Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_P06
(889 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012176-1|AAH12176.1| 311|Homo sapiens NKD2 protein protein. 33 1.4
AF358137-1|AAK57486.1| 451|Homo sapiens naked cuticle-2 protein. 33 1.4
AB062887-1|BAB70501.1| 451|Homo sapiens Dvl-binding protein NKD... 33 1.4
BC021908-1|AAH21908.1| 485|Homo sapiens zinc finger, DHHC-type ... 33 1.8
S77554-1|AAB33983.1| 474|Homo sapiens GABAA receptor beta 2 sub... 32 2.4
S77553-1|AAB33982.1| 512|Homo sapiens GABAA receptor beta 2 sub... 32 2.4
S67368-1|AAB29370.1| 474|Homo sapiens gamma-aminobutyric acid A... 32 2.4
BC105639-1|AAI05640.1| 474|Homo sapiens GABRB2 protein protein. 32 2.4
BC099719-1|AAH99719.1| 474|Homo sapiens GABRB2 protein protein. 32 2.4
BC099705-1|AAH99705.1| 474|Homo sapiens GABRB2 protein protein. 32 2.4
BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein. 32 3.2
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 31 4.2
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 31 4.2
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 31 4.2
BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein. 31 4.2
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 31 4.2
BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein. 31 4.2
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 31 4.2
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 31 4.2
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 31 4.2
X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor de... 31 7.4
BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor, n... 31 7.4
BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor, n... 31 7.4
AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein. 31 7.4
AB113647-1|BAD26751.1| 1475|Homo sapiens RGD, leucine-rich repea... 31 7.4
X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor ga... 30 9.8
AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein. 30 9.8
>BC012176-1|AAH12176.1| 311|Homo sapiens NKD2 protein protein.
Length = 311
Score = 33.1 bits (72), Expect = 1.4
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 260 NIRESESTVRIQADLQMNWIDKRLSW-NAGRVGLQHLAGVLGTLVEA*RGTAKRGCNHRR 436
NI + V ++ D + W + N G+V + ++ ++ T+ E NH
Sbjct: 108 NIDALQCDVSVEEDDRQEWTFTLYDFDNCGKVTREDMSSLMHTIYEV----VDASVNHSS 163
Query: 437 GTTLSAPVYLITAPSPGIKRLDISTPIFYAGXTIGPTTCRL 559
G++ + V L +P P KR + P AG PT CR+
Sbjct: 164 GSSKTLRVKLTVSPEPSSKRKE-GPP---AGQDREPTRCRM 200
>AF358137-1|AAK57486.1| 451|Homo sapiens naked cuticle-2 protein.
Length = 451
Score = 33.1 bits (72), Expect = 1.4
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 260 NIRESESTVRIQADLQMNWIDKRLSW-NAGRVGLQHLAGVLGTLVEA*RGTAKRGCNHRR 436
NI + V ++ D + W + N G+V + ++ ++ T+ E NH
Sbjct: 108 NIDALQCDVSVEEDDRQEWTFTLYDFDNCGKVTREDMSSLMHTIYEV----VDASVNHSS 163
Query: 437 GTTLSAPVYLITAPSPGIKRLDISTPIFYAGXTIGPTTCRL 559
G++ + V L +P P KR + P AG PT CR+
Sbjct: 164 GSSKTLRVKLTVSPEPSSKRKE-GPP---AGQDREPTRCRM 200
>AB062887-1|BAB70501.1| 451|Homo sapiens Dvl-binding protein NKD2
protein.
Length = 451
Score = 33.1 bits (72), Expect = 1.4
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 260 NIRESESTVRIQADLQMNWIDKRLSW-NAGRVGLQHLAGVLGTLVEA*RGTAKRGCNHRR 436
NI + V ++ D + W + N G+V + ++ ++ T+ E NH
Sbjct: 108 NIDALQCDVSVEEDDRQEWTFTLYDFDNCGKVTREDMSSLMHTIYEV----VDASVNHSS 163
Query: 437 GTTLSAPVYLITAPSPGIKRLDISTPIFYAGXTIGPTTCRL 559
G++ + V L +P P KR + P AG PT CR+
Sbjct: 164 GSSKTLRVKLTVSPEPSSKRKE-GPP---AGQDREPTRCRM 200
>BC021908-1|AAH21908.1| 485|Homo sapiens zinc finger, DHHC-type
containing 1 protein.
Length = 485
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -2
Query: 483 GDGAVIRYTGAESVVPRRWLQPRLAVPRQASTSVPRTPAKCCSPTLPA 340
G GA I+ + RR L P A P A +PRTPA C LPA
Sbjct: 393 GRGACIKCERLRPRIRRRGLGPPAAAP--ARRRIPRTPALCTPLALPA 438
>S77554-1|AAB33983.1| 474|Homo sapiens GABAA receptor beta 2
subunit protein.
Length = 474
Score = 32.3 bits (70), Expect = 2.4
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +2
Query: 89 YYSCYXFLLTCAIASAAECENATSLSLM---IDSLLATYDRDSPPD---SKIVVNLTLHL 250
Y+ + F L A A + +++SL+ +D LL YD PD + V + + +
Sbjct: 9 YFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDI 68
Query: 251 RHAN-IRESESTVRIQADLQMNWIDKRLSWN 340
+ + E + Q W DKRLS+N
Sbjct: 69 ASIDMVSEVNMDYTLTMYFQQAWRDKRLSYN 99
>S77553-1|AAB33982.1| 512|Homo sapiens GABAA receptor beta 2
subunit protein.
