Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_O08
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein. 30 0.13
BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1, ... 30 0.13
BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1 r... 30 0.13
BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein. 30 0.13
AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1, ... 30 0.13
AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1, ... 30 0.13
AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase nu... 30 0.13
AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1, ... 30 0.13
AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein. 30 0.13
AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1, ... 30 0.13
BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein. 35 0.35
BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein. 35 0.35
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 34 0.61
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 34 0.61
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 34 0.61
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 34 0.61
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 34 0.61
AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related matrix-... 34 0.61
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 28 0.89
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 28 0.89
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 28 0.89
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 28 0.89
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 28 0.89
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 28 0.89
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 28 0.89
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 28 0.89
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 28 0.90
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 28 0.90
AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear ... 28 0.91
AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear r... 28 0.92
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 32 2.4
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 32 2.4
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 32 2.4
BC048216-1|AAH48216.1| 620|Homo sapiens deltex homolog 1 (Droso... 28 4.2
AF053700-1|AAC06246.1| 620|Homo sapiens deltex protein. 28 4.2
U41371-1|AAA97461.1| 872|Homo sapiens spliceosome associated pr... 27 5.3
BX537771-1|CAD97834.1| 799|Homo sapiens hypothetical protein pr... 27 5.4
X64624-1|CAA45907.1| 331|Homo sapiens RDC-1 protein. 31 5.6
U10063-1|AAA57161.1| 423|Homo sapiens POU domain factor protein. 31 5.6
L20433-1|AAA65605.1| 420|Homo sapiens octamer binding transcrip... 31 5.6
BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein pr... 31 5.6
BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein. 31 5.6
AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4, tr... 31 5.6
AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrom... 31 5.6
AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protei... 31 5.6
AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein. 31 5.6
DQ173561-1|ABA00478.2| 64|Homo sapiens SHANK3 protein. 30 9.9
AL121749-3|CAC10185.1| 694|Homo sapiens frizzled homolog 8 (Dro... 30 9.9
AB043703-1|BAB41064.1| 694|Homo sapiens seven-transmembrane rec... 30 9.9
>Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 29.9 bits (64), Expect(2) = 0.13
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 296 PPPPPP-RGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLWGGGG 156
PPPPPP RG GG G +GGGG P GG G
Sbjct: 716 PPPPPPFRGARGGRSGGGPPNGRGGPG-GGMVGGGGHRPHEGPGGGMG 762
Score = 25.4 bits (53), Expect(2) = 0.13
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGG 270
G P PPPPPRGG
Sbjct: 659 GGPVGPRLLGPPPPPRGG 676
>BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect(2) = 0.13
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 296 PPPPPP-RGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLWGGGG 156
PPPPPP RG GG G +GGGG P GG G
Sbjct: 716 PPPPPPFRGARGGRSGGGPPNGRGGPG-GGMVGGGGHRPHEGPGGGMG 762
Score = 25.4 bits (53), Expect(2) = 0.13
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGG 270
G P PPPPPRGG
Sbjct: 659 GGPVGPRLLGPPPPPRGG 676
>BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect(2) = 0.13
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 296 PPPPPP-RGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLWGGGG 156
PPPPPP RG GG G +GGGG P GG G
Sbjct: 716 PPPPPPFRGARGGRSGGGPPNGRGGPG-GGMVGGGGHRPHEGPGGGMG 762
Score = 25.4 bits (53), Expect(2) = 0.13
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGG 270
G P PPPPPRGG
Sbjct: 659 GGPVGPRLLGPPPPPRGG 676
>BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein.
