Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_O08
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.28
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.28
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.48
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.64
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.64
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.64
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 30 2.6
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 2.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.6
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 2.6
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 2.6
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.6
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 2.6
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 3.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.5
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 4.5
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 4.5
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 29 4.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.5
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.9
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 5.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.9
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 5.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.9
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 5.9
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 28 7.8
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 28 7.8
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +3
Query: 156 TXPPPKXXXGGFPP-PPQXXXSPXXPLFXKXXXXXGXXGXPPGGGGGGXXLXXGGGP 323
T PPP GG P PP P G G PPG GG G GGP
Sbjct: 152 TGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP 208
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +3
Query: 156 TXPPPKXXXGGFPP-PPQXXXSPXXPLFXKXXXXXGXXGXPPGGGGGGXXLXXGGGP 323
T PPP GG P PP P G G PPG GG G GGP
Sbjct: 432 TGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP 488
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.48
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 135 PXPXKXXTXPPPKXXXGGFPPPPQXXXSPXXP 230
P P PPP GG PPPP +P P
Sbjct: 86 PPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPP 117
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +3
Query: 135 PXPXKXXTXPPPKXXXGGFPPPP--QXXXSPXXPLF 236
P P PPP GG PPPP P P+F
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.64
Identities = 18/64 (28%), Positives = 22/64 (34%)
Frame = +1
Query: 685 GXXXPPRXXRRXXXXSXGAPXVRRXXAXXPXPXPXXQPPPXGTXXPPAXGGRXXSXXAXG 864
G PP + G+P R + P P P PP G+ PP GG
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS-PPTGSLPPPQAGGSPPPAGTGS 328
Query: 865 PRXP 876
P P
Sbjct: 329 PPPP 332
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = +3
Query: 141 PXKXXTXPPPKXXXGGFPPPPQXXXSPXXPLFXKXXXXXGXXGXPPGGGGGGXXLXXGGG 320
P T PP GG PPPP+ SP P + G PP GG G
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPR-AGSPPPPPPPRGSPPTGSL-PPPQAGGSPPPAGTGSP 329
Query: 321 P 323
P
Sbjct: 330 P 330
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGGXXXP 258
G+PP PPPPP GG P
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPP 291
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/49 (28%), Positives = 16/49 (32%)
Frame = +3
Query: 141 PXKXXTXPPPKXXXGGFPPPPQXXXSPXXPLFXKXXXXXGXXGXPPGGG 287
P + PP G PPPP+ P P G PP G
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.64
Identities = 18/64 (28%), Positives = 22/64 (34%)
Frame = +1
Query: 685 GXXXPPRXXRRXXXXSXGAPXVRRXXAXXPXPXPXXQPPPXGTXXPPAXGGRXXSXXAXG 864
G PP + G+P R + P P P PP G+ PP GG
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS-PPTGSLPPPQAGGSPPPAGTGS 349
Query: 865 PRXP 876
P P
Sbjct: 350 PPPP 353
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = +3
Query: 141 PXKXXTXPPPKXXXGGFPPPPQXXXSPXXPLFXKXXXXXGXXGXPPGGGGGGXXLXXGGG 320
P T PP GG PPPP+ SP P + G PP GG G
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPR-AGSPPPPPPPRGSPPTGSL-PPPQAGGSPPPAGTGSP 350
Query: 321 P 323
P
Sbjct: 351 P 351
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGGXXXP 258
G+PP PPPPP GG P
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPP 312
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/49 (28%), Positives = 16/49 (32%)
Frame = +3
Query: 141 PXKXXTXPPPKXXXGGFPPPPQXXXSPXXPLFXKXXXXXGXXGXPPGGG 287
P + PP G PPPP+ P P G PP G
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.64
Identities = 18/64 (28%), Positives = 22/64 (34%)
Frame = +1
Query: 685 GXXXPPRXXRRXXXXSXGAPXVRRXXAXXPXPXPXXQPPPXGTXXPPAXGGRXXSXXAXG 864
G PP + G+P R + P P P PP G+ PP GG
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS-PPTGSLPPPQAGGSPPPAGTGS 334
Query: 865 PRXP 876
P P
