Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_M19
(842 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 42 5e-04
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 39 0.004
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 39 0.004
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 39 0.004
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 39 0.005
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 38 0.009
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 37 0.016
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 37 0.016
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 37 0.016
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 37 0.021
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 36 0.027
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 36 0.048
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 36 0.048
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 35 0.063
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 34 0.11
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 34 0.11
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 34 0.15
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.25
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 33 0.25
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 33 0.25
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 33 0.34
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 33 0.34
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 33 0.34
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 33 0.34
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 33 0.34
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 33 0.34
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 32 0.44
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.44
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 32 0.44
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.59
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.59
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.59
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 31 0.78
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.78
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 31 0.78
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 31 0.78
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 0.78
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.0
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 30 1.8
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 30 1.8
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 30 2.4
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 30 2.4
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 30 2.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.4
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 2.4
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 30 2.4
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 30 2.4
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 30 2.4
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 30 2.4
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 30 2.4
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 30 2.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.4
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 25 3.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 3.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL023844-8|CAA19534.1| 396|Caenorhabditis elegans Hypothetical ... 29 3.1
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 29 4.1
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 29 4.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 4.1
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 29 4.1
Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical p... 29 5.5
Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical p... 29 5.5
Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical p... 29 5.5
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 29 5.5
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 29 5.5
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 5.5
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 29 5.5
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 29 5.5
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 7.2
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 28 7.2
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 7.2
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 7.2
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 28 7.2
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 9.5
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 9.5
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 28 9.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.5
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 28 9.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 9.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 9.5
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 9.5
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = +2
Query: 131 LSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANIRESESTVRILADLQMNWIDK 295
+S ++++LL Y++ P + V +L R ++ E + L+M W DK
Sbjct: 29 VSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
Query: 296 RLSXNAGEWGCSTWL-VSSERLWRPDVVL 379
+L+ N +WG ++ + S+++W PD+VL
Sbjct: 89 KLTWNPTDWGGVEYIHIPSDQIWIPDIVL 117
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 164 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWL- 340
YD E+P + L +L+ ++E + + ++ ++ W D RLS NA W +T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIY 122
Query: 341 VSSERLWRPDV 373
+ +++W P +
Sbjct: 123 MKQDKVWSPTI 133
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 140 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 XNAGEWG-CSTWLVSSERLWRPDVVL 379
+ +G + V E +W PD+VL
Sbjct: 90 WDPVNYGGVNVLYVPYEMIWVPDIVL 115
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 140 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 XNAGEWG-CSTWLVSSERLWRPDVVL 379
+ +G + V E +W PD+VL
Sbjct: 90 WDPVNYGGVNVLYVPYEMIWVPDIVL 115
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 140 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 XNAGEWG-CSTWLVSSERLWRPDVVL 379
+ +G + V E +W PD+VL
Sbjct: 90 WDPVNYGGVNVLYVPYEMIWVPDIVL 115
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/100 (19%), Positives = 43/100 (43%)
Frame = +2
Query: 101 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 280
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 281 NWIDKRLSXNAGEWGCSTWLVSSERLWRPDVVLLXAXATT 400
+W D +S + +WG S ++W P++V + +T+
Sbjct: 114 SWNDTMVSWDKEQWGLSWLNFYWIQIWTPNIVQINGGSTS 153
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWL-VSSERLWRPDVVL 379
++ E + + + L +W+D RLS N E+G T + E LW PD++L
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIIL 94
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = +2
Query: 143 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 301
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 302 SXNAGEWGCSTWLVS-SERLWRP 367
S NA ++ T + + E++W P
Sbjct: 110 SWNASDYKNVTAIFTRQEKIWSP 132
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSXNAGEWG-CSTWLVSSERLWRPDVVL 379
N+ E ++ L M W D +L+ N E+G S V S+R+W PD+VL
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVL 149
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSXNAGEWG-CSTWLVSSERLWRPDVVL 379
N+ E ++ L M W D +L+ N E+G S V S+R+W PD+VL
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVL 149
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 272 LQMNWIDKRLSXNAGEWG-CSTWLVSSERLWRPDVVLL 382
L +NW+D RLS N W + R+W+PD++L+
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILV 202
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 179 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWLVSSER 355
PP +++ + + + L+ ++ E E V L D W D+RL N E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 356 LWRPDVVLLXA 388
+W P+V + A
Sbjct: 110 IWLPEVTIADA 120
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 35.5 bits (78), Expect = 0.048
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 140 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 305 XNAGEWG-CSTWLVSSERLWRPDVVL 379
+ E+G V S+ +W PDVVL
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVL 115
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 35.5 bits (78), Expect = 0.048
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 140 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 305 XNAGEWG-CSTWLVSSERLWRPDVVL 379
+ E+G V S+ +W PDVVL
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVL 115
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 35.1 bits (77), Expect = 0.063
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 206 LTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWLVSSERLWRP 367
L +L+ ++E E V ++ +L W D RLS N+ + T V E++W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 272 LQMNWIDKRLSXNAGEWGCSTWL-VSSERLWRPDVVL 379
L+M W D RL + G WG L V +++W PD++L
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILL 113
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 34.3 bits (75), Expect = 0.11
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = +2
Query: 86 TCAIASAAECE-NATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVR 259
T ++ A CE N+ ++ LL YD+ P + V +++ L +I SE +
Sbjct: 20 TESLVDPAHCEYNSNHRKSILTDLLQDYDKTMVPSNNSV-QVSVELTVQDISSISEISSS 78
Query: 260 ILADLQMN--WIDKRLSXNAGEWGCSTWLVS--SERLWRPDVVLLXAXAT 397
+AD+ + W D RL + L S SERLW P+V + + +T
Sbjct: 79 FIADVWFSQVWYDPRLEYRNISCKTNLSLDSYVSERLWTPNVCFVNSKST 128
