Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_N09
(801 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 61 1e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 56 3e-10
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 52 8e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 51 1e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 2e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 4e-08
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 49 6e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 49 6e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 48 8e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 48 8e-08
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 47 2e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 46 3e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 46 5e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 45 7e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 43 3e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 43 4e-06
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 8e-05
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 33 0.002
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.038
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.20
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.4
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 61.3 bits (142), Expect = 1e-11
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Frame = +1
Query: 115 NATSLSLMIDSLPATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 282
N +++S ++D+L YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 283 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 453
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 454 KRLDISTPISMQLDNWPNDMQTCTXQGSVLGCT---IVTKWIS 573
RL I M L+N+P D Q C Q G T ++ KW S
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKWNS 164
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.4 bits (130), Expect = 3e-10
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Frame = +1
Query: 91 IASAAECENATSLSLMIDSLPATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 249
I SA C + D L + Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 250 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 423
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 424 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
+ G V W + + + +P D QTC
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 52.8 bits (121), Expect = 4e-09
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Frame = +1
Query: 187 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 360
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 361 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 51.6 bits (118), Expect = 8e-09
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Frame = +1
Query: 109 CENATSLSLMIDSLPATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 267
C + D L + Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 268 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 441
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 442 VSWIKRLDISTPISMQLDNWPNDMQTC 522
V W + + ++ +P D QTC
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTC 163
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 51.2 bits (117), Expect = 1e-08
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Frame = +1
Query: 109 CENATSLSLMIDS---LPATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 273
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 274 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 444
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 445 SWIKRLDISTPISMQLDN--WPNDMQTCT 525
+ TP+ + D+ WP D+ CT
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCT 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 51.2 bits (117), Expect = 1e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
G Y V++NGS ++ + + + +P D Q C
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 51.2 bits (117), Expect = 1e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
G Y V++NGS ++ + + + +P D Q C
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 51.2 bits (117), Expect = 1e-08
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Frame = +1
Query: 187 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 360
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 361 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTC 167
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 51.2 bits (117), Expect = 1e-08
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +1
Query: 187 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 360
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 361 PDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
PD+VL NA A +A + + G V W + + ++ +P D QTC
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTC 167
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 50.8 bits (116), Expect = 1e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
G Y V++NGS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 190 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 366
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 367 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
+L N A + VS+ G V W+ + + ++ +P D Q C
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRC 145
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
G Y V+++GS ++ + M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHC 125
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 49.6 bits (113), Expect = 3e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
G Y V+++GS ++ + M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHC 125
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 49.6 bits (113), Expect = 3e-08
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Frame = +1
Query: 82 TCAIASAAECENATSLSLMIDSLPATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 240
+C +A + + D L + Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 241 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 414
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 415 ---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
+A + + G V W + + ++ +P D QTC
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTC 159
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 49.2 bits (112), Expect = 4e-08
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Frame = +1
Query: 124 SLSLMIDSLPATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 288
++++++++L Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 289 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 459
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 460 LDISTPISMQLDNWPNDMQTC 522
L I M+L N+P D Q+C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 48.8 bits (111), Expect = 6e-08
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 48.8 bits (111), Expect = 6e-08
