKYLGVT 497
PP + + P PT NTPA T+ IP P V +G T
Sbjct: 211 PPGFSPATPAPTSAANTPA------TIAATSIPPVPNVPLVGAT 248
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 612 NKVTLYKTCIRPVMTYASVVFAHAGRTHLKSFQII 716
N +T+ ++ +RPV TY S +HL ++
Sbjct: 220 NDITIKESDVRPVSTYHSFALTSDNNSHLYGICVV 254
>SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 891
Score = 25.8 bits (54), Expect = 7.5
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Frame = +1
Query: 232 TRVGRRRCFIDDFRPRLPPWDSGSGSGASTLTPR--KAQRCSSKGVALRTPR*ASPSRLG 405
T+ R IDD RL S SG LTP+ S G + RT +P LG
Sbjct: 39 TQTHRDSVKIDDILTRLSISKSESGQATPVLTPQLEGMNDYFSLGPSKRTGGSMTPG-LG 97
Query: 406 ASIPPP------PPFAQSRC-STSPYRGPRRSNI*ASPSTVG*HSAPTSRR 537
A P P P + Q R +TSP R R+++ A+P +G + P R+
Sbjct: 98 AMSPIPGSGRSSPLYTQPRSRATSPSR-VRQADRFAAPG-IGAGALPIRRK 146
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 25.8 bits (54), Expect = 7.5
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 56 TVRSDIESRERVPGPXHVTAGVPQGSALSPXTI*FVYQR--YTPVSGDPSG 202
T+ SD ESR R + G+ G+ + P I YQ P G P G
Sbjct: 399 TILSDPESRRRFDSGVDLEPGMEGGAGMDPFDILRAYQAGGSFPGGGFPGG 449
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.8 bits (54), Expect = 7.5
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 177 PRSPETHLALFADDTAIYYSCRKKALLHRRL---QTAATTMGQWFRKWRIDINPTKSTAV 347
P++ + +LF+D++ + S +L ++ + F++ + ST +
Sbjct: 326 PQTQQNESSLFSDNSMVNSSSNSFSLFPNATLPNPPSSELLTTPFQQIKPPSQVFMSTGL 385
Query: 348 LFKRGRPPNTTLSIPLPTRRVNTPAPAVRP 437
L K+ RP PLP + P+ VRP
Sbjct: 386 LSKQHRPRKNINFTPLPPSTPSKPSTFVRP 415
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 300 FRKWRIDINPTKSTAVLFKRGRPPNTTLSIPL 395
F+ W+ P+ S +L ++G PP + LS L
Sbjct: 260 FQIWKAHNPPSSSKFILEQKGLPPESNLSSEL 291
>SPBC582.10c |||ATP-dependent DNA helicase Rhp16b
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 54 EPFVPISSRGNAFPAPXTSQPE 119
+PF PIS + A+ P T PE
Sbjct: 116 DPFAPISVKSGAWKKPYTKVPE 137
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 25.4 bits (53), Expect = 9.9
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 373 TPR*ASPSRLGASIPPPPPFAQS-RCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYAIV 549
+P SP+ +GA IP P A S + STS SN+ +++ S PT ++
Sbjct: 24 SPDSKSPNSVGA-IPSSSPLASSTKASTSTPFVENCSNLLCDLASIVEDSPPTLTNTSLS 82
Query: 550 PPSF 561
P SF
Sbjct: 83 PHSF 86
>SPBC106.03 |||DUF1776 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 357
Score = 25.4 bits (53), Expect = 9.9
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 305 PEPLSHGGSRGLKSSMKQRLLPTRVVDG 222
P P H G R R LPT V+DG
Sbjct: 311 PSPTRHVGCRTFFMVTVSRFLPTCVIDG 338
>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.4 bits (53), Expect = 9.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 668 YTCIGHDGAYASFVECHLISKGHFTSP 588
Y +G DG Y S EC S+ FT P
Sbjct: 156 YETLGEDGIYTSLDECK--SRAIFTDP 180
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 9.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 372 NTTLSIPLPTRRVNTPAPAVRP 437
N T S PLPT N P P P
Sbjct: 172 NYTASSPLPTASANAPLPVPPP 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,387,071
Number of Sequences: 5004
Number of extensions: 73743
Number of successful extensions: 263
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 404442380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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