Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_M12
(822 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 77 4e-15
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 59 9e-10
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 55 1e-08
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 51 2e-07
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 47 4e-06
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 47 4e-06
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 45 1e-05
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 44 3e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 42 1e-04
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 38 0.002
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 34 0.028
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 32 0.11
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 28 1.8
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 28 1.8
SPAC5H10.09c |||3-methyl-2-oxobutanoatehydroxymethyltransferase|... 27 3.2
SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces pom... 26 5.6
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 26 7.4
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 26 7.4
SPBC660.13c |ssb1|rpa1, rad11|DNA replication factor A subunit S... 26 7.4
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|... 25 9.8
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 25 9.8
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 76.6 bits (180), Expect = 4e-15
Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Frame = +2
Query: 122 QSVSSISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQCDL--CGKSFIHTSSFKMHKLS 295
+S I EEC K + + L++H H+ + + CD C K+F S K+HK
Sbjct: 17 RSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRC 76
Query: 296 HSGVKPHSC--DVCGLALMTRSHLKRHKRVHSGEKRHECAL--CGKRFSERYNLMAHAKS 463
H+ VKP SC D C T+ HL+RH VH K + C C + FS+ L +H +
Sbjct: 77 HTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISA 136
Query: 464 HH 469
H
Sbjct: 137 CH 138
Score = 43.2 bits (97), Expect = 5e-05
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +2
Query: 152 CEECNKLFPSKNALQRHNNIHTGKLN----YQCDL--CGKSFIHTSSFKMH-KLSHSGVK 310
C C + F + L+ H +H L Y C + C KSF +S+ K H + H G
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 311 PHSCDVCGLALMTRSHLKRHKRVHSGEKRHE 403
CD CG + L+RH + +K H+
Sbjct: 266 AFHCDSCGTKFGYKHMLQRHLERGTCKKAHK 296
Score = 42.3 bits (95), Expect = 8e-05
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Frame = +2
Query: 155 EECNKLFPSKNALQRH-NNIHTGKLNYQCDLCGKSFIHTSSF-KMHKLSHSGVKPH--SC 322
++C F +K LQ H N H ++Y C +S + F K +L + + H SC
Sbjct: 149 QDCELRFATKQKLQNHVNRAHEKIISYSCP--HESCVGHEGFEKWSQLQNHIREAHVPSC 206
Query: 323 DVCGLALMTRSHLKRHKRVH----SGEKRHECAL--CGKRFSERYNLMAHAKSHH 469
+CG T +HL+ H +H K + C + C K F+ L H H
Sbjct: 207 SICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIH 261
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Frame = +2
Query: 236 CDLCGKSFIHTSSFKMHKLSHSGV----KPHSCDV--CGLALMTRSHLKRHKRV-HSGEK 394
C +CG+ F + + H + H K + C + C + S LK+H V H G
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 395 RHECALCGKRFSERYNLMAH 454
C CG +F ++ L H
Sbjct: 266 AFHCDSCGTKFGYKHMLQRH 285
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 155 EECNKLFPSKNALQRHNN-IHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHS--CD 325
E C K F +AL++H + IH G + + CD CG F + + H + K H +
Sbjct: 241 EGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYIN 300
Query: 326 VCGL 337
CG+
Sbjct: 301 ECGI 304
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 58.8 bits (136), Expect = 9e-10
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +2
Query: 227 NYQCDL--CGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLALMTRSHLKRHKRVHSGEKRH 400
NY C C K F + K H +H+ +P C +C + + +RH+++H+G K
Sbjct: 569 NYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAF 628
Query: 401 ECALCGKRFSERYNLMAHAKSHHG 472
C C +RF+ L H KS G
Sbjct: 629 ACVTCNQRFARMDALNRHYKSEVG 652
Score = 56.4 bits (130), Expect = 5e-09
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +2
Query: 161 CNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLA 340
CNK F L+ H N HT +QC +C KSF + H+ H+G+K +C C
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 341 LMTRSHLKRHKRVHSGE 391
L RH + G+
Sbjct: 637 FARMDALNRHYKSEVGQ 653
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 146 WKCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSG 304
++C C K F ++ +RH +HTG + C C + F + H S G
Sbjct: 600 FQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVG 652
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 54.8 bits (126), Expect = 1e-08
