Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_O02
(799 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 87 3e-17
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 59 6e-09
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 30 3.2
BT024212-1|ABC86274.1| 1085|Drosophila melanogaster RE28791p pro... 29 7.4
BT001578-1|AAN71333.1| 1002|Drosophila melanogaster RE23622p pro... 29 7.4
AY134669-1|AAN39118.1| 968|Drosophila melanogaster peptidylprol... 29 7.4
AY051595-1|AAK93019.1| 685|Drosophila melanogaster GH23813p pro... 29 7.4
AE014297-4231|AAF56787.2| 685|Drosophila melanogaster CG1866-PB... 29 7.4
AE014297-4230|AAF56786.1| 970|Drosophila melanogaster CG1866-PA... 29 7.4
AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA ... 29 7.4
BT001282-1|AAN71038.1| 491|Drosophila melanogaster AT07931p pro... 29 9.7
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 86.6 bits (205), Expect = 3e-17
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = +3
Query: 111 LDGRWNFRAHFAKLGPRLMATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVW-C 287
+D R +F+AH + TA +L+R++PNVGGP ARRL + V ++ LY AP+W C
Sbjct: 724 IDRRLSFKAHARYASKKAAMTAAALARIMPNVGGPRLPARRLLVAVSKATLLYAAPIWSC 783
Query: 288 HALTRQNVAALRRPQRAIAVRAIRGYRTVSFEAACLLAGAPPWDLE 425
+ + + + R R +A+R IRG+RT+S +AA L+G P DL+
Sbjct: 784 VSTKKTYLDSARAVSRTMALRLIRGFRTISDDAAHALSGITPIDLD 829
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 59.3 bits (137), Expect = 6e-09
Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +3
Query: 129 FRAHFAKLGPRLMATAGSLSRLLPNVGGPDQVARR-LYMGVVRSMALYGAPVWCHALTRQ 305
F H A L R+ G+L+R+L G ARR +Y G++ L+GAPVW T +
Sbjct: 747 FLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGLMAPCVLFGAPVWYD--TAE 804
Query: 306 NVAALRRP---QRAIAVRAIRGYRTVSFEAACLLAGAPPWDL 422
VAA RR QR I + + RTVS A +L GAPP DL
Sbjct: 805 QVAAQRRLASCQRLILLGCLSVCRTVSTVALQVLGGAPPLDL 846
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 30.3 bits (65), Expect = 3.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 552 PRLQHGPPRVEPPRSXYTFXGAPFPPRAEVATP 454
P +GPP+ PP Y GAP PP ++ P
Sbjct: 244 PSASYGPPKSAPPSQSY---GAPAPPSSKYGPP 273
>BT024212-1|ABC86274.1| 1085|Drosophila melanogaster RE28791p protein.
Length = 1085
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 304 RTSPRCDVRS-ARSRSGRSEDTAPSPSRRRACSPGR 408
R+ R RS AR R R++ PSP RRR SP R
Sbjct: 894 RSRSRSISRSRARRRGSRTKSRTPSPRRRRLPSPRR 929
>BT001578-1|AAN71333.1| 1002|Drosophila melanogaster RE23622p
protein.
Length = 1002
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 280 YGATP*PARTSPRCDVR-SARSRS-GRSEDTAPSPSRRRACSPGR 408
Y +P R SP D R RSRS R +D SPS+RR SPGR
Sbjct: 636 YPLSPIRGRGSPSGDRRRQQRSRSQNRRQD---SPSQRRQLSPGR 677
>AY134669-1|AAN39118.1| 968|Drosophila melanogaster peptidylprolyl
cis-trans isomerase protein.
Length = 968
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 280 YGATP*PARTSPRCDVR-SARSRS-GRSEDTAPSPSRRRACSPGR 408
Y +P R SP D R RSRS R +D SPS+RR SPGR
Sbjct: 602 YPLSPIRGRGSPSGDRRRQQRSRSQNRRQD---SPSQRRQLSPGR 643
>AY051595-1|AAK93019.1| 685|Drosophila melanogaster GH23813p
protein.
Length = 685
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 280 YGATP*PARTSPRCDVR-SARSRS-GRSEDTAPSPSRRRACSPGR 408
Y +P R SP D R RSRS R +D SPS+RR SPGR
Sbjct: 319 YPLSPIRGRGSPSGDRRRQQRSRSQNRRQD---SPSQRRQLSPGR 360
>AE014297-4231|AAF56787.2| 685|Drosophila melanogaster CG1866-PB,
isoform B protein.
Length = 685
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 280 YGATP*PARTSPRCDVR-SARSRS-GRSEDTAPSPSRRRACSPGR 408
Y +P R SP D R RSRS R +D SPS+RR SPGR
Sbjct: 319 YPLSPIRGRGSPSGDRRRQQRSRSQNRRQD---SPSQRRQLSPGR 360
>AE014297-4230|AAF56786.1| 970|Drosophila melanogaster CG1866-PA,
isoform A protein.
Length = 970
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 280 YGATP*PARTSPRCDVR-SARSRS-GRSEDTAPSPSRRRACSPGR 408
Y +P R SP D R RSRS R +D SPS+RR SPGR
Sbjct: 604 YPLSPIRGRGSPSGDRRRQQRSRSQNRRQD---SPSQRRQLSPGR 645
>AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA
protein.
Length = 1929
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 304 RTSPRCDVRS-ARSRSGRSEDTAPSPSRRRACSPGR 408
R+ R RS AR R R++ PSP RRR SP R
Sbjct: 1262 RSRSRSISRSRARRRGSRTKSRTPSPRRRRLPSPRR 1297
>BT001282-1|AAN71038.1| 491|Drosophila melanogaster AT07931p
protein.
Length = 491
Score = 28.7 bits (61), Expect = 9.7
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 280 YGATP*PARTSPRCDVR-SARSRS-GRSEDTAPSPSRRRACSPGR 408
Y +P R SP D R RSRS R +D SPS+RR SPGR
Sbjct: 133 YPLSPIRGRGSPGGDRRRQQRSRSQNRRQD---SPSQRRQLSPGR 174
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,070,178
Number of Sequences: 53049
Number of extensions: 597650
Number of successful extensions: 2644
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2632
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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