Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_P09
(834 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 35 0.062
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 34 0.14
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 31 1.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 1.8
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 30 1.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.3
U23413-1|AAA64290.2| 182|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 5.4
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 5.4
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 5.4
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 9.5
U80841-1|AAB37939.1| 477|Caenorhabditis elegans Hypothetical pr... 28 9.5
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 9.5
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 28 9.5
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 41.5 bits (93), Expect = 7e-04
Identities = 46/198 (23%), Positives = 76/198 (38%), Gaps = 1/198 (0%)
Frame = +1
Query: 10 RSXXSSRGNAFPGPXHVTAGVPQGSAXLPXYYSVCISTIYPGSPE-THLALFADDTAIYY 186
RS G T GVPQG+ P + + ++ I PE FADDT +Y
Sbjct: 57 RSFRVRIGQTLSSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYA 116
Query: 187 SCRKKALLHRRLQTVATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVN 366
S K LQ+ + W + ++ +N +K T+ + + RR++
Sbjct: 117 S-TPKTESENNLQSALDAVVDWTKGSKLTLNQSK--------------TVHVTVGKRRID 161
Query: 367 TPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRR 546
+ PI + LG + ++ F H + + A F L ++
Sbjct: 162 F------KYHLDGYPIERKAITRDLGFLISEKLDFSDHWRKCINLAKFQLANMFNKYSTS 215
Query: 547 SKMSLRNKVTLYKTCIRP 600
+K + + LYKT IRP
Sbjct: 216 NKKLM---ILLYKTFIRP 230
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 35.1 bits (77), Expect = 0.062
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 1/203 (0%)
Frame = +1
Query: 58 VTAGVPQGSAXLPXYYSVCISTIYPG-SPETHLALFADDTAIYYSCRKKALLHRRLQTVA 234
+++GVPQGS P + + I+ + +P +++ FADD I+++ ++ + +
Sbjct: 877 ISSGVPQGSVSGPLLFILFINNLLIDLAPTINISCFADDVKIFHT--DPTIIQNSIDIIV 934
Query: 235 TTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPI 414
+ W + + + PTKS + L TR N + ++ PI
Sbjct: 935 S----WSKLNELPLAPTKSAL--------------LALGTRNKN------QSYSVDGVPI 970
Query: 415 PWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCI 594
+ V+ LG+ D ++ F HI V + + R ++ S S + LYKT +
Sbjct: 971 TPSSTVRDLGLITDCKLKFEHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKTYV 1027
Query: 595 RPGHXLCKCSVRSRGPHTLKILS 663
P C PH+ +LS
Sbjct: 1028 APIMNYCS---EVYAPHSNSVLS 1047
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 33.9 bits (74), Expect = 0.14
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 25/175 (14%)
Frame = +1
Query: 43 PGPXHVTAGVPQGSAXLPXYYSVCISTIYPGSPET-HLALFADDTAIYYSCRKKALLHRR 219
P +++GVP+GS P + + I+++ P + + FADD +Y L+
Sbjct: 48 PNIHPISSGVPKGSVSGPFLFLIFINSLLLSVPPSISCSAFADDLKVY--SHSPPLIQTT 105
Query: 220 LQTVATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSI-PLPTRRVNTPAPAVR--- 387
+ + T W ++ + K+ A+L K G N L + PL V A R
Sbjct: 106 IDLITT----WSENNKLPLAVHKA-ALLNKLGFSSNCVLLLAPLINSLVCRLLAASRTGV 160
Query: 388 -----------------PITMYD-QPIPWAPK--VKYLGVTLDSRMTFRPHIKTV 492
P T+Y +P +P + LG+ DS++TF+PHIK +
Sbjct: 161 STVAHSKTCLLHLGKKNPKTVYKINNLPISPSNIARDLGILTDSKLTFKPHIKKI 215
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 289 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 426
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 307 KRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 426
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 248 SGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFAQSRCTTSPYRGPR 427
+GS G+ST A SS T + + S G+STP P P + S G
Sbjct: 1235 TGSTEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGSSTPTPNPSQSTSPVVSTTTGEM 1294
Query: 428 RSN-I*ASPSTVG 463
S+ +PST+G
Sbjct: 1295 TSHGSTQTPSTIG 1307
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 334 LSIPLPTRRVNTPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 504
++ PLP+ P+ VRP T +D IP+ ++G + T + R RA
Sbjct: 890 MATPLPSFNGRPPS-VVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 289 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 426
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>U23413-1|AAA64290.2| 182|Caenorhabditis elegans Hypothetical
protein B0353.1 protein.
