Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_M23
(823 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 97 2e-20
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 93 3e-19
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 62 6e-10
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 58 8e-09
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 58 8e-09
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 58 1e-08
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 55 7e-08
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 42 4e-04
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 38 0.007
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 30 1.7
U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 28 7.0
U41557-1|AAA83300.1| 418|Caenorhabditis elegans Hypothetical pr... 28 7.0
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 28 9.3
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 28 9.3
U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical pr... 28 9.3
U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical pr... 28 9.3
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 96.7 bits (230), Expect = 2e-20
Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
Frame = +3
Query: 204 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 383
++ D +KAFD++ H+ L+ KL ++ L++ + ++LSNRSFR R+ T S + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 384 VPQGSALSPLLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMG 557
VPQG+ LSPLLF +Y+NDI +A FADDT +Y S K LQ+A +
Sbjct: 77 VPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYAS-TPKTESENNLQSALDAVV 135
Query: 558 QWFRKWRIDINPTKSTAVLFKRGR 629
W + ++ +N +K+ V + R
Sbjct: 136 DWTKGSKLTLNQSKTVHVTVGKRR 159
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 92.7 bits (220), Expect = 3e-19
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL I KL E+ + KR+ + + + Q GF+ HS V ++T I+ GLN +
Sbjct: 408 ISLLSPIAKLLEKAILKRIKNSIESPA----HQHGFKPEHSTTTAVIQVTNDIIGGLNMK 463
Query: 183 KPIPTGALF--FDIAKAFDKVWHNGLIYKLYN-MGVPDRLVLIIRDYLSNRSFRYRVEGT 353
P P A+ D+ AFDKV L L G+ ++ L + +YL R R +
Sbjct: 464 NP-PERAIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNH 522
Query: 354 RSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRL 533
S+ + GVPQGS +SP LF+ Y+ D+P +T L +ADD +I +K ++
Sbjct: 523 WSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKV 582
Query: 534 QTAATTMGQWFRKWRIDINPTKSTAVLF 617
Q + ++ ++ + I+ KST +F
Sbjct: 583 QLHIDEIAKYLKERGMSISAEKSTVTVF 610
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 61.7 bits (143), Expect = 6e-10
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Frame = +3
Query: 222 KAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGS 398
KAFD+V H+ L+ KL++ G+ D+LS+R+F +V H +++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 399 ALSPLLFSLYINDIPRS--PETHLALFADDTAIY 494
P LF ++IN + S P + FADD +Y
Sbjct: 62 VSGPFLFLIFINSLLLSVPPSISCSAFADDLKVY 95
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 58.0 bits (134), Expect = 8e-09
Identities = 44/146 (30%), Positives = 66/146 (45%)
Frame = +3
Query: 9 LLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKP 188
LLP + K++ + L R+ S ++ EQ GFR S + +H L LL + R
Sbjct: 628 LLPVLYKVFTKCLLNRMRR--SLDEAQPVEQAGFRRSFSTIDHIHSLQR--LLEVGREYQ 683
Query: 189 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPR 368
IP +F D KAFD V H + L G + ++++ N + + R
Sbjct: 684 IPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAV 742
Query: 369 HVTAGVPQGSALSPLLFSLYINDIPR 446
VT GV QG +SP LFS + + R
Sbjct: 743 PVTKGVRQGDPISPNLFSACLEHVFR 768
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 58.0 bits (134), Expect = 8e-09
Identities = 44/146 (30%), Positives = 66/146 (45%)
Frame = +3
Query: 9 LLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKP 188
LLP + K++ + L R+ S ++ EQ GFR S + +H L LL + R
Sbjct: 367 LLPVLYKVFTKCLLNRMRR--SLDEAQPVEQAGFRRSFSTIDHIHSLQR--LLEVGREYQ 422
Query: 189 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPR 368
IP +F D KAFD V H + L G + ++++ N + + R
Sbjct: 423 IPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAV 481
Query: 369 HVTAGVPQGSALSPLLFSLYINDIPR 446
VT GV QG +SP LFS + + R
Sbjct: 482 PVTKGVRQGDPISPNLFSACLEHVFR 507
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 57.6 bits (133), Expect = 1e-08
Identities = 44/146 (30%), Positives = 66/146 (45%)
Frame = +3
Query: 9 LLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKP 188