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 179 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWL-VSSER 355
PP +I + L++ ++ + E E L D + +W D RLS + ++G + V +
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHIYVPRSK 137
Query: 356 LWRPDVVLL 382
+W P+ ++
Sbjct: 138 VWIPETTIV 146
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADL 274
E + T + D L+ YD P + +++N++++ + +E T+ ++
Sbjct: 21 EVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDPAEETINFSSEF 80
Query: 275 QMNWIDKRLSXNAGEWGCSTWLVSSER-LWRPDVVL 379
+ W D+ L N ++ TWL E LW PD +
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTV 115
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +3
Query: 537 GXAGXFRGGXXEXPGXAXXPXAXXTXPX-PXARASXXXXXXXAGGGGGXSXXGGGGXVXX 713
G AG GG P A P P P +S + GGGG S GGG
Sbjct: 285 GYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASS 344
Query: 714 RXGXG 728
G G
Sbjct: 345 SSGGG 349
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +3
Query: 537 GXAGXFRGGXXEXPGXAXXPXAXXTXPX-PXARASXXXXXXXAGGGGGXSXXGGGGXVXX 713
G AG GG P A P P P +S + GGGG S GGG
Sbjct: 285 GYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASS 344
Query: 714 RXGXG 728
G G
Sbjct: 345 SSGGG 349
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 200 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWLVSSERLWRPDVV 376
VN+ L + H + E E T + + WID+ + +A + + +S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 377 L 379
L
Sbjct: 114 L 114
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +3
Query: 666 GGGGXSXXGGGGXVXXRXGXGXRXXXWXXRAPGPPSXXXGGXC 794
GGGG GGGG G G AP PP GG C
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGC 122
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +3
Query: 666 GGGGXSXXGGGGXVXXRXGXGXRXXXWXXRAPGPPSXXXGGXC 794
GGGG G GG G G AP PP GG C
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGC 65
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 272 LQMNWIDKRLSXNAGEWGCSTW-LVSSERLWRPDV 373
L+++W D+RL N EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 272 LQMNWIDKRLSXNAGEWGCSTW-LVSSERLWRPDV 373
L+++W D+RL N EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 173 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWL-VSS 349
E P KI + L L + N+ E E + L M W D +L + ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 350 ERLWRPDVVL 379
E++W PD+VL
Sbjct: 118 EKVWLPDIVL 127
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 173 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWL-VSS 349
E P KI + L L + N+ E E + L M W D +L + ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 350 ERLWRPDVVL 379
E++W PD+VL
Sbjct: 118 EKVWLPDIVL 127
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 173 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWL-VSS 349
E P KI + L L + N+ E E + L M W D +L + ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 350 ERLWRPDVVL 379
E++W PD+VL
Sbjct: 118 EKVWLPDIVL 127
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 32.7 bits (71), Expect = 0.34
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +2
Query: 140 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNWIDKRL 301
+I L Y +E P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 302 SXNAGEWGCSTWL-VSSERLWRPDVVL 379
+ N ++G L V SE +W+PD+++
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLV 113
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 32.7 bits (71), Expect = 0.34
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +2
Query: 140 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNWIDKRL 301
+I L Y +E P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 302 SXNAGEWGCSTWL-VSSERLWRPDVVL 379
+ N ++G L V SE +W+PD+++
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLV 113
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 32.7 bits (71), Expect = 0.34
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +2
Query: 140 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNWIDKRL 301
+I L Y +E P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 11 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 70
Query: 302 SXNAGEWGCSTWL-VSSERLWRPDVVL 379
+ N ++G L V SE +W+PD+++
Sbjct: 71 TWNPSDFGNIKSLHVPSEMIWKPDLLV 97
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 206 LTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWLVSSERLWRP 367
L +L+ ++E V ++ +L W D RLS N + ST E++W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 200 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWLVSSERLWRPDVV 376
V + L++ H + E E T + L +W D+ L ST ++S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 377 L 379
L
Sbjct: 114 L 114
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Frame = +2
Query: 152 LLATYDRESPPD--SKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLSXNAG 316
LL Y+ E P SK +N+T I + + +IL ++++W+D +L +