Length = 182
Score = 29.1 bits (62), Expect = 4.1
Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 6/139 (4%)
Frame = +2
Query: 35 TRSXAPXTSQPESRKAPPXSPXTIQFVYQ---RYTPXLRRPIWRSSPMTPPSTTRVGRR- 202
+RS P S P ++P + I+ + R +P L S P+ T
Sbjct: 11 SRSFLPQDSGPMLHRSPSGAKRKIRQKREEASRPSPFLSPSSSSSQTSISPTPTETSSNY 70
Query: 203 RCFID--DFRP*LPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPP 376
R +D D++ LP +D S TPR + S+ L S + A PPP
Sbjct: 71 RSLVDSGDYQSILPDFDP---SFVPVPTPRLSVPFSASMSTLELSSSTLSSPVTAPAPPP 127
Query: 377 PPFAQSRCTTSPYRGPRRS 433
PP ++ P RS
Sbjct: 128 PPTSKPTVEVHPMPTDERS 146
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 349 PTRRVNTPAPAVRPITMYDQPIPW 420
P R V++P +PIT++DQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 709 PRGSDGYPAKTGLNNLKG 656
PRG DG+P + GL+ L G
Sbjct: 1153 PRGDDGFPGRDGLDGLPG 1170
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 709 PRGSDGYPAKTGLNNLKG 656
PRG DG+P + GL+ L G
Sbjct: 1410 PRGDDGFPGRDGLDGLPG 1427
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 709 PRGSDGYPAKTGLNNLKG 656
PRG DG+P + GL+ L G
Sbjct: 1409 PRGDDGFPGRDGLDGLPG 1426
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +3
Query: 237 HHGTVVPEVAHRH*P-HEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPRRSPNHDVRPAH 413
HHG H H P H H G + G+ HH H SP H +P H H
Sbjct: 525 HHGH---HGEHHHAPAHHGHHG--EHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGH 579
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +3
Query: 237 HHGTVVPEVAHRH*P-HEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPRRSPNH 395
HHG H H P H H G + G+ HH H SP H +P H
Sbjct: 467 HHGH---HGEHHHAPAHHGHHG--EHGTHHGHHGSHHSPAHHGHHGEHHHAPAH 515
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 365 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 240
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 9.5
Identities = 26/82 (31%), Positives = 34/82 (41%)
Frame = +2
Query: 269 STLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFAQSRCTTSPYRGPRRSNI*AS 448
ST T +S V P +L+ AST P + S TTSP P S + +S
Sbjct: 408 STSTTTTEVTSTSSTVTTTEPT-TTLTTSTASTSTTEP-STSTVTTSPSTSPVTSTVTSS 465
Query: 449 PSTVG*HSAPTSRRYAIVPPSS 514
S+ + PTS PSS
Sbjct: 466 SSSSTTVTTPTSTESTSTSPSS 487
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 9.5
Identities = 26/82 (31%), Positives = 34/82 (41%)
Frame = +2
Query: 269 STLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFAQSRCTTSPYRGPRRSNI*AS 448
ST T +S V P +L+ AST P + S TTSP P S + +S
Sbjct: 408 STSTTTTEVTSTSSTVTTTEPT-TTLTTSTASTSTTEP-STSTVTTSPSTSPVTSTVTSS 465
Query: 449 PSTVG*HSAPTSRRYAIVPPSS 514
S+ + PTS PSS
Sbjct: 466 SSSSTTVTTPTSTESTSTSPSS 487
>U80841-1|AAB37939.1| 477|Caenorhabditis elegans Hypothetical
protein C13A10.1 protein.
Length = 477
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 780 MTPTEKLTDDFKSRXSWR-STFLTXHG 703
MT +E LT+D+ S SWR T ++ HG
Sbjct: 329 MTSSEFLTEDYGSGPSWRLDTVVSTHG 355
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 27.9 bits (59), Expect = 9.5
Identities = 34/130 (26%), Positives = 47/130 (36%), Gaps = 9/130 (6%)
Frame = +2
Query: 50 PXTSQPESRKAPPXSPXTIQ---FVYQRYTPXLRRPIWRSSPMTPPSTTRVGRRRCFIDD 220
P S P S+ PP P Q F R RP+ ++ + P R G
Sbjct: 162 PPVSVPSSKPTPPPPPPAQQKPSFQSDREQFRTMRPLRPANDVKPTMYRRSGSSEDIPQA 221
Query: 221 F------RP*LPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPP 382
RP PP + TP AQ S ++P ++SR PPPPP
Sbjct: 222 TSATRLARPLAPPPARPAAPPPPVPTPSIAQMSSR----FQSP---AISRTLDDAPPPPP 274
Query: 383 FAQSRCTTSP 412
S+ + +P
Sbjct: 275 RIASKTSVAP 284
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +1
Query: 325 NTTLSIPLPTRRVNTPAPAVRPITMYDQP----IPWAPK 429
+ TL+ PLP R PA +RP M P +P+ PK
Sbjct: 369 SNTLTAPLPRRYQGPPAQVLRPPQMGPPPGINQVPYQPK 407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,481,995
Number of Sequences: 27780
Number of extensions: 450901
Number of successful extensions: 1994
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1979
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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