Sbjct: 335 PPPP 338
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = +3
Query: 141 PXKXXTXPPPKXXXGGFPPPPQXXXSPXXPLFXKXXXXXGXXGXPPGGGGGGXXLXXGGG 320
P T PP GG PPPP+ SP P + G PP GG G
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPR-AGSPPPPPPPRGSPPTGSL-PPPQAGGSPPPAGTGSP 335
Query: 321 P 323
P
Sbjct: 336 P 336
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGGXXXP 258
G+PP PPPPP GG P
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPP 297
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/49 (28%), Positives = 16/49 (32%)
Frame = +3
Query: 141 PXKXXTXPPPKXXXGGFPPPPQXXXSPXXPLFXKXXXXXGXXGXPPGGG 287
P + PP G PPPP+ P P G PP G
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGGXXXP 258
G PP PPPPPP GG P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPP 771
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 295 PPPPPPGGXPXXP 257
PPPPPPGG P P
Sbjct: 760 PPPPPPGGCPPPP 772
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 295 PPPPPPGGXP 266
PPPPPPGG P
Sbjct: 727 PPPPPPGGLP 736
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 295 PPPPPPGGXP 266
PPPPPPGG P
Sbjct: 743 PPPPPPGGLP 752
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 135 PXPXKXXTXPPPKXXXGGF-----PPPPQXXXSPXXPL 233
P P PPP GGF PPPP +P P+
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGGXXXP 258
G PP PPPPPP GG P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPP 771
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 295 PPPPPPGGXPXXP 257
PPPPPPGG P P
Sbjct: 760 PPPPPPGGCPPPP 772
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 295 PPPPPPGGXP 266
PPPPPPGG P
Sbjct: 727 PPPPPPGGLP 736
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 295 PPPPPPGGXP 266
PPPPPPGG P
Sbjct: 743 PPPPPPGGLP 752
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 135 PXPXKXXTXPPPKXXXGGF-----PPPPQXXXSPXXPL 233
P P PPP GGF PPPP +P P+
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +3
Query: 162 PPPKXXXGGFPPPPQXXXSPXXPLFXKXXXXXGXXGXPPGGGGG--GXXLXXGGGP 323
PP G F PPP +P P G G PP GG G G GGP
Sbjct: 381 PPQSGPPGAFAPPPSAFGAPQGP------GGPGGYGPPPPGGPGAPGSYGPPQGGP 430
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 323 GAPPXX*XXPPPPPPRGGXXXP 258
G PP PPPPPP GG P
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPP 354
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 295 PPPPPPGGXPXXP 257
PPPPPPGG P P
Sbjct: 343 PPPPPPGGCPPPP 355
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 295 PPPPPPGGXP 266
PPPPPPGG P
Sbjct: 310 PPPPPPGGLP 319
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 295 PPPPPPGGXP 266
PPPPPPGG P
Sbjct: 326 PPPPPPGGLP 335
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 135 PXPXKXXTXPPPKXXXGGF-----PPPPQXXXSPXXPL 233
P P PPP GGF PPPP +P P+
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 382
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 729 LPXGAXRATGXGPXPXPXPAPXAPXPXDR-XPXRGXXXLXLAPGXGTPXXXP 881
LP R GP P P PAP P P RG PG P P
Sbjct: 751 LPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 729 LPXGAXRATGXGPXPXPXPAPXAPXPXDR-XPXRGXXXLXLAPGXGTPXXXP 881
LP R GP P P PAP P P RG PG P P
Sbjct: 751 LPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/91 (25%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Frame = +1
Query: 610 GGGXXXAXGAARXGPGXXAGXXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXXPX-PXP 786
GGG G GP G G P GA P P P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP 151
Query: 787 XXQPPPXGTXXPPAXGGRXXSXXA-XGPRXP 876
P P G PP G + + GP P
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGP 182
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 778 PXPXXQPPPXGTXXPPAXGGRXXSXXAXGPRXP 876
P P P P G PP G S A GP+ P
Sbjct: 217 PGPAGPPGPPGPGGPPGDAGGAGSDGAPGPQGP 249
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/91 (25%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Frame = +1
Query: 610 GGGXXXAXGAARXGPGXXAGXXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXXPX-PXP 786
GGG G GP G G P GA P P P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP 151
Query: 787 XXQPPPXGTXXPPAXGGRXXSXXA-XGPRXP 876
P P G PP G + + GP P
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGP 182
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 729 LPXGAXRATGXGPXPXPXPAPXAPXPXDR-XPXRGXXXLXLAPGXGTPXXXP 881
LP R GP P P PAP P P RG PG P P
Sbjct: 751 LPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/91 (25%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Frame = +1
Query: 610 GGGXXXAXGAARXGPGXXAGXXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXXPX-PXP 786
GGG G GP G G P GA P P P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP 151
Query: 787 XXQPPPXGTXXPPAXGGRXXSXXA-XGPRXP 876
P P G PP G + + GP P
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGP 182