Length = 512
Score = 32.3 bits (70), Expect = 2.4
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +2
Query: 89 YYSCYXFLLTCAIASAAECENATSLSLM---IDSLLATYDRDSPPD---SKIVVNLTLHL 250
Y+ + F L A A + +++SL+ +D LL YD PD + V + + +
Sbjct: 9 YFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDI 68
Query: 251 RHAN-IRESESTVRIQADLQMNWIDKRLSWN 340
+ + E + Q W DKRLS+N
Sbjct: 69 ASIDMVSEVNMDYTLTMYFQQAWRDKRLSYN 99
>S67368-1|AAB29370.1| 474|Homo sapiens gamma-aminobutyric acid A
receptor beta 2 subunit protein.
Length = 474
Score = 32.3 bits (70), Expect = 2.4
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +2
Query: 89 YYSCYXFLLTCAIASAAECENATSLSLM---IDSLLATYDRDSPPD---SKIVVNLTLHL 250
Y+ + F L A A + +++SL+ +D LL YD PD + V + + +
Sbjct: 9 YFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDI 68
Query: 251 RHAN-IRESESTVRIQADLQMNWIDKRLSWN 340
+ + E + Q W DKRLS+N
Sbjct: 69 ASIDMVSEVNMDYTLTMYFQQAWRDKRLSYN 99
>BC105639-1|AAI05640.1| 474|Homo sapiens GABRB2 protein protein.
Length = 474
Score = 32.3 bits (70), Expect = 2.4
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +2
Query: 89 YYSCYXFLLTCAIASAAECENATSLSLM---IDSLLATYDRDSPPD---SKIVVNLTLHL 250
Y+ + F L A A + +++SL+ +D LL YD PD + V + + +
Sbjct: 9 YFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDI 68
Query: 251 RHAN-IRESESTVRIQADLQMNWIDKRLSWN 340
+ + E + Q W DKRLS+N
Sbjct: 69 ASIDMVSEVNMDYTLTMYFQQAWRDKRLSYN 99
>BC099719-1|AAH99719.1| 474|Homo sapiens GABRB2 protein protein.
Length = 474
Score = 32.3 bits (70), Expect = 2.4
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +2
Query: 89 YYSCYXFLLTCAIASAAECENATSLSLM---IDSLLATYDRDSPPD---SKIVVNLTLHL 250
Y+ + F L A A + +++SL+ +D LL YD PD + V + + +
Sbjct: 9 YFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDI 68
Query: 251 RHAN-IRESESTVRIQADLQMNWIDKRLSWN 340
+ + E + Q W DKRLS+N
Sbjct: 69 ASIDMVSEVNMDYTLTMYFQQAWRDKRLSYN 99
>BC099705-1|AAH99705.1| 474|Homo sapiens GABRB2 protein protein.
Length = 474
Score = 32.3 bits (70), Expect = 2.4
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +2
Query: 89 YYSCYXFLLTCAIASAAECENATSLSLM---IDSLLATYDRDSPPD---SKIVVNLTLHL 250
Y+ + F L A A + +++SL+ +D LL YD PD + V + + +
Sbjct: 9 YFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDI 68
Query: 251 RHAN-IRESESTVRIQADLQMNWIDKRLSWN 340
+ + E + Q W DKRLS+N
Sbjct: 69 ASIDMVSEVNMDYTLTMYFQQAWRDKRLSYN 99
>BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein.
Length = 465
Score = 31.9 bits (69), Expect = 3.2
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +2
Query: 110 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RES 274
LL A+ A+ N L+ D L+ YD + P + VVN++L L N+ E
Sbjct: 11 LLLLAVCLGAQGRNQEE-RLLAD-LMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNER 68
Query: 275 ESTVRIQADLQMNWIDKRLSWN 340
E + ++M W D RL W+
Sbjct: 69 EEALTTNVWIEMQWCDYRLRWD 90
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 122 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 280
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 281 TVRIQADLQMNWIDKRLSWNAGR 349
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 122 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 280
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 281 TVRIQADLQMNWIDKRLSWNAGR 349
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 122 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 280
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 281 TVRIQADLQMNWIDKRLSWNAGR 349
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 122 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 280
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 281 TVRIQADLQMNWIDKRLSWNAGR 349
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 122 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 280
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 281 TVRIQADLQMNWIDKRLSWNAGR 349
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 122 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 280
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 281 TVRIQADLQMNWIDKRLSWNAGR 349
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 122 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 280
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 281 TVRIQADLQMNWIDKRLSWNAGR 349
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 122 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 280
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 281 TVRIQADLQMNWIDKRLSWNAGR 349
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 122 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 280
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 281 TVRIQADLQMNWIDKRLSWNAGR 349
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor delta
subunit protein.
Length = 517
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 215 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 355
+ + V L L L + +++E E T+ ++ W D RL WNA G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 215 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 355
+ + V L L L + +++E E T+ ++ W D RL WNA G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 215 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 355
+ + V L L L + +++E E T+ ++ W D RL WNA G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein.
Length = 517
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 215 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 355
+ + V L L L + +++E E T+ ++ W D RL WNA G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>AB113647-1|BAD26751.1| 1475|Homo sapiens RGD, leucine-rich repeat,
tropomodulin and proline-rich containing protein
protein.
Length = 1475
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 314 WIDKRLSWNAGRVGLQHLAGVLGTLVEA*RGTAKRGC 424
W+ R W AGR GL AGV +L RGC
Sbjct: 432 WMTGRADWRAGRGGLGPPAGVANSLPPQLFAAVSRGC 468
>X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor gamma
chain precursor protein.
Length = 520
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 334
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 335 WN 340
W+
Sbjct: 92 WD 93
>AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein.
Length = 520
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 334
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 335 WN 340
W+
Sbjct: 92 WD 93
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,861,637
Number of Sequences: 237096
Number of extensions: 2162379
Number of successful extensions: 4546
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4542
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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