Length = 940
Score = 29.9 bits (64), Expect(2) = 0.13
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 296 PPPPPP-RGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLWGGGG 156
PPPPPP RG GG G +GGGG P GG G
Sbjct: 716 PPPPPPFRGARGGRSGGGPPNGRGGPG-GGMVGGGGHRPHEGPGGGMG 762
Score = 25.4 bits (53), Expect(2) = 0.13
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGG 270
G P PPPPPRGG
Sbjct: 659 GGPVGPRLLGPPPPPRGG 676
>AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect(2) = 0.13
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 296 PPPPPP-RGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLWGGGG 156
PPPPPP RG GG G +GGGG P GG G
Sbjct: 716 PPPPPPFRGARGGRSGGGPPNGRGGPG-GGMVGGGGHRPHEGPGGGMG 762
Score = 25.4 bits (53), Expect(2) = 0.13
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGG 270
G P PPPPPRGG
Sbjct: 659 GGPVGPRLLGPPPPPRGG 676
>AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect(2) = 0.13
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 296 PPPPPP-RGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLWGGGG 156
PPPPPP RG GG G +GGGG P GG G
Sbjct: 716 PPPPPPFRGARGGRSGGGPPNGRGGPG-GGMVGGGGHRPHEGPGGGMG 762
Score = 25.4 bits (53), Expect(2) = 0.13
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGG 270
G P PPPPPRGG
Sbjct: 659 GGPVGPRLLGPPPPPRGG 676
>AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase
nuclear targeting subunit protein.
Length = 940
Score = 29.9 bits (64), Expect(2) = 0.13
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 296 PPPPPP-RGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLWGGGG 156
PPPPPP RG GG G +GGGG P GG G
Sbjct: 716 PPPPPPFRGARGGRSGGGPPNGRGGPG-GGMVGGGGHRPHEGPGGGMG 762
Score = 25.4 bits (53), Expect(2) = 0.13
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGG 270
G P PPPPPRGG
Sbjct: 659 GGPVGPRLLGPPPPPRGG 676
>AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect(2) = 0.13
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 296 PPPPPP-RGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLWGGGG 156
PPPPPP RG GG G +GGGG P GG G
Sbjct: 716 PPPPPPFRGARGGRSGGGPPNGRGGPG-GGMVGGGGHRPHEGPGGGMG 762
Score = 25.4 bits (53), Expect(2) = 0.13
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGG 270
G P PPPPPRGG
Sbjct: 659 GGPVGPRLLGPPPPPRGG 676
>AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 29.9 bits (64), Expect(2) = 0.13
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 296 PPPPPP-RGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLWGGGG 156
PPPPPP RG GG G +GGGG P GG G
Sbjct: 716 PPPPPPFRGARGGRSGGGPPNGRGGPG-GGMVGGGGHRPHEGPGGGMG 762
Score = 25.4 bits (53), Expect(2) = 0.13
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGG 270
G P PPPPPRGG
Sbjct: 659 GGPVGPRLLGPPPPPRGG 676
>AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect(2) = 0.13
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 296 PPPPPP-RGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLWGGGG 156
PPPPPP RG GG G +GGGG P GG G
Sbjct: 716 PPPPPPFRGARGGRSGGGPPNGRGGPG-GGMVGGGGHRPHEGPGGGMG 762
Score = 25.4 bits (53), Expect(2) = 0.13
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGG 270
G P PPPPPRGG
Sbjct: 659 GGPVGPRLLGPPPPPRGG 676
>BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 35.1 bits (77), Expect = 0.35
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +3
Query: 729 LPXGAXRATGXGPXPXPXPAP-XAPXPXDRXPXRGXXXLXLAP--GXGTPXXXPSXPP 893
LP + ATG GP P P P P P P + G + P G P P PP
Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNHSRPHGMGGPNMPPPGPSGVPPGMPGQPP 277
>BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 35.1 bits (77), Expect = 0.35
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +3
Query: 729 LPXGAXRATGXGPXPXPXPAP-XAPXPXDRXPXRGXXXLXLAP--GXGTPXXXPSXPP 893
LP + ATG GP P P P P P P + G + P G P P PP
Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNHSRPHGMGGPNMPPPGPSGVPPGMPGQPP 277
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +3
Query: 729 LPXGAXRATGXGPXPXPXPAP---XAPXPXDRXPXRGXXXLXLAPGXGTPXXXPSXPP 893
LP + ATG GP P P P P AP R G + G P P PP
Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP 277
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +3
Query: 729 LPXGAXRATGXGPXPXPXPAP---XAPXPXDRXPXRGXXXLXLAPGXGTPXXXPSXPP 893
LP + ATG GP P P P P AP R G + G P P PP
Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP 277
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +3
Query: 729 LPXGAXRATGXGPXPXPXPAP---XAPXPXDRXPXRGXXXLXLAPGXGTPXXXPSXPP 893
LP + ATG GP P P P P AP R G + G P P PP
Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP 277
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +3
Query: 729 LPXGAXRATGXGPXPXPXPAP---XAPXPXDRXPXRGXXXLXLAPGXGTPXXXPSXPP 893
LP + ATG GP P P P P AP R G + G P P PP
Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP 277
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +3
Query: 729 LPXGAXRATGXGPXPXPXPAP---XAPXPXDRXPXRGXXXLXLAPGXGTPXXXPSXPP 893
LP + ATG GP P P P P AP R G + G P P PP
Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP 277
>AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
a4 var protein.
Length = 1164
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +3
Query: 729 LPXGAXRATGXGPXPXPXPAP---XAPXPXDRXPXRGXXXLXLAPGXGTPXXXPSXPP 893
LP + ATG GP P P P P AP R G + G P P PP
Sbjct: 177 LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP 234
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 27.9 bits (59), Expect(2) = 0.89
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPPPPRGG
Sbjct: 310 PPPPPPRGG 318
Score = 24.6 bits (51), Expect(2) = 0.89
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 572 GEGGXRRXXPX-GRAAGXXXXRLXXXXXPXXGGXPPPXG--GRXGXRXXEKXXGPP 414
G GG R P G R P G PPP G GR G R PP
Sbjct: 257 GRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 27.9 bits (59), Expect(2) = 0.89
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPPPPRGG
Sbjct: 310 PPPPPPRGG 318
Score = 24.6 bits (51), Expect(2) = 0.89
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 572 GEGGXRRXXPX-GRAAGXXXXRLXXXXXPXXGGXPPPXG--GRXGXRXXEKXXGPP 414
G GG R P G R P G PPP G GR G R PP
Sbjct: 257 GRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 27.9 bits (59), Expect(2) = 0.89
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPPPPRGG
Sbjct: 310 PPPPPPRGG 318
Score = 24.6 bits (51), Expect(2) = 0.89
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 572 GEGGXRRXXPX-GRAAGXXXXRLXXXXXPXXGGXPPPXG--GRXGXRXXEKXXGPP 414
G GG R P G R P G PPP G GR G R PP
Sbjct: 257 GRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 27.9 bits (59), Expect(2) = 0.89
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPPPPRGG
Sbjct: 310 PPPPPPRGG 318
Score = 24.6 bits (51), Expect(2) = 0.89
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 572 GEGGXRRXXPX-GRAAGXXXXRLXXXXXPXXGGXPPPXG--GRXGXRXXEKXXGPP 414
G GG R P G R P G PPP G GR G R PP
Sbjct: 257 GRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 27.9 bits (59), Expect(2) = 0.89
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPPPPRGG
Sbjct: 310 PPPPPPRGG 318