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/91 (25%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Frame = +1
Query: 610 GGGXXXAXGAARXGPGXXAGXXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXXPX-PXP 786
GGG G GP G G P GA P P P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP 151
Query: 787 XXQPPPXGTXXPPAXGGRXXSXXA-XGPRXP 876
P P G PP G + + GP P
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGP 182
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 729 LPXGAXRATGXGPXPXPXPAPXAPXPXDR-XPXRGXXXLXLAPGXGTPXXXP 881
LP R GP P P PAP P P RG PG P P
Sbjct: 751 LPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = -3
Query: 888 GXXGRXXGSXGXXRXXAXXXRGXGXGPXGXGL-XXRGXGGAXGXXPSHAGRPXGGXG 721
G G G G G G GP G G+ G GG G + G GG G
Sbjct: 118 GYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGG 174
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/85 (24%), Positives = 26/85 (30%)
Frame = +1
Query: 610 GGGXXXAXGAARXGPGXXAGXXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXXPXPXPX 789
GGG GP AG + G P + + G P V+ P P
Sbjct: 95 GGGGGNCEACCLPGPAGPAGAPGNPGR--PGKPGAPGLPGNPGKPPVQPCEPITPPPCKP 152
Query: 790 XQPPPXGTXXPPAXGGRXXSXXAXG 864
P G PP G + A G
Sbjct: 153 CPDGPAGPPGPPGAPGDAGTNGAPG 177
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/86 (25%), Positives = 24/86 (27%)
Frame = +1
Query: 610 GGGXXXAXGAARXGPGXXAGXXXSXGXXXPPRXXRRXXXXSXGAPXVRRXXAXXPXPXPX 789
GGG GPG G + G P + GA P P
Sbjct: 110 GGGCTGCCNPGPPGPGGRPGKPGTPGKPGAP--------GNPGASGKGAAAPCEPSTPPP 161
Query: 790 XQPPPXGTXXPPAXGGRXXSXXAXGP 867
QP P G PP G GP
Sbjct: 162 CQPCPAGPPGPPGPDGTPGEPGGPGP 187
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 258 GXXGXPPGGGGGGXXLXXGGG 320
G G P GGGGGG GGG
Sbjct: 322 GVGGGPVGGGGGGAKSGGGGG 342
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = -1
Query: 347 GXKKKXVXGAPPXX*XXPPPPPPRGGXXXPXXXXXFXKXGGXG*XTXLGGGGETPXXXLW 168
G K + GAPP P PP P+G P K G G G G
Sbjct: 213 GEPGKVINGAPPGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLPGPH 272
Query: 167 GGGG 156
GG G
Sbjct: 273 GGTG 276
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 258 GXXGXPPGGGGGGXXLXXGGG 320
G G P GGGGGG GGG
Sbjct: 216 GVGGGPVGGGGGGAKSGGGGG 236
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 317 PPXX*XXPPPPPPRGGXXXP 258
PP PPPPPP GG P
Sbjct: 583 PPMLGGPPPPPPPPGGLMGP 602
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 341 KKKXVXGAPPXX*XXPPPPPPR 276
KKK V GAP PPPP P+
Sbjct: 39 KKKDVSGAPSAESPPPPPPAPK 60
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 773 PPXPRXXSPXPXGPXPXPRXXXAXXRXXPXDPXXRPXXP 889
PP P P P P PR A P P RP P
Sbjct: 336 PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 374
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 135 PXPXKXXTXPPPKXXXGGFPPPPQXXXSPXXP 230
P P P P GG PPPP P P
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPP 802
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 773 PPXPRXXSPXPXGPXPXPRXXXAXXRXXPXDPXXRPXXP 889
PP P P P P PR A P P RP P
Sbjct: 346 PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 384
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +3
Query: 699 SXXPTPXXXXLPXGAXRATGXGPXPXPXPAPXAPXP 806
S P+P P +TG GP P P P P P
Sbjct: 1444 SPGPSPNGPSNPSVPESSTGGGPSPGPAPDPGTSDP 1479
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.9
Identities = 26/80 (32%), Positives = 28/80 (35%), Gaps = 2/80 (2%)
Frame = -1
Query: 491 PXXGGXPPPXGGRXGXRXXEKXXGPPAXXXWWXXXXXXXXXXXXXXPRGXKKKXVXGAPP 312
P GG PPP GG G R GPP +G + G PP
Sbjct: 1554 PPMGGLPPPHGGMNGWRG-----GPPPPRG-------------GSHCQGPPP--LMGGPP 1593
Query: 311 XX*XXPP--PPPPRGGXXXP 258
PP PPPP GG P
Sbjct: 1594 PRLGMPPPGPPPPNGGPPPP 1613
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 135 PXPXKXXTXPPPKXXXGGFPPPPQXXXSPXXP 230
P P P P GG PPPP P P
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPP 802
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Frame = +1
Query: 415 GGPXXFSXXRXPXRPPXGGGXPPXXGXXXXXNRXXXXPAARPXGXXLRXPPSPXXXGXXA 594
GG P +P GGG PP AA P PP P G A
Sbjct: 19 GGAGSAGGCCPPSQPSCGGGAPPCSSSSYATGGGGGSYAAAP-ALPPPPPPPPAPIGGGA 77
Query: 595 XRRRXGGGXXXAXGAA-RXGPGXXAG 669
GG GA+ GP G
Sbjct: 78 GYAAPFGGPGPVGGASYSQGPQGFGG 103
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Frame = +1
Query: 415 GGPXXFSXXRXPXRPPXGGGXPPXXGXXXXXNRXXXXPAARPXGXXLRXPPSPXXXGXXA 594
GG P +P GGG PP AA P PP P G A
Sbjct: 19 GGAGSAGGCCPPSQPSCGGGAPPCSSSSYATGGGGGSYAAAP-ALPPPPPPPPAPIGGGA 77
Query: 595 XRRRXGGGXXXAXGAA-RXGPGXXAG 669
GG GA+ GP G
Sbjct: 78 GYAAPFGGPGPVGGASYSQGPQGFGG 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,531,122
Number of Sequences: 27780
Number of extensions: 257069
Number of successful extensions: 4128
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2784
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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