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 224 LNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDV--CGLALMTRSHLKRHKRVH 382
+ Y+C C + F SS K+H SH+G +P CD CG A RS+++RH+R+H
Sbjct: 466 VRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 39.5 bits (88), Expect = 6e-04
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 146 WKCEECNKLFPSKNALQRHNNIHTGKLNYQCDL--CGKSFIHTSSFKMHKLSH 298
++C EC + F ++L+ H HTG+ + CD CGK+F S+ + H+ H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 308 KPHSCDVCGLALMTRSHLKRHKRVHSGEKRHECAL--CGKRFSERYNLMAHAKSH 466
+P+ C +C A H RH R H+GEK H C C KRFS L HA+ H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 43.6 bits (98), Expect = 3e-05
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 230 YQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLA-LMTRS-HLKRHKRVH--SGEKR 397
Y+C LC K+F H +H+G KPH C G A +RS L RH R+H + +R
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRR 85
Query: 398 HECALCGKRFSER 436
+ A S R
Sbjct: 86 NAAAAAAANNSAR 98
Score = 31.5 bits (68), Expect = 0.15
Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = +2
Query: 146 WKCEECNKLFPSKNALQRHNNIHTGKLNYQCDL--CGKSFIHTSSFKMHKLSHS 301
+KC C K F RH HTG+ + C C K F + H H+
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 46.8 bits (106), Expect = 4e-06
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 302 GVKPHSCDVCGLALMTRSHLKRHKR-VHSGEKRHECALCGKRFSERYNLMAHAKSH 466
G K C C HL+RH R +H+ EK C +CGKRFS R NL H + H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 152 CEECNKLFPSKNALQRH-NNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKP 313
C EC+K F L+RH ++HT + + C +CGK F + + H+ H P
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 46.8 bits (106), Expect = 4e-06
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 305 VKPHSCDVCGLALMTRSHLKRHKRVHSGEKRHECAL--CGKRFSERYNLMAHAKSH 466
+K + C C + H RH R H+GEK EC+ C KRF+ R L+ H ++H
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 35.5 bits (78), Expect = 0.009
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +2
Query: 227 NYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDV--CGLALMTRSHLKRHKRVH 382
+Y+C C + F H SH+G KP C C R L RH R H
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 31.1 bits (67), Expect = 0.20
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 137 ISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQCDL--CGKSFIHTSSFKMHKLSH 298
+ ++C C ++F + RH HTG+ ++C C K F H +H
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 25.4 bits (53), Expect = 9.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 392 KRHECALCGKRFSERYNLMAHAKSHHG 472
K +EC C + F + + + H +SH G
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTG 28
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +2
Query: 161 CNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLA 340
CNK K ++ H H Y+CDLC F+ K H H +P+ C+ C
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 341 LMTRSHLKRHKR 376
L RHK+
Sbjct: 509 FNRLDALNRHKQ 520
Score = 44.8 bits (101), Expect = 1e-05
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +2
Query: 245 CGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLALMTRSHLKRHKRVHSGEKRHECALCGKR 424
C K + + H +H +P+ CD+C + LKRH R+H + + C C KR
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 425 FSERYNLMAH 454
F+ L H
Sbjct: 509 FNRLDALNRH 518
Score = 30.7 bits (66), Expect = 0.26
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 146 WKCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHK 289
++C+ C F + L+RH IH Y C+ C K F + HK
Sbjct: 473 YRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRHK 519
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 43.6 bits (98), Expect = 3e-05
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = +2
Query: 305 VKPHSCDVCGLALMTRSHLKRHKRVHSGEKRHECAL-------CGKRFSERYNLMAHAKS 463
VK + C+ C A HLKRH R H+ EK C+ CG++FS R L+ H +
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQK 126
Query: 464 HH 469
H
Sbjct: 127 IH 128
Score = 34.3 bits (75), Expect = 0.021
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Frame = +2
Query: 164 NKLFPSKNALQRHNNIHTGKLN-YQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDV---- 328
+K S A ++ N K+ Y C+ C ++F K H SH+ KP +C
Sbjct: 47 SKPVASSTAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGL 106
Query: 329 ---CGLALMTRSHLKRH-KRVH 382
CG R L RH +++H
Sbjct: 107 PTGCGRQFSRRDLLLRHQQKIH 128
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +2
Query: 137 ISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQC 238
+ + CE C + F L+RH HT + + C
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 41.9 bits (94), Expect = 1e-04
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 143 DWKCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSC 322
D E + +K L + I + ++ + CD C K F + HK HS +P C