Score = 24.6 bits (51), Expect(2) = 0.89
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 572 GEGGXRRXXPX-GRAAGXXXXRLXXXXXPXXGGXPPPXG--GRXGXRXXEKXXGPP 414
G GG R P G R P G PPP G GR G R PP
Sbjct: 257 GRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 27.9 bits (59), Expect(2) = 0.89
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPPPPRGG
Sbjct: 310 PPPPPPRGG 318
Score = 24.6 bits (51), Expect(2) = 0.89
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 572 GEGGXRRXXPX-GRAAGXXXXRLXXXXXPXXGGXPPPXG--GRXGXRXXEKXXGPP 414
G GG R P G R P G PPP G GR G R PP
Sbjct: 257 GRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 27.9 bits (59), Expect(2) = 0.89
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPPPPRGG
Sbjct: 310 PPPPPPRGG 318
Score = 24.6 bits (51), Expect(2) = 0.89
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 572 GEGGXRRXXPX-GRAAGXXXXRLXXXXXPXXGGXPPPXG--GRXGXRXXEKXXGPP 414
G GG R P G R P G PPP G GR G R PP
Sbjct: 257 GRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 27.9 bits (59), Expect(2) = 0.89
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPPPPRGG
Sbjct: 310 PPPPPPRGG 318
Score = 24.6 bits (51), Expect(2) = 0.89
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 572 GEGGXRRXXPX-GRAAGXXXXRLXXXXXPXXGGXPPPXG--GRXGXRXXEKXXGPP 414
G GG R P G R P G PPP G GR G R PP
Sbjct: 257 GRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 27.9 bits (59), Expect(2) = 0.90
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPPPPRGG
Sbjct: 288 PPPPPPRGG 296
Score = 24.6 bits (51), Expect(2) = 0.90
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 572 GEGGXRRXXPX-GRAAGXXXXRLXXXXXPXXGGXPPPXG--GRXGXRXXEKXXGPP 414
G GG R P G R P G PPP G GR G R PP
Sbjct: 235 GRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 290
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 27.9 bits (59), Expect(2) = 0.90
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPPPPRGG
Sbjct: 275 PPPPPPRGG 283
Score = 24.6 bits (51), Expect(2) = 0.90
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 572 GEGGXRRXXPX-GRAAGXXXXRLXXXXXPXXGGXPPPXG--GRXGXRXXEKXXGPP 414
G GG R P G R P G PPP G GR G R PP
Sbjct: 222 GRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 277
>AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 379
Score = 27.9 bits (59), Expect(2) = 0.91
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPPPPRGG
Sbjct: 286 PPPPPPRGG 294
Score = 24.6 bits (51), Expect(2) = 0.91
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 572 GEGGXRRXXPX-GRAAGXXXXRLXXXXXPXXGGXPPPXG--GRXGXRXXEKXXGPP 414
G GG R P G R P G PPP G GR G R PP
Sbjct: 233 GRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 288
>AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 306
Score = 27.9 bits (59), Expect(2) = 0.92
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 296 PPPPPPRGG 270
PPPPPPRGG
Sbjct: 241 PPPPPPRGG 249
Score = 24.6 bits (51), Expect(2) = 0.92
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 572 GEGGXRRXXPX-GRAAGXXXXRLXXXXXPXXGGXPPPXG--GRXGXRXXEKXXGPP 414
G GG R P G R P G PPP G GR G R PP
Sbjct: 188 GRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 243
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/130 (23%), Positives = 34/130 (26%), Gaps = 1/130 (0%)
Frame = +1
Query: 415 GGPXXFSXXRXPXRPPXGGGXPPXXGXXXXXNRXXXXPAARPXGXXLRXPPSPXXXGXXA 594
G P F + P RPP G PP + P A P R PP G
Sbjct: 225 GPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPF 284
Query: 595 XRRRXGGGXXXAXGAARXGPGXXAG-XXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXX 771
