Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_N03
         (768 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0747 - 26867114-26867225,26868443-26868531,26869342-268693...    29   5.4  
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165...    29   5.4  
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558...    29   5.4  
12_02_1281 + 27523411-27523561,27523725-27523810,27524653-275247...    28   9.4  
08_01_0424 - 3746663-3746745,3747273-3747558,3747732-3748451           28   9.4  
04_04_0316 - 24338774-24339367                                         28   9.4  

>11_06_0747 -
           26867114-26867225,26868443-26868531,26869342-26869380,
           26869819-26870077,26870157-26870327,26870410-26870451,
           26870896-26871242,26871324-26871785,26871864-26872597,
           26872686-26872815
          Length = 794

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -2

Query: 455 STSLRSLIQVREALCYL*HFGRLPPLELTPKSFCTLALH 339
           ST LR ++QV + +  +   GR    ++ PK  CT+ALH
Sbjct: 710 STLLREVVQVDDIMALIHLLGRNSD-KIIPKQNCTVALH 747


>04_04_1015 -
           30115377-30115477,30115570-30115615,30116491-30116590,
           30116676-30116771,30119519-30119556,30119623-30119733,
           30119820-30119951,30120024-30120263,30120532-30120700,
           30120994-30121493,30121581-30121691,30121802-30122133,
           30122603-30122737,30122839-30122988,30123809-30123947
          Length = 799

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/48 (22%), Positives = 26/48 (54%)
 Frame = -2

Query: 764 GPVHQERYSNPH*QQAEEFENFREESSADFLQHEVIKRVQSCHSRSQS 621
           GP + + Y + + +  E+++++ E   +D +QH V +  +S    S +
Sbjct: 8   GPDYDDEYDDDYDEYDEDYDDYGETGHSDDIQHPVKEEKESSKKSSST 55


>04_04_1008 -
           30054674-30054774,30054867-30054912,30055788-30055887,
           30055973-30056068,30058816-30058853,30058920-30059030,
           30059117-30059248,30059321-30059560,30059829-30059997,
           30060291-30060790,30060878-30060988,30061099-30061430,
           30061900-30062034,30062136-30062285,30063106-30063244
          Length = 799

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/48 (22%), Positives = 26/48 (54%)
 Frame = -2

Query: 764 GPVHQERYSNPH*QQAEEFENFREESSADFLQHEVIKRVQSCHSRSQS 621
           GP + + Y + + +  E+++++ E   +D +QH V +  +S    S +
Sbjct: 8   GPDYDDEYDDDYDEYDEDYDDYGETGHSDDIQHPVKEEKESSKKSSST 55


>12_02_1281 +
           27523411-27523561,27523725-27523810,27524653-27524718,
           27524801-27524971,27525365-27525535,27525620-27525739,
           27525868-27526014,27526193-27526264,27526359-27526832,
           27526914-27527086,27527194-27527230
          Length = 555

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
 Frame = -2

Query: 752 QERYSNPH*QQAEEFENFREESSA-----DFLQHEVIKRVQSCHSRSQS 621
           +++ SN   ++A EF +   E +      D LQ EVI   ++CH + QS
Sbjct: 429 EDKESNNSDEKANEFTSVETEDTVSGLLYDTLQKEVIALRKACHEKDQS 477


>08_01_0424 - 3746663-3746745,3747273-3747558,3747732-3748451
          Length = 362

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 540 DECDKESGVSEDGERLGDRRVTGSSCTALRTAVAALYPFDDFVL 671
           DE D ++ +SE GE     ++ G S   LR  +A L  +DDF +
Sbjct: 260 DEADLDN-ISE-GENWATVQIRGRSVRLLREKIAELVGYDDFTM 301


>04_04_0316 - 24338774-24339367
          Length = 197

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -3

Query: 751 RNVTPIPTSSRPRSLKTSEKNPVPIFSSTKSSNGYRAATAVLRAVQEEP 605
           R+V  +P  +RP+     E+NP P  +S  SS+   +++  +R   EEP
Sbjct: 96  RSVRVLPWRARPQQPLPEEQNPPPQETSASSSS---SSSTHVRIAPEEP 141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,612,773
Number of Sequences: 37544
Number of extensions: 362197
Number of successful extensions: 1080
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)