Sbjct: 7 LLYDYNNEVRPSVHSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPR 66
Query: 317 EWGCSTWL-VSSERLWRPDVVL 379
+ T + + S+++W+PD++L
Sbjct: 67 LYQNVTRIHIPSDKIWKPDIIL 88
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.59
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 766 GPGARXXXXXXRXPXPXRXXTXPPPPXXXXPPPPPA 659
G G+ P P R + PPPP PPPPPA
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTG-SPPPPPA 285
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPP 662
P P PPPP PPPPP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPP 301
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 726 RAPPXXXPXPPPPXRXXPP 670
+APP P PPPP + PP
Sbjct: 230 QAPPAGSPPPPPPPKGSPP 248
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPPA 659
P P + PPPP PPPP A
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRA 294
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 5/47 (10%)
Frame = -2
Query: 787 PPXXXXGGP-----GARXXXXXXRXPXPXRXXTXPPPPXXXXPPPPP 662
PP G P G+ P P + PPP PPPPP
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.59
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 766 GPGARXXXXXXRXPXPXRXXTXPPPPXXXXPPPPPA 659
G G+ P P R + PPPP PPPPPA
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTG-SPPPPPA 306
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPP 662
P P PPPP PPPPP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPP 322
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 726 RAPPXXXPXPPPPXRXXPP 670
+APP P PPPP + PP
Sbjct: 251 QAPPAGSPPPPPPPKGSPP 269
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPPA 659
P P + PPPP PPPP A
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRA 315
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 5/47 (10%)
Frame = -2
Query: 787 PPXXXXGGP-----GARXXXXXXRXPXPXRXXTXPPPPXXXXPPPPP 662
PP G P G+ P P + PPP PPPPP
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.59
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 766 GPGARXXXXXXRXPXPXRXXTXPPPPXXXXPPPPPA 659
G G+ P P R + PPPP PPPPPA
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTG-SPPPPPA 291
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPP 662
P P PPPP PPPPP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPP 307
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 726 RAPPXXXPXPPPPXRXXPP 670
+APP P PPPP + PP
Sbjct: 236 QAPPAGSPPPPPPPKGSPP 254
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPPA 659
P P + PPPP PPPP A
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRA 300
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 5/47 (10%)
Frame = -2
Query: 787 PPXXXXGGP-----GARXXXXXXRXPXPXRXXTXPPPPXXXXPPPPP 662
PP G P G+ P P + PPP PPPPP
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 31.5 bits (68), Expect = 0.78
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLH-LRHANIRESESTVRILADL 274
E + T + D L+ YD P + +N++++ + + +E T+ +
Sbjct: 21 EIDGITVSEQLKDVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEF 80
Query: 275 QMNWIDKRLSXNAGEWGCSTWLVSSER-LWRPDVVL 379
+ W D+ L N ++ TWL E LW PD +
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTV 115
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = -2
Query: 787 PPXXXXGG--PGARXXXXXXRXPXPXRXXTXPPPPXXXXPPPPP 662
PP GG P P P PPPP PPPPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.78
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQ 277
C+ + + + + LL Y+ P + V + L L+ ++ E V + A L
Sbjct: 20 CDGSVAETKLFTDLLKGYNPLERPVQNSSQPLEVKIKLFLQQILDVDEKNQIVSVNAWLS 79
Query: 278 MNWIDKRLSXNAGEWGCSTWLV---SSERLWRPDVVLLXAXA 394
W D +L ++G + SS+ +W+PDV+L + A
Sbjct: 80 YTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLLYNSAA 121
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 31.5 bits (68), Expect = 0.78
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 663 GGGGGXSXXGGGGXVXXRXGXGXRXXXWXXRAPGPPS 773
GGGGG GGGG G + AP PPS
Sbjct: 482 GGGGGGGFGGGGGGFGGGGGGFGSGSPFGGAAPSPPS 518
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.5 bits (68), Expect = 0.78
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPP 662
P P + PPPP PPPPP
Sbjct: 125 PAPYQQQPPPPPPPPHYPPPPP 146
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -1
Query: 797 PAXPAAPXGXWTXXXXXPXXRSPXXPXPXXDXAPPPRXGXXPPXA 663
PA P AP P + P P P PPP PP A
Sbjct: 110 PAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPA 154
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPPA 659
P P PPP PPPPPA
Sbjct: 132 PPPPPPPPHYPPPPPHYPPPPPA 154
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/66 (22%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +2
Query: 194 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWL---VSSERLW 361
+VV++ ++L+ ++ E + ++A ++ W D +L + E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 362 RPDVVL 379
+PDV+L
Sbjct: 113 KPDVLL 118