+ G G G G G PP G P
Sbjct: 285 GQPPL-GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHL 343
Query: 772 PXPXPXXQPP 801
P P P PP
Sbjct: 344 PGPPPGAPPP 353
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/130 (23%), Positives = 34/130 (26%), Gaps = 1/130 (0%)
Frame = +1
Query: 415 GGPXXFSXXRXPXRPPXGGGXPPXXGXXXXXNRXXXXPAARPXGXXLRXPPSPXXXGXXA 594
G P F + P RPP G PP + P A P R PP G
Sbjct: 225 GPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPF 284
Query: 595 XRRRXGGGXXXAXGAARXGPGXXAG-XXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXX 771
+ G G G G G PP G P
Sbjct: 285 GQPPL-GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHL 343
Query: 772 PXPXPXXQPP 801
P P P PP
Sbjct: 344 PGPPPGAPPP 353
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 32.3 bits (70), Expect = 2.4
Identities = 31/130 (23%), Positives = 34/130 (26%), Gaps = 1/130 (0%)
Frame = +1
Query: 415 GGPXXFSXXRXPXRPPXGGGXPPXXGXXXXXNRXXXXPAARPXGXXLRXPPSPXXXGXXA 594
G P F + P RPP G PP + P A P R PP G
Sbjct: 225 GPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPF 284
Query: 595 XRRRXGGGXXXAXGAARXGPGXXAG-XXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXX 771
+ G G G G G PP G P
Sbjct: 285 GQPPL-GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHL 343
Query: 772 PXPXPXXQPP 801
P P P PP
Sbjct: 344 PGPPPGAPPP 353
>BC048216-1|AAH48216.1| 620|Homo sapiens deltex homolog 1
(Drosophila) protein.
Length = 620
Score = 28.3 bits (60), Expect(2) = 4.2
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 295 PPPPPPGGXP 266
PPPPPPGG P
Sbjct: 233 PPPPPPGGPP 242
Score = 21.8 bits (44), Expect(2) = 4.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2
Query: 292 PPPPPGGXPXXP 257
P PPPG P P
Sbjct: 269 PAPPPGAPPRSP 280
>AF053700-1|AAC06246.1| 620|Homo sapiens deltex protein.
Length = 620
Score = 28.3 bits (60), Expect(2) = 4.2
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 295 PPPPPPGGXP 266
PPPPPPGG P
Sbjct: 233 PPPPPPGGPP 242
Score = 21.8 bits (44), Expect(2) = 4.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2
Query: 292 PPPPPGGXPXXP 257
P PPPG P P
Sbjct: 269 PAPPPGAPPRSP 280
>U41371-1|AAA97461.1| 872|Homo sapiens spliceosome associated
protein protein.
Length = 872
Score = 27.1 bits (57), Expect(2) = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRG 273
G PP PPPPPP G
Sbjct: 75 GLPPLQPPPPPPPPPPG 91
Score = 22.6 bits (46), Expect(2) = 5.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 296 PPPPPPRGGXXXP 258
PPPPPP G P
Sbjct: 85 PPPPPPGLGLGFP 97
>BX537771-1|CAD97834.1| 799|Homo sapiens hypothetical protein
protein.
Length = 799
Score = 27.1 bits (57), Expect(2) = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRG 273
G PP PPPPPP G
Sbjct: 100 GLPPLQPPPPPPPPPPG 116
Score = 22.6 bits (46), Expect(2) = 5.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 296 PPPPPPRGGXXXP 258
PPPPPP G P
Sbjct: 110 PPPPPPGLGLGFP 122
>X64624-1|CAA45907.1| 331|Homo sapiens RDC-1 protein.
Length = 331
Score = 31.1 bits (67), Expect = 5.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 258 GXXGXPPGGGGGGXXLXXGGGP 323
G G PGGGGGG GGGP
Sbjct: 72 GPGGGGPGGGGGGAAGGGGGGP 93
>U10063-1|AAA57161.1| 423|Homo sapiens POU domain factor protein.
Length = 423
Score = 31.1 bits (67), Expect = 5.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 258 GXXGXPPGGGGGGXXLXXGGGP 323
G G PGGGGGG GGGP
Sbjct: 161 GPGGGGPGGGGGGGPGGGGGGP 182
>L20433-1|AAA65605.1| 420|Homo sapiens octamer binding
transcription factor 1 protein.