LLP + K++ + L R+ S ++ EQ GFR S + +H L LL + R
Sbjct: 457 LLPVLYKVFTKCLLNRMRR--SLDEAQPVEQAGFRRSFSTIDHIHSLQR--LLEVGREYQ 512
Query: 189 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPR 368
IP +F D KAFD V H + L G + ++++ N + + R
Sbjct: 513 IPLTLVFIDFKKAFDTVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAV 571
Query: 369 HVTAGVPQGSALSPLLFSLYINDIPR 446
VT GV QG +SP LFS + + R
Sbjct: 572 PVTKGVRQGDPISPNLFSACLEHVFR 597
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 54.8 bits (126), Expect = 7e-08
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Frame = +3
Query: 261 KLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSPLLFSLYIND 437
KL G+ +++L NR+F ++ S+ + +++GVPQGS PLLF L+IN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 438 --IPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAV 611
I +P +++ FADD I+++ +Q + + W + + + PTKS A+
Sbjct: 899 LLIDLAPTINISCFADDVKIFHTD------PTIIQNSIDIIVSWSKLNELPLAPTKS-AL 951
Query: 612 LFKRGRPPNTTLSI 653
L R N + S+
Sbjct: 952 LALGTRNKNQSYSV 965
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +3
Query: 204 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTA 380
+ F ++ AFDKV H LI KL + V L R +S ++F +V +H
Sbjct: 890 IHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTFSVQVNDHLESEKHNCQI 949
Query: 381 GVPQGSALSPLLFSLYIN----DIPRSPETHLALFADDTAIY 494
G P+GS +F ++IN +IP + ++D IY
Sbjct: 950 GAPRGSESRQFMFLVFINSLLCEIPINISCSACAISEDLEIY 991
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +3
Query: 204 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 383
+F D KAFD V H + L G + + ++++ N + + R VT G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 384 VPQGSALSPLLFSLYINDIPR 446
V QG +SP LFS + + R
Sbjct: 99 VRQGDPISPNLFSACLEHVFR 119
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1
Query: 439 ISLIYKLNSNGERAEPCGTPAVT*RGRER 353
ISL S GER +PCGTP G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical
protein R07G3.6 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 364 PVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGR 510
P T+ + +P + +S +P LRR +S P PP+TT R
Sbjct: 131 PTTTTTPAPTTTTTPNFLEKSLSMFFPSLRRKP-QSIPTLPPTTTPTPR 178
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 686 PRRSANHDVRPAHTVGPRRSIFRRHPRQ 769
P + AN R A VG + S+F+ H RQ
Sbjct: 65 PEKDANCKFRVAEIVGEKSSLFKAHSRQ 92
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 686 PRRSANHDVRPAHTVGPRRSIFRRHPRQ 769
P + AN R A VG + S+F+ H RQ
Sbjct: 65 PEKDANCKFRVAEIVGEKSSLFKAHSRQ 92
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 686 PRRSANHDVRPAHTVGPRRSIFRRHPRQ 769
P + AN R A VG + S+F+ H RQ
Sbjct: 65 PEKDANCKFRVAEIVGEKSSLFKAHSRQ 92
>U41557-1|AAA83300.1| 418|Caenorhabditis elegans Hypothetical
protein C50F7.6 protein.
Length = 418
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 262 NCITW-ECQTDSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYYSVCISTI 438
+C W D+ S+Y T + RS + + V P TS + ++ PSPR +
Sbjct: 44 SCSGWPNGAADTSSAYNTGGESCRSVSVTPDGVFIPTTSNSQMIQSQPSPRVLRRTVKMA 103
Query: 439 YPGLRR 456
P ++R
Sbjct: 104 SPAVQR 109
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 119 TLVRPSSAPPHGAHLTRAEQAETHSDRSPLLRYS 220
T RP+S+P H AE A H+++S + ++
Sbjct: 107 TAYRPASSPAPANHPVHAENAREHAEKSKVFTHN 140
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 119 TLVRPSSAPPHGAHLTRAEQAETHSDRSPLLRYS 220
T RP+S+P H AE A H+++S + ++
Sbjct: 226 TAYRPASSPAPANHPVHAENAREHAEKSKVFTHN 259
>U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical
protein T13C2.3a protein.
Length = 431
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 286 TDSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSP 408
T + +S TT T ++ + P T+ PE K PP P
Sbjct: 320 TSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLP 360
>U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical
protein T13C2.3b protein.
Length = 506
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 286 TDSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSP 408
T + +S TT T ++ + P T+ PE K PP P
Sbjct: 395 TSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLP 435
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,178,428
Number of Sequences: 27780
Number of extensions: 531866
Number of successful extensions: 1590
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1583
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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