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = -1
Query: 809 PGXXPAXPAAPX-GXWTXXXXXPXXRSPXXPXPXXDXAPPPRXGXXPP 669
PG P P P G W P R+P P PPP PP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = -1
Query: 809 PGXXPAXPAAPX-GXWTXXXXXPXXRSPXXPXPXXDXAPPPRXGXXPP 669
PG P P P G W P R+P P PPP PP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 338
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 30.3 bits (65), Expect = 1.8
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMN- 283
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 284 -WIDKRLSXNAGEWGCSTWL---VSS--ERLWRPDVVLLXAXATT 400
W D RLS C+T + VS +++W PD ++ + +++
Sbjct: 68 IWQDPRLSFKHLN-VCATNITLKVSDFRKKIWTPDTCIINSKSSS 111
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 212 LHLRHAN-IRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWLVSSERLWR 364
LH+ H + I++ + +++ W+D+RL N + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPPAXXXXXXXDARAXGXG 614
P P R + PPPP PPPPP AR+ G
Sbjct: 241 PEPPREKSVPPPP---PPPPPPKPVSREPSRARSMTPG 275
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPPAXXXXXXXDARAXGXG 614
P P R + PPPP PPPPP AR+ G
Sbjct: 256 PEPPREKSVPPPP---PPPPPPKPVSREPSRARSMTPG 290
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPP 662
P P PPPP PPPPP
Sbjct: 777 PPPFFALPVPPPPPVPPPPPPP 798
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 194 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWL-VSSERLWRP 367
++V + L L N+ E + + L + W D ++ N +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 368 DVVL 379
D+VL
Sbjct: 116 DIVL 119
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +2
Query: 116 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWI 289
E+A L+ L I +A+ + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 290 DKRLSXNAGEWGCSTWLVSS-ERLWRP 367
D RL N W + +V S +W P
Sbjct: 93 DDRLMWNQDTWKKNKLVVHSFHHIWVP 119
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 218 LRHANIRESESTVRILADLQMNWIDKRLSXNAGEWG-CSTWLVSSERLWRPDVVL 379
+R ++ E + L+M W D +L+ ++G T + S+ +W PD+VL
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVL 126
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 194 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWL-VSSERLWRP 367
++V + L L N+ E + + L + W D ++ N +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 368 DVVL 379
D+VL
Sbjct: 116 DIVL 119
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 194 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWL-VSSERLWRP 367
++V + L L N+ E + + L + W D ++ N +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 368 DVVL 379
D+VL
Sbjct: 116 DIVL 119
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPP 662
P P PPPP PPPPP
Sbjct: 58 PPPMCPPPPPPPPPPMCPPPPP 79
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 57 PPPPMCPPPPPPP 69
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 68 PPPPPMCPPPPPP 80
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPP 662
P P PPPP PPPPP
Sbjct: 57 PPPCPAQFCPPPPICPPPPPPP 78
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPP 662
P P PPPP PPPPP
Sbjct: 66 PPPPICPPPPPPPMPCPPPPPP 87
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 720 PPXXXPXPPPPXRXXPPXRXPXXR 649
PP P PPPP PP P R
Sbjct: 67 PPPICPPPPPPPMPCPPPPPPMPR 90
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 197 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWLVSSERLWR 364
V+N+T+ + N + E ++IL +W D L+ + EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 365 PD 370
PD
Sbjct: 120 PD 121
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 197 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWLVSSERLWR 364
V+N+T+ + N + E ++IL +W D L+ + EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 365 PD 370
PD
Sbjct: 120 PD 121
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPPAXXXXXXXDARAXGXG 614
P P R + PPPP PPPPP AR+ G
Sbjct: 241 PEPPREKSVPPPP---PPPPPPKPVSREPSRARSMTPG 275
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPPAXXXXXXXDARAXGXG 614
P P R + PPPP PPPPP AR+ G
Sbjct: 256 PEPPREKSVPPPP---PPPPPPKPVSREPSRARSMTPG 290
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 218 LRHANIRESESTVRILADLQMNWIDKRLSXNAGEWG-CSTWLVSSERLWRPDVVL 379
+R ++ E + L+M W D +L+ ++G T + S+ +W PD+VL
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVL 126
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 727 PXPXRXXTXPPPPXXXXPPPPP 662
P P R PP P PPPPP
Sbjct: 126 PNPPRTCCPPPTPAAPPPPPPP 147
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +3
Query: 660 AGGGGGXSXXGGGGXVXXRXGXGXRXXXWXXRAP-GPP 770
AGGGGG + GGGG G G P GPP
Sbjct: 102 AGGGGGYAAGGGGGGGGGGGGGGCHCAAQASGCPAGPP 139
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +3
Query: 663 GGGGGXSXXGGGGXVXXRXGXGXRXXXWXXRAPGPPSXXXGG 788
GGGGG + GGG G + AP P + GG
Sbjct: 365 GGGGGGAAAGGGYNAGGGGGGAPQAAPAPQAAPAPAAPAGGG 406
