Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_M17
(835 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 32 2.2
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.9
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.9
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.9
BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type c... 31 3.9
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.9
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.9
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.9
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.9
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.9
AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens ... 31 3.9
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 31 5.1
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 31 5.1
AK223275-1|BAD96995.1| 1181|Homo sapiens AT rich interactive dom... 31 5.1
AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remod... 31 5.1
AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein... 31 5.1
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 31 5.1
AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling f... 31 5.1
AB210022-1|BAE06104.1| 1374|Homo sapiens ARID1A variant protein ... 31 5.1
BC064643-1|AAH64643.1| 436|Homo sapiens ROBO4 protein protein. 31 6.8
AK074940-1|BAC11306.1| 754|Homo sapiens protein ( Homo sapiens ... 30 9.0
AF239798-1|AAF63496.1| 619|Homo sapiens protein kinase MEKK2b p... 30 9.0
AF111105-1|AAD28547.1| 618|Homo sapiens mitogen-activated prote... 30 9.0
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 464 SQCAGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 604
S C G PF S+ S P++S HP + +H Q P + QPPQ
Sbjct: 85 SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type
containing 10 protein.
Length = 434
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 563 PDHQIPDSIHQPPQNLTSISINPLNAVLKRSSRRGLKPPLSSXAPSA 703
P + P + PP + I PL+A L ++ +G+ PP S AP A
Sbjct: 342 PTNAAPPAAPPPPPPHLTPEITPLSAALAQTIAQGMAPPPVSMAPVA 388
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ14451 fis, clone HEMBB1001834. ).
Length = 434
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 563 PDHQIPDSIHQPPQNLTSISINPLNAVLKRSSRRGLKPPLSSXAPSA 703
P + P + PP + I PL+A L ++ +G+ PP S AP A
Sbjct: 342 PTNAAPPAAPPPPPPHLTPEITPLSAALAQTIAQGMAPPPVSMAPVA 388
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 SRPYASSH-PPLRSRLHQPDHQIPDSIHQPPQNLTSISINPLNAVLKRSSRRGLKPPLSS 688
+RP S++ PP + H P P + +P +N TS S +P + + G P S
Sbjct: 1565 TRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASH 1624
Query: 689 XAPSAYLXPLV 721
AP+ P++
Sbjct: 1625 IAPAPVQPPMI 1635
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 SRPYASSH-PPLRSRLHQPDHQIPDSIHQPPQNLTSISINPLNAVLKRSSRRGLKPPLSS 688
+RP S++ PP + H P P + +P +N TS S +P + + G P S
Sbjct: 1565 TRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASH 1624
Query: 689 XAPSAYLXPLV 721
AP+ P++
Sbjct: 1625 IAPAPVQPPMI 1635
>AK223275-1|BAD96995.1| 1181|Homo sapiens AT rich interactive domain
1A (SWI- like) isoform a variant protein.
Length = 1181
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 SRPYASSH-PPLRSRLHQPDHQIPDSIHQPPQNLTSISINPLNAVLKRSSRRGLKPPLSS 688
+RP S++ PP + H P P + +P +N TS S +P + + G P S
Sbjct: 461 TRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASH 520
Query: 689 XAPSAYLXPLV 721
AP+ P++
Sbjct: 521 IAPAPVQPPMI 531
>AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA1 protein.
Length = 1999
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 SRPYASSH-PPLRSRLHQPDHQIPDSIHQPPQNLTSISINPLNAVLKRSSRRGLKPPLSS 688
+RP S++ PP + H P P + +P +N TS S +P + + G P S
Sbjct: 1279 TRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASH 1338
Query: 689 XAPSAYLXPLV 721
AP+ P++
Sbjct: 1339 IAPAPVQPPMI 1349
>AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein p270
protein.
Length = 1927
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 SRPYASSH-PPLRSRLHQPDHQIPDSIHQPPQNLTSISINPLNAVLKRSSRRGLKPPLSS 688
+RP S++ PP + H P P + +P +N TS S +P + + G P S
Sbjct: 1207 TRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASH 1266
Query: 689 XAPSAYLXPLV 721
AP+ P++
Sbjct: 1267 IAPAPVQPPMI 1277
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor 250a
protein.
Length = 2285
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 SRPYASSH-PPLRSRLHQPDHQIPDSIHQPPQNLTSISINPLNAVLKRSSRRGLKPPLSS 688
+RP S++ PP + H P P + +P +N TS S +P + + G P S
Sbjct: 1565 TRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASH 1624
Query: 689 XAPSAYLXPLV 721
AP+ P++
Sbjct: 1625 IAPAPVQPPMI 1635
>AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling factor
p250 protein.
Length = 1939
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 SRPYASSH-PPLRSRLHQPDHQIPDSIHQPPQNLTSISINPLNAVLKRSSRRGLKPPLSS 688
+RP S++ PP + H P P + +P +N TS S +P + + G P S
Sbjct: 1219 TRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASH 1278
Query: 689 XAPSAYLXPLV 721
AP+ P++
Sbjct: 1279 IAPAPVQPPMI 1289
>AB210022-1|BAE06104.1| 1374|Homo sapiens ARID1A variant protein
protein.
Length = 1374
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 SRPYASSH-PPLRSRLHQPDHQIPDSIHQPPQNLTSISINPLNAVLKRSSRRGLKPPLSS 688
+RP S++ PP + H P P + +P +N TS S +P + + G P S
Sbjct: 1218 TRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASH 1277
Query: 689 XAPSAYLXPLV 721
AP+ P++
Sbjct: 1278 IAPAPVQPPMI 1288
>BC064643-1|AAH64643.1| 436|Homo sapiens ROBO4 protein protein.
Length = 436
Score = 30.7 bits (66), Expect = 6.8
Identities = 25/75 (33%), Positives = 33/75 (44%)
Frame = +2
Query: 476 GHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQNLTSISINPLNAVLKRS 655
GH SH WR +P P + Q+P PPQ L +S +P ++
Sbjct: 1 GHRAESSHGLWRRQPPGGQGFPASAA----PAQVPAVRRLPPQ-LAQLS-SPCSSSDSLC 54
Query: 656 SRRGLKPPLSSXAPS 700
SRRGL P S AP+
Sbjct: 55 SRRGLSSPRLSLAPA 69
>AK074940-1|BAC11306.1| 754|Homo sapiens protein ( Homo sapiens
cDNA FLJ90459 fis, clone NT2RP3001754. ).
Length = 754
Score = 30.3 bits (65), Expect = 9.0
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 SRPYASSH-PPLRSRLHQPDHQIPDSIHQPPQNLTSISINPLNAVLKRSSRRGLKPPLSS 688
+RP S++ PP + H P P + +P +N TS S +P + + G P S
Sbjct: 34 TRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGIKMQKAGPPVPASH 93
Query: 689 XAPSAYLXPLV 721
AP+ P++
Sbjct: 94 IAPAPVQPPMI 104
>AF239798-1|AAF63496.1| 619|Homo sapiens protein kinase MEKK2b
protein.
Length = 619
Score = 30.3 bits (65), Expect = 9.0
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 536 PPLRSRLHQPDHQIPDSIHQPPQNLTSISINPLNAVLKRSSRRGLKPPLSSXAP 697
P R R P IPD +HQ +N + SIN + S + L PLS +P
Sbjct: 157 PTSRDRSSPPPGYIPDELHQVARNGSFTSINSEGEFIPESMEQML-DPLSLSSP 209
>AF111105-1|AAD28547.1| 618|Homo sapiens mitogen-activated protein
kinase kinase kinase MEKK2 protein.
Length = 618
Score = 30.3 bits (65), Expect = 9.0
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 536 PPLRSRLHQPDHQIPDSIHQPPQNLTSISINPLNAVLKRSSRRGLKPPLSSXAP 697
P R R P IPD +HQ +N + SIN + S + L PLS +P
Sbjct: 157 PTSRDRSSPPPGYIPDELHQVARNGSFTSINSEGEFIPESMEQML-DPLSLSSP 209
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,850,072
Number of Sequences: 237096
Number of extensions: 2512019
Number of successful extensions: 5433
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5424
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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