Length = 420
Score = 31.1 bits (67), Expect = 5.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 258 GXXGXPPGGGGGGXXLXXGGGP 323
G G PGGGGGG GGGP
Sbjct: 158 GPGGGGPGGGGGGGPGGGGGGP 179
>BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein
protein.
Length = 510
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/62 (27%), Positives = 20/62 (32%)
Frame = +1
Query: 652 PGXXAGXXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXXPXPXPXXQPPPXGTXXPPAX 831
PG S G PR +R S P + P P P + PP PP
Sbjct: 316 PGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGR 375
Query: 832 GG 837
G
Sbjct: 376 SG 377
>BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein.
Length = 403
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/62 (27%), Positives = 20/62 (32%)
Frame = +1
Query: 652 PGXXAGXXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXXPXPXPXXQPPPXGTXXPPAX 831
PG S G PR +R S P + P P P + PP PP
Sbjct: 316 PGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGR 375
Query: 832 GG 837
G
Sbjct: 376 SG 377
>AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4,
transcription factor 1 protein.
Length = 419
Score = 31.1 bits (67), Expect = 5.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 258 GXXGXPPGGGGGGXXLXXGGGP 323
G G PGGGGGG GGGP
Sbjct: 157 GGPGGGPGGGGGGGPGGGGGGP 178
>AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrome
protein interacting protein protein.
Length = 312
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/62 (27%), Positives = 20/62 (32%)
Frame = +1
Query: 652 PGXXAGXXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXXPXPXPXXQPPPXGTXXPPAX 831
PG S G PR +R S P + P P P + PP PP
Sbjct: 125 PGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGR 184
Query: 832 GG 837
G
Sbjct: 185 SG 186
>AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protein
protein.
Length = 503
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/62 (27%), Positives = 20/62 (32%)
Frame = +1
Query: 652 PGXXAGXXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXXPXPXPXXQPPPXGTXXPPAX 831
PG S G PR +R S P + P P P + PP PP
Sbjct: 316 PGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGR 375
Query: 832 GG 837
G
Sbjct: 376 SG 377
>AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein.
Length = 503
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/62 (27%), Positives = 20/62 (32%)
Frame = +1
Query: 652 PGXXAGXXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXXPXPXPXXQPPPXGTXXPPAX 831
PG S G PR +R S P + P P P + PP PP
Sbjct: 316 PGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGR 375
Query: 832 GG 837
G
Sbjct: 376 SG 377
>DQ173561-1|ABA00478.2| 64|Homo sapiens SHANK3 protein.
Length = 64
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +3
Query: 756 GXGPXPXPXPAPXA-PXPXDRXPXR 827
G GP P P PAP A P P R P R
Sbjct: 6 GPGPAPGPGPAPPAPPAPPPRGPKR 30
>AL121749-3|CAC10185.1| 694|Homo sapiens frizzled homolog 8
(Drosophila) protein.
Length = 694
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = -1
Query: 320 APPXX*XXPPP---PPPRGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLWGGGG 156
+PP PPP PP G P + GG G GGGG+ GGGG
Sbjct: 162 SPPRRLPPPPPGEQPPSGSGHGRPPGARPPHRGGGRG-----GGGGDAAAPPARGGGG 214
>AB043703-1|BAB41064.1| 694|Homo sapiens seven-transmembrane
receptor Frizzled-8 protein.
Length = 694
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = -1
Query: 320 APPXX*XXPPP---PPPRGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLWGGGG 156
+PP PPP PP G P + GG G GGGG+ GGGG
Sbjct: 162 SPPRRLPPPPPGEQPPSGSGHGRPPGARPPHRGGGRG-----GGGGDAAAPPARGGGG 214
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,253,766
Number of Sequences: 237096
Number of extensions: 2205452
Number of successful extensions: 30835
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 6665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20519
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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