Sbjct: 3 DHVSENSTNVLSAKRKLTEPSLIDSKRV-FPCDQCAKRFTRHENLTRHKACHSKAEPIPC 61
Query: 323 DVCGLALMTRSHLKRH-KRVHS 385
C + + LKRH +R H+
Sbjct: 62 PYCEIKCKRKDLLKRHIQRFHN 83
Score = 29.9 bits (64), Expect = 0.46
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +2
Query: 320 CDVCGLALMTRSHLKRHKRVHSGEKRHECALCGKRFSERYNLMAHAKSHH 469
CD C +L RHK HS + C C + + L H + H
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 37.9 bits (84), Expect = 0.002
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 329 CGLALMTRSHLKRHKRVHSGEKRHECALCGKRFSERYNLMAHAKSHH 469
C + + HL+RH+R H K C+ C + F+ L H + H
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
Score = 35.9 bits (79), Expect = 0.007
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 179 SKNALQRHNNIHT-GKLNYQCDL--CGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLALMT 349
++ L++ + H G + C C KSF + H+ +H VK SC C A
Sbjct: 8 TEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFAR 67
Query: 350 RSHLKRH 370
L RH
Sbjct: 68 SDVLNRH 74
Score = 33.1 bits (72), Expect = 0.049
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +2
Query: 158 ECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMH 286
+C K F K L+RH H + C C ++F + H
Sbjct: 32 DCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 33.9 bits (74), Expect = 0.028
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +2
Query: 218 GKLNYQCDL--CGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLALMTRSHLKRH 370
G + Y+CD C KSF + H SH+ K C C + L RH
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 31.5 bits (68), Expect = 0.15
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 146 WKCE--ECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMH 286
+KC+ C K F K +RH HT + C C SF + H
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 31.9 bits (69), Expect = 0.11
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Frame = +2
Query: 167 KLFPSKNALQRHNNIHTGKLNYQCDLCG-KSFIHTSSFKM--HKLSHSGVKPHSCDV--C 331
+L + N++ H K + D C K + TS F + H SH+G KP C V C
Sbjct: 54 RLISNINSILDHIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPEC 113
Query: 332 GLALMTRSHLKRHKR-VHSGE 391
+ L +H R VH +
Sbjct: 114 DRSFTRSDALAKHMRTVHEAD 134
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 152 CEECNKLFPSKNALQRHNNIHTGKLN 229
C CNK F S+N L+ H N K N
Sbjct: 272 CMVCNKNFRSQNQLENHENSKKHKKN 297
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = -1
Query: 249 PHRSHW*LSFPVWMLLCLWSAFFEGNSLLHSSHFQSLILETDWPVVIA 106
PH++ W + + LW + + +L+ +FQS +L +W +I+
Sbjct: 351 PHQASWNIYNSFDNSMVLWCPYGKNKTLICLLNFQSSLLSFEWISIIS 398
>SPAC5H10.09c
|||3-methyl-2-
oxobutanoatehydroxymethyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 267
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 594 AFFCKVAEKHKENILXYA-IYFPVYSTWEGTCANAGXSVR 710
A+ K + N L A + F YSTWE C NA +R
Sbjct: 68 AYHTKSVRRGAPNRLLMADLPFMSYSTWEDACKNAATVMR 107
>SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = -3
Query: 106 ERLSQSHSHRYHWSG----DNDLAIETCVGSGARGKHS 5
ER Q++S R HW G D+ +E V G+ HS
Sbjct: 268 ERSEQAYSLRLHWYGKLTPKTDIIVERMVRQGSTLSHS 305
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 278 KMHKLSHSGVKPHSCDVCGLALMTRSH 358
++HK+++SGV+ + G LM R H
Sbjct: 5 QIHKITYSGVEVFEYTINGFPLMKRCH 31
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 7.4
Identities = 21/89 (23%), Positives = 41/89 (46%)
Frame = +2
Query: 125 SVSSISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSG 304
SVS ++D + + FPS ++Q + +H+ N DL S + + F +
Sbjct: 446 SVSQVNDTFVKSSDSTFPSSQSMQSPSKLHSLTSN-ATDLLSSSSLKKNFFSQQEADEVE 504
Query: 305 VKPHSCDVCGLALMTRSHLKRHKRVHSGE 391
+ ++ D+ G A+ +L+R R+ E
Sbjct: 505 LS-NNYDLQGAAV---QYLQRRLRMVEDE 529
>SPBC660.13c |ssb1|rpa1, rad11|DNA replication factor A subunit Ssb1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 609
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2
Query: 146 WKCEECNKLFPS---KNALQRHNNIHTGKLNYQC-DLCGKSFIHTSSFKMHKLSHS 301
W+CE+CNK + + + + HTG+L D GK +H ++ +++ L +
Sbjct: 493 WRCEKCNKEYDAPQYRYIITIAVGDHTGQLWLNVFDDVGKLIMHKTADELNDLQEN 548
>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 9.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 219 PVWMLLCLWSAFFEGNSLLHSSHFQSL 139
P+++ +W AFF G +L + H+ S+
Sbjct: 390 PIYIFFQIWGAFF-GGALAYGYHWSSI 415
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 25.4 bits (53), Expect = 9.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 174 NSLLHSSHFQSLILETD 124
NS+L S H++SL+L D
Sbjct: 1489 NSMLQSGHYESLVLSLD 1505
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,447,125
Number of Sequences: 5004
Number of extensions: 44291
Number of successful extensions: 213
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 402440190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -