BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_M14
(883 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 30 0.032
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 4.9
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 23 4.9
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 22 6.5
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 8.6
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 8.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 8.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 8.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 8.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 8.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 8.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 8.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 8.6
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 29.9 bits (64), Expect = 0.032
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -1
Query: 379 PXWGXPPPPPXAXXKKXXXXXXPPPSLXKXPPPXXPPXGP 260
P G P P P PP+ + PPP PP P
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55
Score = 23.8 bits (49), Expect = 2.1
Identities = 12/43 (27%), Positives = 14/43 (32%)
Frame = -2
Query: 375 SGGXXPPPPPXVXKKXGXXXXPPXLXKXXPPXXXPRGGPXXXP 247
SG P P P + PP + PP P P P
Sbjct: 18 SGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -2
Query: 411 PXXPPXXGXPXPSGGXXPPPPP 346
P P P PS G P PP
Sbjct: 31 PQAPQRGSPPNPSQGPPPGGPP 52
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 249 RPPHPRLRREAKPEAKPGNNRPVYIPQPR 277
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 53 RPPHPRLRREAEPEAEPGNNRPVYIPQPR 81
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 109 RPPHPRLRREAEPEAEPGNNRPVYIPQPR 137
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 165 RPPHPRLRREAEPEAEPGNNRPVYIPQPR 193
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 193 RPPHPRLRREAEPEAEPGNNRPVYIPQPR 221
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 221 RPPHPRLRREAEPEAEPGNNRPVYIPQPR 249
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 137 RPPHPRLRREAKPEAEPGNNRPVYIPQPR 165
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 25 RPPHPRLRREAEPEAEPGNNRPVYIPQPR 53
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 53 RPPHPRLRREAEPEAEPGNNRPVYIPQPR 81
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 81 RPPHPRLRREAEPEAEPGNNRPVYIPQPR 109
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 109 RPPHPRLRREAEPEAEPGNNRPVYIPQPR 137
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 165 RPPHPRLRREAEPEAEPGNNRPVYIPQPR 193
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 54 RPPHPRLRREAEPEAEPGNNRPVYIPQPR 82
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 82 RPPHPRLRREAEPEAEPGNNRPVYIPQPR 110
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 110 RPPHPRLRREAEPEAEPGNNRPVYIPQPR 138
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 665 RAPAPXRXRXXLPTAXPXEPXPADXPXPR 751
R P P R P A P P P PR
Sbjct: 54 RPPHPRLRREAEPKAEPGNNRPIYIPQPR 82
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -1
Query: 310 PPSLXKXPPPXXPPXGP 260
PP+ K PP P GP
Sbjct: 164 PPNAYKFRPPLNPRFGP 180
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -1
Query: 310 PPSLXKXPPPXXPPXGP 260
PP+ K PP P GP
Sbjct: 164 PPNAYKFRPPLNPRFGP 180
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -1
Query: 310 PPSLXKXPPPXXPPXGP 260
PP+ K PP P GP
Sbjct: 164 PPNAYKFRPPLNPRFGP 180
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -1
Query: 310 PPSLXKXPPPXXPPXGP 260
PP+ K PP P GP
Sbjct: 164 PPNAYKFRPPLNPRFGP 180
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -1
Query: 310 PPSLXKXPPPXXPPXGP 260
PP+ K PP P GP
Sbjct: 164 PPNAYKFRPPLNPRFGP 180
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -1
Query: 310 PPSLXKXPPPXXPPXGP 260
PP+ K PP P GP
Sbjct: 164 PPNAYKFRPPLNPRFGP 180
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -1
Query: 310 PPSLXKXPPPXXPPXGP 260
PP+ K PP P GP
Sbjct: 164 PPNAYKFRPPLNPRFGP 180
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -1
Query: 310 PPSLXKXPPPXXPPXGP 260
PP+ K PP P GP
Sbjct: 167 PPNAYKFRPPLNPRFGP 183
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,904
Number of Sequences: 438
Number of extensions: 6002
Number of successful extensions: 113
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -