Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_N21
(779 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 28 1.3
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 28 1.3
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 27 2.3
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 3.0
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 27 3.0
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.0
SPBC30B4.03c |||conserved protein |Schizosaccharomyces pombe|chr... 27 4.0
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 26 5.3
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 7.0
SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|c... 26 7.0
SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces pomb... 26 7.0
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 9.2
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 25 9.2
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 622 KVTLYKTCIRPVMTYASVVFAHAGPHTLKILSNYSIPVLQDNRRXPRGSSGT 777
++ L +C+ V +YA ++ AH+ + L N ++ +NR GS T
Sbjct: 2 RLVLLFSCVLAVSSYAEIILAHSDENLLSRTKN-NLSKWNENRLYDYGSKST 52
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 307 FRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNN 423
F+ W+ P+ S +L ++G PP + LS L ++ N
Sbjct: 260 FQIWKAHNPPSSSKFILEQKGLPPESNLSSELVAAKLKN 298
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 109 VTSQPESRKAPPSPRLLFSLYINDIPRSPETHLALFA 219
+ +QP+ K PSP F L+ + RS ET+L +A
Sbjct: 47 IDTQPKEEKPEPSPSSPFGLFAYVVKRS-ETYLIQYA 82
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 537 DVGAECHPTVEGDA*IFDLRGPRYGLVEHRDWANG 433
DV A C +++ +DLR PR+ + DW NG
Sbjct: 336 DVLATC--SIDSSVHCWDLRSPRFPVNSFYDWHNG 368
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 27.1 bits (57), Expect = 3.0
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +2
Query: 95 AFPAPSRHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTP-PSTTRVGRRRCFID 271
+ P PS S + L + S+ + R+P RS P+TP TR ++
Sbjct: 75 SLPTPSSDKSSTSPFPYLKGSFDDRFSSTHSLTRQPSPRS-PLTPLKGNTRASPEIRYVS 133
Query: 272 DFRPQLPPWDSGSGS 316
DF P P++ S
Sbjct: 134 DFTPPSSPFEDMQAS 148
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 3.0
Identities = 43/171 (25%), Positives = 64/171 (37%), Gaps = 7/171 (4%)
Frame = +2
Query: 74 PISSRGNAFPAP-SRHSRSPARLRPLPXYYSVCI-STIYP-----GLRRPIWRSSPMTPP 232
P S+ + P P + S + PLP + C ST P L PI + P T
Sbjct: 197 PTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTST 256
Query: 233 STTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLG 412
S+T + P + S S +T T S+ V P ++ S
Sbjct: 257 SSTSIPIPPTSTSSTDTNSSPLPTTSTS-CTTSTSIPPTGNSTTPVTPTVPPTSTSS--- 312
Query: 413 ASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPS 565
+ TPPPP + S TS P S + +++ T+ TVPP+
Sbjct: 313 -TSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 362
Score = 26.6 bits (56), Expect = 4.0
Identities = 33/138 (23%), Positives = 52/138 (37%), Gaps = 8/138 (5%)
Frame = +2
Query: 74 PISSRGNAFPAP-SRHSRSPARLRPLPXYYSVCI-STIYPGLRRPIWRSSPMTPPSTTRV 247
P S+ + P P + S + PLP + C ST P +P PP++T
Sbjct: 253 PTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTS- 311
Query: 248 GRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVA----LRTPR*ASL--SRL 409
P P S +G+ +S L +S + TP ++ +
Sbjct: 312 -------STSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTST 364
Query: 410 GASITPPPPFAQSRCSTS 463
++ TPPPP + S TS
Sbjct: 365 SSTSTPPPPASTSSTGTS 382
>SPBC30B4.03c |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +2
Query: 368 VALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRY 547
+A R+ ++L + ++ +S S PY P S SP S ++ RY
Sbjct: 248 LAQRSGPTSALHKFATALQQQHQMQKSTSSNIPYANPAPSGFNGSPRNGDVASLASNYRY 307
Query: 548 ATVPPS 565
A PP+
Sbjct: 308 AKQPPT 313
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 26.2 bits (55), Expect = 5.3
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +1
Query: 184 PRSPETHLALFADDTAIYYSCRKKALLHRRL---QTAATTMGQWFRKWRIDINPTKSTAV 354
P++ + +LF+D++ + S +L ++ + F++ + ST +
Sbjct: 326 PQTQQNESSLFSDNSMVNSSSNSFSLFPNATLPNPPSSELLTTPFQQIKPPSQVFMSTGL 385
Query: 355 LFKRGRPPNTTLSIPLPTRRVNNPAPAVRP 444
L K+ RP PLP + P+ VRP
Sbjct: 386 LSKQHRPRKNINFTPLPPSTPSKPSTFVRP 415
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +2
Query: 8 SLLYTH*WSRTHHTRLLVEPFVPISSRGNAFPAPSRHSRSPARLRPL 148
+LLY H W H+ L ++ + + + + + +PS R+R +
Sbjct: 94 NLLYKHGWREAHNEMLTMQLLLMLLNIADGWKSPSETVEQDFRVREI 140
>SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 571
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 489 FDLRGPRYGLVEHRDWANGGGGVIDAPSRERD 394
F+L Y L E +W GG + AP+ E D
Sbjct: 160 FELDVSNYPLPEGEEWMVGGSFGVMAPNNEED 191
>SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 25.8 bits (54), Expect = 7.0
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 583 PMICRRSKMSLXNKVTLYKTCIRPVMTYASVVFAHAGPH----TLKILSNYSIPVLQDNR 750
P+I RS S +K CIR TY + H + T+ + +S+P++Q +
Sbjct: 303 PLIQERSNSSKSGDFEHFKECIRSTKTY-HLFLKHTNTNVEYITMAFWAIFSLPMIQ--K 359
Query: 751 RXPRG 765
P+G
Sbjct: 360 ALPKG 364
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 317 GASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPP 436
GAS+ P R SS P AS++ +I PPP
Sbjct: 889 GASSAQPAAMSRTSSVSTLPPPPPTASMTASAPAIASPPP 928
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 25.4 bits (53), Expect = 9.2
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +1
Query: 355 LFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIP---WAPKVKYLGVTLDSRMTF 525
L ++ RP +L+ V+ AP++R ++ P W PK K G R
Sbjct: 408 LLEKLRPEMISLNADF-IGNVDRAAPSLRKAEAEEEKPPEEKWVPKAKARGKNSALRRYL 466
Query: 526 RPHIKTVRDR 555
R H + V D+
Sbjct: 467 RKHARNVVDQ 476
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,437,205
Number of Sequences: 5004
Number of extensions: 77097
Number of successful extensions: 252
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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