Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_M19
(842 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 42 5e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 40 2e-05
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 38 1e-04
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 38 1e-04
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 38 1e-04
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 36 4e-04
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 36 6e-04
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 36 6e-04
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 36 6e-04
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 36 6e-04
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 36 6e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 36 6e-04
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 35 0.001
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 34 0.001
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 34 0.001
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 31 0.010
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 30 0.023
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 30 0.031
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 28 0.12
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 27 0.29
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.1
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 42.3 bits (95), Expect = 5e-06
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Frame = +2
Query: 95 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 253
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 254 VRILADLQMNWIDKRLSXNAGEWGCSTWL-VSSERLWRPDVVL 379
+ L+ W D + + E+G T L V SE +W PD+VL
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVL 109
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 40.3 bits (90), Expect = 2e-05
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 286
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLSXNAGEWGCSTWLVSSERLWRPD 370
+D+RL+ G+ + + R+W+PD
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPD 89
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 37.9 bits (84), Expect = 1e-04
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 305 XNAGEW-GCSTWLVSSERLWRPDVVLL-XAXATTGGDYALXXRVSNNGS 445
N E+ G ++ +LW+PD+++ A G Y V++NGS
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 37.9 bits (84), Expect = 1e-04
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 305 XNAGEW-GCSTWLVSSERLWRPDVVLL-XAXATTGGDYALXXRVSNNGS 445
N E+ G ++ +LW+PD+++ A G Y V++NGS
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 37.9 bits (84), Expect = 1e-04
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 244
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 245 ESTVRILADLQMNWIDKRLSXNAGEWG-CSTWLVSSERLWRPDVVL 379
T + ++ W D +L N ++G T V SE +W PD+VL
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVL 109
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 37.5 bits (83), Expect = 2e-04
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWLVSSERLWRPDVVLL-XAXATTG 403
++ E + A L++ W+D L N E+ G ++ +LW+PD+++ A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALXXRVSNNGS 445
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 36.3 bits (80), Expect = 4e-04
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 271
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 272 LQMNWIDKRLSXNAGEWGCSTWL-VSSERLWRPDVVL 379
++ +W D +L + E+G L V S+ +WRPD+VL
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVL 113
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 35.5 bits (78), Expect = 6e-04
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWLVSSERLWRPDVVLL-XAXATTG 403
++ E + A L++ W+D L N E+ G ++ +LW+PD+++ A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALXXRVSNNGS 445
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 35.5 bits (78), Expect = 6e-04
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWLVSSERLWRPDVVLL-XAXATTG 403
++ E + A L++ W+D L N E+ G ++ +LW+PD+++ A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALXXRVSNNGS 445
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 35.5 bits (78), Expect = 6e-04
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWLVSSERLWRPDVVLL-XAXATTG 403
++ E + A L++ W+D L N E+ G ++ +LW+PD+++ A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALXXRVSNNGS 445
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 35.5 bits (78), Expect = 6e-04
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWLVSSERLWRPDVVLL-XAXATTG 403
++ E + A L++ W+D L N E+ G ++ +LW+PD+++ A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALXXRVSNNGS 445
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 35.5 bits (78), Expect = 6e-04
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWLVSSERLWRPDVVLL-XAXATTG 403
++ E + A L++ W+D L N E+ G ++ +LW+PD+++ A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALXXRVSNNGS 445
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 35.5 bits (78), Expect = 6e-04
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +2
Query: 140 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 304
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 305 XNAGEWGCSTWL-VSSERLWRPDVVL 379
N E+G L V SE +W PD+VL
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVL 122
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 34.7 bits (76), Expect = 0.001
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Frame = +2
Query: 92 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 256
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 257 RILADLQMNWIDKRLSXNAGEWGCSTWL-VSSERLWRPDVVLL-XAXATTGGDYALXXRV 430
L++ W D + N ++G L + RLW+PDV++ A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 431 SNNGS 445
NNG+
Sbjct: 131 KNNGT 135
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 34.3 bits (75), Expect = 0.001
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +2
Query: 140 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 XNAGEWGCSTWL-VSSERLWRPDVVL 379
E+G L V S+ +WRPD+VL
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVL 117
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 34.3 bits (75), Expect = 0.001
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +2
Query: 140 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 XNAGEWGCSTWL-VSSERLWRPDVVL 379
E+G L V S+ +WRPD+VL
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVL 117
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.010
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 194 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEW-GCSTWLVSSERLWRPD 370
+V L+LH ++ E + + W D L NA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 371 VVL 379
+L
Sbjct: 92 TIL 94
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 30.3 bits (65), Expect = 0.023
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSXNAGEWG-CSTWLVSSERLWR 364
K+ VN L ++ N+ E ++ L+ W D +L + ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 365 PDVVL 379
PD+VL
Sbjct: 111 PDIVL 115
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 29.9 bits (64), Expect = 0.031
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 128 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 292
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 293 KRLSXNAGEWGCSTWLVSSERLWRPD 370
RLS S + ER+WRPD
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPD 121
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.9 bits (59), Expect = 0.12
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 286
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 287 IDKRLSXNAGEWGCSTWLVSSE---RLWRPD 370
D RL+ G T V SE +W PD
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPD 97
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 26.6 bits (56), Expect = 0.29
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 286
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 287 IDKRLSXNAGEWGCSTWLVSSE---RLWRPD 370
D RL+ G T V SE +W PD
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPD 97
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3
Query: 720 PPXXXPXPPPPXRXXP 673
PP P PPPP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 694 PPXXXXPPPPPA 659
PP PPPPP+
Sbjct: 338 PPKPAPPPPPPS 349
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 337 PSAAAPFPCVPTQS 296
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,200
Number of Sequences: 438
Number of extensions: 4554
Number of successful extensions: 33
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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