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +1
Query: 268 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 432
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 433 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
G VSW + + ++ +P D Q+C
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSC 172
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHC 125
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 522
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHC 125
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 48.4 bits (110), Expect = 8e-08
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Frame = +1
Query: 115 NATSLSLMIDSLPATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 282
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 283 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 435
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 436 GSVSWIKRLDISTPISMQLDNWPNDMQTCTXQGSVLGCTI 555
GS++ RL I+ M L +P D Q C + G T+
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 163
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 47.2 bits (107), Expect = 2e-07
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Frame = +1
Query: 115 NATSLSLMIDSLPATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 282
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 283 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 435
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 436 GSVSWIKRLDISTPISMQLDNWPNDMQTCTXQGSVLGCTI 555
GS++ RL I+ M L +P D Q C + G T+
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 163
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 46.4 bits (105), Expect = 3e-07
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +1
Query: 268 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 441
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 442 VSWIKRLDISTPISMQLDNWPNDMQTC 522
++ + + + +P D Q C
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRC 162
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 45.6 bits (103), Expect = 5e-07
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Frame = +1
Query: 169 DSPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLV 339
++ D +V + L +R A I + + +Q + W+D+RL +N G T L
Sbjct: 52 ENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LT 110
Query: 340 SSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPND 510
+ R+W PD+ N + + R+ NGSV + R+ ++ M L +P D
Sbjct: 111 DASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLD 170
Query: 511 MQTCTXQGSVLGCT 552
Q C+ + + G T
Sbjct: 171 RQVCSLRMASYGWT 184
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 45.2 bits (102), Expect = 7e-07
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Frame = +1
Query: 112 ENATSLSLMIDSLPATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 279
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 280 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 447
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 448 WIKRLDISTPISMQLDNWPNDMQTC 522
+ + + +WP D C
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRC 183
Score = 25.0 bits (52), Expect = 0.82
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +3
Query: 516 DLHXSR--FGSRMHNSDEMDFXIDKRIYSM 599
D H R FGS +H+ +E++ +DK+ + M
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 43.2 bits (97), Expect = 3e-06
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +1
Query: 229 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 408
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 409 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTXQGSVLGCTIV 558
R R+S +GSV++ R + M L +P D Q CT + G T++
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVL 187
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 42.7 bits (96), Expect = 4e-06
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 6/134 (4%)
Frame = +1
Query: 169 DSPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLV 339
++ D VV + + +R + I + +Q + W+D+RL +N G T L
Sbjct: 52 ENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LT 110
Query: 340 SSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPND 510
+ R+W PD+ N + + R+ NGSV + R+ ++ M L +P D
Sbjct: 111 DASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLD 170
Query: 511 MQTCTXQGSVLGCT 552
Q C+ + + G T
Sbjct: 171 RQVCSLRMASYGWT 184
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 38.3 bits (85), Expect = 8e-05
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Frame = +1
Query: 280 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 432
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 433 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTXQGSVLGCTI 555
+GS++ RL I+ M L +P D Q C + G T+
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 102
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 33.5 bits (73), Expect = 0.002
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 9/147 (6%)
Frame = +1
Query: 112 ENATSLSLMIDSLPATYDRDSPP----DSKIVVNLTLHLRHANIRESESTVRIQADLQMN 279
E++ SL ++ P YD+ P IV L +I E T L +
Sbjct: 1 ESSLSLKDILPLNPKLYDKHRAPKFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLAQS 60
Query: 280 WIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSV 444
W D RL N E + +WRPD NA T + ++ + ++ ++
Sbjct: 61 WRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTL 120
Query: 445 SWIKRLDISTPISMQLDNWPNDMQTCT 525
++ +L + +M+ +++P+D Q C+
Sbjct: 121 LYMSKLTLVLSCAMKFESYPHDTQICS 147
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.5 bits (63), Expect = 0.038
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +1
Query: 190 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 351
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 352 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 516
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 517 TC 522
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.1 bits (57), Expect = 0.20
Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 10/144 (6%)
Frame = +1
Query: 151 PATYDRDSPP--DSKIVVNLTLHLRHANIRE-SESTVRIQADL--QMNWIDKRLSWNAGE 315
P YD+ PP D + V + H+ + E+++ AD+ W D RL
Sbjct: 45 PKLYDKMRPPKKDGQATV-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRLRLPENM 103
Query: 316 WGCSTWLVSS--ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPI 480
L + +WRPD NA + T + + + ++ ++ +L +
Sbjct: 104 TSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSC 163
Query: 481 SMQLDNWPNDMQTCTXQGSVLGCT 552
+M +P+D Q C Q L T
Sbjct: 164 AMNFLIYPHDTQECKLQMESLSHT 187
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 333 PSAAAPLPCVPTQS 292
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,197
Number of Sequences: 438
Number of extensions: 4614
Number of successful extensions: 83
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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