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 630 RASXXXXXXXAGGGGGXSXXGGGGXVXXRXGXGXRXXXWXXRAP 761
RA AGG GG S GGGG G G AP
Sbjct: 344 RADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNAGGGGGGAP 387
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 24.6 bits (51), Expect(2) = 8.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPP
Sbjct: 65 PPPPKGTGTPPPP 77
Score = 24.6 bits (51), Expect(2) = 8.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPP
Sbjct: 97 PPPPKGTGTPPPP 109
Score = 24.6 bits (51), Expect(2) = 3.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPP PPPPP
Sbjct: 129 PPPKGTGSPPPPP 141
Score = 24.6 bits (51), Expect(2) = 8.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPP
Sbjct: 159 PPPPKGTGSPPPP 171
Score = 24.6 bits (51), Expect(2) = 8.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPP PPPPP
Sbjct: 191 PPPKGTGTPPPPP 203
Score = 24.6 bits (51), Expect(2) = 8.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPP
Sbjct: 283 PPPPKGTGTPPPP 295
Score = 23.4 bits (48), Expect(2) = 3.0
Identities = 13/41 (31%), Positives = 14/41 (34%), Gaps = 3/41 (7%)
Frame = -2
Query: 787 PPXXXXGGP---GARXXXXXXRXPXPXRXXTXPPPPXXXXP 674
PP G P A R P P + PPPP P
Sbjct: 74 PPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEP 114
Score = 21.8 bits (44), Expect(2) = 8.5
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -2
Query: 733 RXPXPXRXXTXPPPPXXXXP 674
R P P + PPPP P
Sbjct: 32 RPPPPPKGTGTPPPPPTGEP 51
Score = 21.8 bits (44), Expect(2) = 8.5
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -2
Query: 733 RXPXPXRXXTXPPPPXXXXP 674
R P P + PPPP P
Sbjct: 63 RPPPPPKGTGTPPPPPTGEP 82
Score = 21.8 bits (44), Expect(2) = 8.5
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -2
Query: 733 RXPXPXRXXTXPPPPXXXXP 674
R P P + PPPP P
Sbjct: 126 RPPPPPKGTGSPPPPPTGEP 145
Score = 21.8 bits (44), Expect(2) = 8.5
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -2
Query: 733 RXPXPXRXXTXPPPPXXXXP 674
R P P + PPPP P
Sbjct: 157 RPPPPPKGTGSPPPPPTGEP 176
Score = 21.8 bits (44), Expect(2) = 8.5
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -2
Query: 733 RXPXPXRXXTXPPPPXXXXP 674
R P P + PPPP P
Sbjct: 250 RPPPPPKGTGSPPPPPTGEP 269
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 700 PPPPXXXXPPPPPA 659
PPPP PPPPPA
Sbjct: 5 PPPPPPPPPPPPPA 18
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 2 PPPPPPPPPPPPP 14
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 3 PPPPPPPPPPPPP 15
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 4 PPPPPPPPPPPPP 16
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 700 PPPPXXXXPPPPPA 659
PPPP PPPPPA
Sbjct: 5 PPPPPPPPPPPPPA 18
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 2 PPPPPPPPPPPPP 14
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 3 PPPPPPPPPPPPP 15
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 4 PPPPPPPPPPPPP 16
>AL023844-8|CAA19534.1| 396|Caenorhabditis elegans Hypothetical
protein Y48A6B.13 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 706 TXPPPPXXXXPPPPP 662
T PPPP PPPPP
Sbjct: 312 TSPPPPTQKAPPPPP 326
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +2
Query: 164 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWL 340
YD ++P + L L+ + E V ++ ++ W D RLS NA + T+
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFY 122
Query: 341 VSSERLWRP 367
+W P
Sbjct: 123 TRQSNVWSP 131
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 146 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEW- 322
+SL+ S P ++ +L L N+ E ++ M W D ++ + E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 323 GCSTWLVSSERLWRPDVVL 379
G T V +++W PD+VL
Sbjct: 97 GIKTIRVPPDKVWLPDIVL 115
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = -2
Query: 733 RXPXPXRXXTXPP-PPXXXXPPPPPA 659
R P P PP PP PPPPPA
Sbjct: 808 RPPYPYPGGPVPPGPPQNRMPPPPPA 833
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 146 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEW- 322
+SL+ S P ++ +L L N+ E ++ M W D ++ + E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 323 GCSTWLVSSERLWRPDVVL 379
G T V +++W PD+VL
Sbjct: 97 GIKTIRVPPDKVWLPDIVL 115
>Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical
protein Y57G11C.24e protein.
Length = 665
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 715 RXXTXPPPPXXXXPPPPP 662
R PPPP PPPPP
Sbjct: 463 REHVAPPPPPVVIPPPPP 480
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 469 PPPPVVIPPPPPP 481
>Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical
protein Y57G11C.24d protein.
Length = 845
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 715 RXXTXPPPPXXXXPPPPP 662
R PPPP PPPPP
Sbjct: 643 REHVAPPPPPVVIPPPPP 660
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 649 PPPPVVIPPPPPP 661
>Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical
protein Y57G11C.24a protein.
Length = 862
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 715 RXXTXPPPPXXXXPPPPP 662
R PPPP PPPPP
Sbjct: 660 REHVAPPPPPVVIPPPPP 677
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 666 PPPPVVIPPPPPP 678
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 715 RXXTXPPPPXXXXPPPPP 662
R PPPP PPPPP
Sbjct: 715 REHVAPPPPPVVIPPPPP 732
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 721 PPPPVVIPPPPPP 733
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSXNAGEWG------CSTWLVSSERLWRPDVVLLXAX 391
++ E + ILA + +W D +L+ + +G S +S +LWRPDV+L +
Sbjct: 59 DVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNSV 118
Query: 392 ATT-GGDYALXXRVSNNG 442
+ + Y+ VS+NG
Sbjct: 119 SESFDSTYSSRFIVSSNG 136
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 769 GGPGARXXXXXXRXPXPXRXXTXPPPPXXXXPPPPP 662
GG G P P PPPP PPPPP
Sbjct: 28 GGGGCAPAAPACAPPPPPMCGCAPPPPP---PPPPP 60
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 715 RXXTXPPPPXXXXPPPPP 662
R PPPP PPPPP
Sbjct: 715 REHVAPPPPPVVIPPPPP 732
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 721 PPPPVVIPPPPPP 733
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 272 LQMNWIDKRLSXNAGEWGCSTWLVSSERLWRPDV 373
L M W D+RL+ N T + ++R+W PD+
Sbjct: 175 LAMGWFDRRLAHNCTHPILVTSKLIADRIWYPDL 208
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 721 PXRXXTXPPPPXXXXPPPPP 662
P PPPP PPPPP
Sbjct: 128 PQYIEAPPPPPSPPPPPPPP 147
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -2
Query: 787 PPXXXXGGPGARXXXXXXRXPXPXRXXTXPPPPXXXXPPPP 665
PP GP A P R PPPP PPP
Sbjct: 1293 PPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPP 1333
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 787 PPXXXXGGPGARXXXXXXRXPXPXRXXTXPPPPXXXXPPPPP 662
PP GP P P PPPP PPPPP
Sbjct: 270 PPPHHPYGPPHPMHHPYAMMPPPFGFF--PPPPRGHFPPPPP 309
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 787 PPXXXXGGPGARXXXXXXRXPXPXRXXTXPPPPXXXXPPPPP 662
PP GP P P PPPP PPPPP
Sbjct: 270 PPPHHPYGPPHPMHHPYAMMPPPFGFF--PPPPRGHFPPPPP 309
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -2
Query: 787 PPXXXXGGPGARXXXXXXRXPXPXRXXTXPPPPXXXXPPPP 665
PP GP A P R PPPP PPP
Sbjct: 1293 PPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPP 1333
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 357 PPPPPPPPPPPPP 369
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 358 PPPPPPPPPPPPP 370
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 660 AGGGGGXSXXGGGGXVXXRXGXGXRXXXWXXRAPGPP 770
AGGGGG GGGG G PGPP
Sbjct: 87 AGGGGGYGAGGGGGGGGGEAAGGGGGCTGCCN-PGPP 122
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/84 (25%), Positives = 24/84 (28%), Gaps = 1/84 (1%)
Frame = -2
Query: 784 PXXXXGGPGARXXXXXXRXPXPXRXXTXPPPPXXXXPPPPPAXXXXXXXDARAXGXG-XV 608
P G PG P P P P PP P + G G
Sbjct: 166 PAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQDG 225
Query: 607 XWAXGXXAXPGXSXXPPRKXPAXP 536
+ G A PG + P PA P
Sbjct: 226 ASSAGGEAGPGPAGPPGPAGPAGP 249
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 791 PPPPLGIIPPPPP 803
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 142 PPPPTGQYPPPPP 154
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 761 PPPPPGGCPPPPP 773
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 762 PPPPGGCPPPPPP 774
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 761 PPPPPGGCPPPPP 773
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 762 PPPPGGCPPPPPP 774
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 784 PPPPRASEPPPPP 796
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 90 PPPPTLKAPPPPP 102
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 344 PPPPPGGCPPPPP 356
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 345 PPPPGGCPPPPPP 357
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 581 PPPPMLGGPPPPP 593
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 700 PPPPXXXXPPPPP 662
PPPP PPPPP
Sbjct: 791 PPPPLGIIPPPPP 803
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,734,970
Number of Sequences: 27780
Number of extensions: 288994
Number of successful extensions: 3153
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2235
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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