BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_O08
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 33 0.23
07_03_1136 + 24218601-24218734,24218769-24219906 32 0.71
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 31 0.94
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 31 0.94
03_05_0292 + 22846273-22846377,22847161-22847823 31 0.94
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.2
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 31 1.2
06_03_0292 + 19207029-19207940 31 1.6
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 25 2.6
07_03_0177 - 14770777-14772045 30 2.9
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983 30 2.9
01_01_0570 - 4231100-4232560 30 2.9
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 29 3.8
09_02_0327 - 7284829-7284889,7284946-7286126 29 3.8
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 29 3.8
01_03_0270 + 14445240-14445464,14445490-14445655,14446193-144463... 29 3.8
09_04_0241 + 15962439-15962795,15962809-15963102 29 5.0
07_01_1207 + 11511754-11513865 29 5.0
07_01_0479 + 3606663-3607448 29 5.0
03_02_0514 + 9038606-9039790,9040211-9040432,9040548-9040655,904... 29 5.0
02_03_0381 - 18339290-18339994,18340083-18340103,18341925-183419... 29 5.0
01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982 29 5.0
03_05_0663 + 26546810-26547304 25 6.5
10_07_0152 + 13439178-13439517,13440072-13440229,13440431-134404... 29 6.6
08_01_0059 - 394001-394708 29 6.6
07_03_0558 + 19461369-19462448 29 6.6
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 29 6.6
04_03_0212 + 12697854-12698549,12698655-12698930,12698991-126990... 29 6.6
02_01_0077 - 546033-546223,546314-546566,546635-546865,547165-54... 29 6.6
01_01_0083 + 631196-631675 29 6.6
12_02_0848 + 23636478-23638058 28 8.7
10_08_0490 + 18279370-18279732,18280776-18280834,18281642-18282728 28 8.7
09_04_0093 - 14550806-14552452 28 8.7
06_03_1506 + 30641428-30642168 28 8.7
06_01_0601 + 4337575-4340149,4340566-4340978 28 8.7
03_03_0032 + 13927959-13930040,13930322-13930798 28 8.7
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 25 9.3
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 23 9.4
01_01_0796 + 6190931-6192745 23 9.5
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 33.5 bits (73), Expect = 0.23
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 714 PXXXXLPXGAXRATGXGPXPXPXPAPXAPXPXDRXPXRGXXXLXLAPGXGTPXXXPSXP 890
P LP GA G G P P P AP P P P P P+ P
Sbjct: 303 PPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAP 361
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 258 GXXGXPPGGGGGGXXLXXGGG 320
G G PGGGGGG L GGG
Sbjct: 193 GGPGRAPGGGGGGGGLGGGGG 213
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +1
Query: 466 GGGXPPXXGXXXXXNRXXXXPAARPXGXXLRXPPSPXXXGXXAXRRRXGGGXXXAXGAAR 645
GGG P P G L PP G R GGG G A
Sbjct: 140 GGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAP 199
Query: 646 XGPGXXAGXXXSXGXXXPP 702
G G G G P
Sbjct: 200 GGGGGGGGLGGGGGEGGAP 218
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 31.5 bits (68), Expect = 0.94
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +2
Query: 752 DGXXPXAPPXPRXXSPXPXGPXPXPRXXXAXXRXXPXDPXXRPXXP 889
D P P P +P P P P PR R P P P P
Sbjct: 55 DSPPPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPP 100
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = -2
Query: 892 GGXXGXXXGVPXPGAXXSXXXPRXGXRSXGXGAXGAGXGXGXGPXPVARXAPXGRXXXXG 713
GG G G PG G R G G G G G G G + GR G
Sbjct: 37 GGGVGGRGGRGPPGGGGGRGYEPGGGRGYGGGGGGGGRGYGGGGGGGGYESGGGRGYGGG 96
Query: 712 VGXXEXXXXRG 680
E RG
Sbjct: 97 GRGYESGGGRG 107
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/57 (36%), Positives = 21/57 (36%)
Frame = -3
Query: 888 GXXGRXXGSXGXXRXXAXXXRGXGXGPXGXGLXXRGXGGAXGXXPSHAGRPXGGXGR 718
G GR G G RG G G G G G GG G P P GG GR
Sbjct: 8 GGRGRGRGRGGGRGGGGGDGRGGGYGGAGGG----GVGGRGGRGP-----PGGGGGR 55
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 31.5 bits (68), Expect = 0.94
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -3
Query: 888 GXXGRXXGSXGXXRXXAXXXRGXGXGPXGXGLXXRGXGGAXGXXPSHAGRPXGGXGRXAX 709
G GR G G R G G G G RG GGA G H G G
Sbjct: 49 GGGGRGRGGGGGGRGDGARDGGGARGGGGRGA--RGGGGARGGGGRHGGEAATGAEARRL 106
Query: 708 XPXRXAGA 685
R A A
Sbjct: 107 PDVRGAAA 114
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 135 PXPXKXXTXPPPKXXXGGFPPPPQXXXSPXXPLFXKXXXXXGXXGXPPGGG 287
P P PPP G PPPP SP P G PP GG
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPP-PPGGKKGGPPPPPPKGG 385
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 317 PPXX*XXPPPPPPRGGXXXPXXXXXFXKXGGXG*XTXLGGGGETP 183
PP PPPPPP G P K GG GG P
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 135 PXPXKXXTXPPPKXXXGGFPPPPQXXXSPXXPLFXKXXXXXGXXGXPPGGGGGG 296
P P PPP G PPPP P P PPGG GG
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPP----PKGPSPPPPPPPGGKKGG 376
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -1
Query: 317 PPXX*XXPPPPPPRGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLWGGGG 156
PP PP PP GG GG G GGGG GGGG
Sbjct: 351 PPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPPPYHGGGG 404
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Frame = +3
Query: 162 PPPKXXXGGFPP-PPQXXXSPXXPLFXKXXXXXGXXGXPPG--GGGGGXXLXXGGGP 323
PPP GG PP P P + G PP GG GG + GGGP
Sbjct: 338 PPPSSYGGGPGSYPPSYGAPPPNPPY-SGGAPGGQGSLPPSYDGGYGGRPMPGGGGP 393
>06_03_0292 + 19207029-19207940
Length = 303
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGG 270
GAPP PPPPPPR G
Sbjct: 49 GAPPTPPLPPPPPPPRFG 66
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 24.6 bits (51), Expect(2) = 2.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 296 PPPPPPRGGXXXP 258
PPPPPP G P
Sbjct: 85 PPPPPPTNGTLTP 97
Score = 23.8 bits (49), Expect(2) = 2.6
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1
Query: 329 VXGAPPXX*XXPPPPPP 279
V PP PPPPPP
Sbjct: 71 VDRTPPPTPPSPPPPPP 87
>07_03_0177 - 14770777-14772045
Length = 422
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 242 FXKXGGXG*XTXLGGGGETPXXXLWGGGGXXLXG 141
F K GG G LGGGG GGGG + G
Sbjct: 355 FGKGGGLGGGGGLGGGGGGGGGGFGGGGGSGIGG 388
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 234 FXKXXXXXGXXGXPPGGGGGGXXLXXGGG 320
F K G G GGGGGG GGG
Sbjct: 355 FGKGGGLGGGGGLGGGGGGGGGGFGGGGG 383
>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
Length = 448
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -3
Query: 825 GXGXGPX-GXGLXXRGXGGAXGXXPSHAGRPXGGXGRXAXXPXRXAGA 685
G G GP G G G GG G G GG G R AGA
Sbjct: 264 GVGAGPGAGTGAITGGGGGGKGGGGGGGGNTGGGIGGSTGGGGRGAGA 311
>01_01_0570 - 4231100-4232560
Length = 486
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/62 (29%), Positives = 22/62 (35%)
Frame = -2
Query: 892 GGXXGXXXGVPXPGAXXSXXXPRXGXRSXGXGAXGAGXGXGXGPXPVARXAPXGRXXXXG 713
GG G G+ G + G + G G GAG G G G GR G
Sbjct: 133 GGGVGAGGGLRGGGGVGAGGGGGFGGGAGGGGGIGAGGGFGGGAGAGGGVGGGGRFGGGG 192
Query: 712 VG 707
+G
Sbjct: 193 MG 194
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 267 GXPPGGGGGGXXLXXGGGP 323
G P GGGGGG GGGP
Sbjct: 6 GNPRGGGGGGPRGFGGGGP 24
>09_02_0327 - 7284829-7284889,7284946-7286126
Length = 413
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = -1
Query: 341 KKKXVXGA---PPXX*XXPPPPPPRG 273
K++ + GA PP PPPPPPRG
Sbjct: 44 KERIIFGAHPPPPPPPPPPPPPPPRG 69
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 267 GXPPGGGGGGXXLXXGGGP 323
G P GGGGGG GGGP
Sbjct: 14 GNPRGGGGGGPRGCGGGGP 32
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 274 PRGGGGGGXX*XXGGAPXTXFFFXPR 351
PRGGGGGG GG P + PR
Sbjct: 16 PRGGGGGGPRGCGGGGPRSGGGGGPR 41
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 258 GXXGXPPGGGGGGXXLXXGGGP 323
G G P G GGGG GGGP
Sbjct: 19 GGGGGPRGCGGGGPRSGGGGGP 40
>01_03_0270 +
14445240-14445464,14445490-14445655,14446193-14446341,
14446634-14446674,14447683-14447755
Length = 217
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = +3
Query: 162 PPPKXXXGGFPPPPQXXXSPXXPLF--XKXXXXXGXXGXPPGGGGGGXXLXXGGGP 323
P P GG PPPP P P+ + G GG G GGP
Sbjct: 13 PSPPPSCGGIPPPPSRRPRPPHPVVDGVRAVLLDTSGGRGHVGGAAGATGGAAGGP 68
>09_04_0241 + 15962439-15962795,15962809-15963102
Length = 216
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 810 PXGXGLXXRGXGGAXGXXPSHAGRPXGGXGRXAXXPXRXAGA 685
P GL R G G PSH P GG R AGA
Sbjct: 43 PCARGLRRRVGGAPVGGFPSHRPVPLGGQPRHMFLAGESAGA 84
>07_01_1207 + 11511754-11513865
Length = 703
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 304 RXXPPPPPPGGXPXXP 257
R PPPPPP G P P
Sbjct: 12 RPPPPPPPPAGAPTEP 27
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Frame = +3
Query: 714 PXXXXLPXGAXRATGXGPXPXPXPAPXAPXPXDRXPXR----GXXXLXLAPGXGTPXXXP 881
P P G A GP P P P P P R G + PG P P
Sbjct: 184 PIPFQRPPGVPPAFPGGPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRP 243
Query: 882 SXPP 893
PP
Sbjct: 244 GMPP 247
>03_02_0514 +
9038606-9039790,9040211-9040432,9040548-9040655,
9041608-9041802,9041905-9042153,9042525-9042672,
9042673-9042779,9043311-9043475,9044506-9045948
Length = 1273
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 258 GXXGXPPGGGGGGXXLXXGGG 320
G G P GGGGGG GGG
Sbjct: 93 GGAGGPLGGGGGGWGAGGGGG 113
>02_03_0381 -
18339290-18339994,18340083-18340103,18341925-18341982,
18342084-18342220,18342480-18342650
Length = 363
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/58 (27%), Positives = 19/58 (32%)
Frame = +3
Query: 162 PPPKXXXGGFPPPPQXXXSPXXPLFXKXXXXXGXXGXPPGGGGGGXXLXXGGGPXNXF 335
PPP G PPP +P G PG GGG G P + +
Sbjct: 199 PPPWSPHSGVPPPWNPHSAPPSQGLYPHPPSYGPRNYNPGQGGGRMNYGPRGRPDSPY 256
>01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982
Length = 301
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 783 GXGGAXGXXPSHAGRPXGG 727
G GG+ G PSH G P GG
Sbjct: 80 GGGGSSGTTPSHGGGPSGG 98
>03_05_0663 + 26546810-26547304
Length = 164
Score = 25.0 bits (52), Expect(2) = 6.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 228 PLFXKXXXXXGXXGXPPGGGGGG 296
P K G G PGGGGGG
Sbjct: 40 PAGRKPSVQPGYPGTNPGGGGGG 62
Score = 22.2 bits (45), Expect(2) = 6.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 273 PPGGGGGGXXLXXGGG 320
P GGGGGG G G
Sbjct: 56 PGGGGGGGIPTIPGFG 71
>10_07_0152 +
13439178-13439517,13440072-13440229,13440431-13440477,
13441115-13441178,13441600-13442237,13442328-13442562
Length = 493
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 267 GXPPGGGGGGXXLXXGGGPXNXFF 338
G GGGGGG + GGP FF
Sbjct: 10 GTSGGGGGGGGAVPEAGGPEIAFF 33
>08_01_0059 - 394001-394708
Length = 235
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 773 PPXPRXXSPXPXGPXPXPRXXXAXXRXXPXDPXXRPXXP 889
PP PR P P P P PR P P RP P
Sbjct: 4 PPPPRRAPPPPATPPPPPR-----RAPPPPSPPIRPPPP 37
>07_03_0558 + 19461369-19462448
Length = 359
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 888 GXXGRXXGSXGXXRXXAXXXRGXGXGPXGXGLXXRGXGGAXGXXPSHAGRPXGGXG 721
G G G G A G G G G G G GG G H G G G
Sbjct: 105 GGGGLGGGQGGGFGGGAGAGGGAGGGLGGGGGFGGGGGGGLGGGGGHGGGFGAGGG 160
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 732 PXGAXRATGXGPXPXPXPAPXAPXPXDRXPXRGXXXLXLAPGXGTPXXXPSXPP 893
P + +T GP P P P AP P P P P PS PP
Sbjct: 140 PSASPPSTPGGPAPTPTPTRPAPSPSPTGPP--------TPSPTNPNLEPSPPP 185
>04_03_0212 +
12697854-12698549,12698655-12698930,12698991-12699038,
12699659-12699715,12700965-12701163,12702267-12702373,
12702586-12702759,12702844-12703083,12703638-12703693,
12704499-12704622
Length = 658
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 162 PPPKXXXGGFPPPPQXXXSPXXPLFXKXXXXXGXXGXPPGGGGGGXXLXXGGGP 323
PPP P P PL G G GGGGGG G GP
Sbjct: 24 PPPPTSAPRLPRLAANLSRPP-PLAISSPGCDGGGGGGGGGGGGGWWRQGGSGP 76
>02_01_0077 -
546033-546223,546314-546566,546635-546865,547165-547331,
547369-548008
Length = 493
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = +3
Query: 81 LLTWCYSLVXXKXXNXKIPXPXKXXTXPPPKXXXGGFPPPPQXXXSPXXPL 233
L+ W +SL+ P P PP PP P SP PL
Sbjct: 13 LVAWHFSLITMAAAQLSPPQPPDDQYDDPPMPGLPVSPPSPGYSDSPEPPL 63
>01_01_0083 + 631196-631675
Length = 159
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 135 PXPXKXXTXPPPKXXXGGFPPPPQXXXSPXXPLFXKXXXXXGXXGXPPGGGGGG 296
P P PPP G+ PP S P PP GGGGG
Sbjct: 37 PTPVTTDCPPPPSTPSSGYSYPPPSSSSSNTPPSSSSYWNY----PPPQGGGGG 86
>12_02_0848 + 23636478-23638058
Length = 526
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 329 VXGAPPXX*XXPPPPPPRGG 270
+ +PP PPPPPPR G
Sbjct: 70 IDASPPPPSTSPPPPPPRRG 89
>10_08_0490 + 18279370-18279732,18280776-18280834,18281642-18282728
Length = 502
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 868 GVPXPGAXXSXXXPRXGXRSXGXGAXGAGXGXGXGPXPVARXAPXG 731
G GA S G G G GAG G G GP A A G
Sbjct: 10 GSSDSGAAASGAAAGAGGGVGGGGVGGAGAGAGGGPPKSASAAAGG 55
>09_04_0093 - 14550806-14552452
Length = 548
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 304 RXXPPPPPPGGXPXXP 257
R PPPPPPG P P
Sbjct: 11 RRPPPPPPPGHPPNLP 26
>06_03_1506 + 30641428-30642168
Length = 246
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 267 GXPPGGGGGGXXLXXGGGPXN 329
G PGGGGGG GGG N
Sbjct: 204 GGGPGGGGGGAGGGGGGGSYN 224
>06_01_0601 + 4337575-4340149,4340566-4340978
Length = 995
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 295 PPPPPPGGXP 266
PPPPPPGG P
Sbjct: 743 PPPPPPGGKP 752
>03_03_0032 + 13927959-13930040,13930322-13930798
Length = 852
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 279 GGGGGGXXLXXGGGPXNXFF 338
GGGGGG L GGG FF
Sbjct: 37 GGGGGGGGLGNGGGGSASFF 56
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 25.0 bits (52), Expect(2) = 9.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 320 APPXX*XXPPPPPP 279
APP PPPPPP
Sbjct: 256 APPPQSVRPPPPPP 269
Score = 21.4 bits (43), Expect(2) = 9.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPP PR G
Sbjct: 292 PPPPLPRAG 300
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 23.4 bits (48), Expect(2) = 9.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 317 PPXX*XXPPPPPP 279
PP PPPPPP
Sbjct: 218 PPRPVRPPPPPPP 230
Score = 23.0 bits (47), Expect(2) = 9.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 296 PPPPPPR 276
PPPPPPR
Sbjct: 226 PPPPPPR 232
>01_01_0796 + 6190931-6192745
Length = 604
Score = 23.4 bits (48), Expect(2) = 9.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 317 PPXX*XXPPPPPP 279
PP PPPPPP
Sbjct: 230 PPFVADQPPPPPP 242
Score = 23.0 bits (47), Expect(2) = 9.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPPPP G
Sbjct: 238 PPPPPPAAG 246
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,277,595
Number of Sequences: 37544
Number of extensions: 474234
Number of successful extensions: 11748
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7725
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -