Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_M08
(911 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 42 5e-04
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.31
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.55
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 32 0.73
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.7
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 30 2.2
08_02_1063 + 24024030-24024506,24024803-24024856,24024965-240251... 30 2.2
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 29 3.9
05_06_0282 + 26915249-26915881 29 5.1
01_01_0995 + 7875273-7875495,7876196-7876274,7876422-7876536,787... 29 5.1
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 29 6.8
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 9.0
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 28 9.0
06_03_1381 - 29754405-29754525,29754617-29754671,29755383-297554... 28 9.0
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 25 9.5
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 42.3 bits (95), Expect = 5e-04
Identities = 36/135 (26%), Positives = 36/135 (26%), Gaps = 5/135 (3%)
Frame = -2
Query: 601 PPPPXXXXXAGGPXXPPXXGRXAGXPAXXPXXNXTXRGXGVXXXXAXGRGGGXXXP---A 431
PPPP AG P PP G G P P G GG P
Sbjct: 1099 PPPPSIG--AGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGG 1156
Query: 430 EXPXRXPPPRXXVGGGXPXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXPPPXFPPG--GG 257
PPP GG P PP P P PPG GG
Sbjct: 1157 LGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGG 1216
Query: 256 XXPPXXXXXXXKXPG 212
PP PG
Sbjct: 1217 PPPPPGGRGLPAPPG 1231
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/76 (27%), Positives = 21/76 (27%), Gaps = 4/76 (5%)
Frame = +3
Query: 384 PPPTXXRGGGXRXGXSAGXXXPPPRP----XAXXXXTPXPRXVXXSXGXXAGXPAXRPXX 551
PPP RGG G PPP P TP G P P
Sbjct: 1164 PPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGG 1223
Query: 552 GGXXGPPAXXXXXGGG 599
G PP G G
Sbjct: 1224 RGLPAPPGGRGVVGHG 1239
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -1
Query: 599 PPXXXXXGGXGAXXXXPXXPXSGXPRXXPXRXPXPPXXGGXXLXXXRXGGGXAXXG 432
PP GG G P P P P P PP GG L G G G
Sbjct: 1186 PPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPP--GGRGLPAPPGGRGVVGHG 1239
Score = 28.7 bits (61), Expect = 6.8
Identities = 22/80 (27%), Positives = 23/80 (28%)
Frame = +1
Query: 304 GGXPXPXXFXXPXXXXXXXXAPRGXAXXPPHXGGGGGAXXVXRPXXAXPPPXRXXXXXXP 483
GG P P A G A PP G GG P A PP P
Sbjct: 1158 GGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGP 1217
Query: 484 PXXGGXGXLXGXXRGXPLSG 543
P G L G + G
Sbjct: 1218 PPPPGGRGLPAPPGGRGVVG 1237
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.1 bits (72), Expect = 0.31
Identities = 40/153 (26%), Positives = 41/153 (26%), Gaps = 4/153 (2%)
Frame = +2
Query: 182 PEXQNRXXPXXXXFXXXXTXXGGXXXPPGGEXXGGAXPXXGGGXXXPXFFXXXXXXXXXX 361
PE + P GG P GG GGA P GGG P
Sbjct: 74 PEARTTPRPLPIKLLGLPPGGGGAPGPLGG---GGARPPGGGGGGGP-----PSLPPGAG 125
Query: 362 XXXXXXXPXPHTXAGGGXPXRXF----GRXXRXPPPXXGXXXXXPXXXXGXVXXGGXXGX 529
P P GGG P R G PP G G GG G
Sbjct: 126 GGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGG---GGGGGGP 182
Query: 530 XRXPAXXGXXAXPPXXRXXXRXGGXSXXXAXGG 628
R P G P R GG GG
Sbjct: 183 GRAPGGGGGGGGP--GRAPGGGGGGGGLGGGGG 213
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 7/59 (11%)
Frame = +3
Query: 447 PPPRPXAXXXXTPXPRXVXX-------SXGXXAGXPAXRPXXGGXXGPPAXXXXXGGGG 602
P P P A P P + + G G A P GG GPP+ GGGG
Sbjct: 70 PKPDPEARTTPRPLPIKLLGLPPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGG 128
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +1
Query: 247 GGXXPPRGGXXGGGXSXXGGGXPXPXXFXXPXXXXXXXXAPRGXAXXPPHXGGGGG 414
GG PP GGG GGG P G P GGGGG
Sbjct: 342 GGVFPPTPDLGGGG---GGGGGGTKVRVCAPKDISGGGGGGGGMLDKPDEAGGGGG 394
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.55
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -2
Query: 628 PXXXXPXRXPPPPXXXXXAGGPXXPPXXGRXAGXPAXXP 512
P P + PPPP P PP G+ G P P
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/98 (23%), Positives = 27/98 (27%), Gaps = 2/98 (2%)
Frame = -1
Query: 659 GNDAPXXXRRXXRXXXXETAPPXXXXXGGXGAXXXXPXXPXSGXPRXXPXRXPXPPXXGG 480
G ++P + APP A P P + P P P PP G
Sbjct: 293 GRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKG 352
Query: 479 XXLXXXRXGGG--XAXXGRXTXXAPPPPPXCGGXXAXP 372
G PPPPP GG P
Sbjct: 353 PPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 309 PPPXXGXAPPXXSPPGGXXXPP 244
PPP G +PP PPGG P
Sbjct: 356 PPPPKGPSPPPPPPPGGKKGGP 377
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 601 PPPPXXXXXAGGPXXPPXXGRXAGXPA 521
PPPP GGP PP G + PA
Sbjct: 365 PPPPPPGGKKGGPPPPPPKGGASRPPA 391
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 31.9 bits (69), Expect = 0.73
Identities = 24/74 (32%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = +3
Query: 384 PPPTXXRGGGXRXGXSAGXXXPPPRPXAXXXXTPXPRXVXXSX-GXXAGXPAXRPXXGGX 560
PPP+ GG S G PPP P + S G G P P GG
Sbjct: 338 PPPSSYGGGPGSYPPSYGA--PPPNPPYSGGAPGGQGSLPPSYDGGYGGRPM--PGGGGP 393
Query: 561 XGPPAXXXXXGGGG 602
PP GGGG
Sbjct: 394 GAPPPYHGGGGGGG 407
Score = 28.3 bits (60), Expect = 9.0
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = -2
Query: 598 PPPXXXXXAGGPXX-PPXXGRXAGXPAXXPXXNXTXRGXGVXXXXAXGRGGGXXXPAEXP 422
PPP GGP PP G P P G G G GG P
Sbjct: 338 PPPSSY--GGGPGSYPPSYG---APPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGG 392
Query: 421 XRXPPPRXXVGGG 383
PPP GGG
Sbjct: 393 PGAPPPYHGGGGG 405
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/80 (25%), Positives = 21/80 (26%), Gaps = 1/80 (1%)
Frame = -2
Query: 613 PXRXPPPPXXXXXAGGPXXPPXXGRXAGXPAXXPXXNXTXRGXGVXXXXAXGRGGGXXXP 434
P PP G P PP P P + G G P
Sbjct: 305 PHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPP 364
Query: 433 AEXPXRXPPP-RXXVGGGXP 377
P PPP GGG P
Sbjct: 365 GPGPGPPPPPGAAGRGGGGP 384
Score = 29.9 bits (64), Expect = 2.9
Identities = 24/81 (29%), Positives = 24/81 (29%), Gaps = 8/81 (9%)
Frame = +3
Query: 384 PPPTXXRGGGXRXGXSAGXXXPPP-RPXAXXXXTPXPRXVXXSXGXXAGXP-------AX 539
PPP G G G PPP P A P P G P A
Sbjct: 302 PPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAP 361
Query: 540 RPXXGGXXGPPAXXXXXGGGG 602
RP G PP GGG
Sbjct: 362 RPPGPGPGPPPPPGAAGRGGG 382
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 413 PPPPPXCGGXXAXPRGAXXXXXXXXGXKKXXGXGXPPP 300
PPPPP P G G G G PPP
Sbjct: 350 PPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPP 387
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +1
Query: 235 NXXXGGXXPPRGGXXGGGXSXXGGGXPXPXXFXXPXXXXXXXXAPRGXAXXPPHXGGG 408
N GG PRG GG GGG P F PRG P G G
Sbjct: 7 NPRGGGGGGPRGFGGGGPRGFGGGG---PRGFGGGGPRGFGGGGPRGFGGSKPRRGNG 61
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 283 GGXSXXGGGXPXPXXFXXPXXXXXXXXAPRGXAXXPPHXGGGGG 414
GG + GGG P F PRG P GGGG
Sbjct: 4 GGGNPRGGGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGFGGGG 47
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +1
Query: 250 GXXPPRGGXXGGGXSXXGGGXPXPXXFXXPXXXXXXXXAPRGXAXXPPHXGGG 408
G PRGG GG GGG P F PRG P GG
Sbjct: 4 GGGNPRGGGGGGPRGFGGGG---PRGFGGGGPRGFGGGGPRGFGGGGPRGFGG 53
>08_02_1063 +
24024030-24024506,24024803-24024856,24024965-24025118,
24025314-24025388,24025511-24025788,24026023-24026253,
24026522-24026620,24026740-24026889,24027830-24027976,
24028525-24028575,24028647-24028819,24029018-24029147,
24029361-24029458,24029655-24029892,24030634-24030837,
24031003-24031083,24031296-24031535
Length = 959
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/63 (34%), Positives = 24/63 (38%)
Frame = +1
Query: 121 RNITVPHDRLAPRNVRSGLPPRXPKSXXTXXXXFXXIXNXXXGGXXPPRGGXXGGGXSXX 300
R + VP D L R L R P F + G PPRGG GGG
Sbjct: 68 RRLAVPGDLLLLSLARLAL--RGPAPRAEARRWFASLSAASNG---PPRGGGGGGGGDGG 122
Query: 301 GGG 309
GGG
Sbjct: 123 GGG 125
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +1
Query: 400 GGGGGAXXVXRPXXAXPPPXRXXXXXXPPXXGGXGXLXGXXRGXPLSG 543
GGGGGA + PPP PP G G G SG
Sbjct: 74 GGGGGAASNNGGGGSAPPPGNLAGSGTPPAKGSGGDGGGAPANNSTSG 121
>05_06_0282 + 26915249-26915881
Length = 210
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/78 (30%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Frame = +1
Query: 364 APRGXAXXPPHXGGGGGAXXVXRPXXAXPPPXRXXXXXXPPXXGGXGXLXGXXRGXPL-- 537
+PR P GGGG + RP PPP P GG G PL
Sbjct: 63 SPRPHGRVTPLADGGGGG-VLRRPPGRGPPPP-GPGGHVGPLSGGVSSSAGRSSTRPLMI 120
Query: 538 ----SGXXGXXXXAPXPP 579
G G AP PP
Sbjct: 121 SDDDGGVSGRQWPAPPPP 138
>01_01_0995 +
7875273-7875495,7876196-7876274,7876422-7876536,
7878507-7878761
Length = 223
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = +3
Query: 405 GGGXRXGXSAGXXX-PPPRPXAXXXXTPXPRXVXXSXGXXAGXPAXRPXXGGXXGPPAXX 581
GGG G G PPPRP P P G P RP GG G PA
Sbjct: 23 GGGGEYGTFQGPPSYPPPRPPVVGYPQPAPPPGLYGQGD----PYYRP-RGGYQGIPARD 77
Query: 582 XXXGGGG 602
G G
Sbjct: 78 YEAGARG 84
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 250 GXXPPRGGXXGGGXSXXGGGXPXPXXFXXPXXXXXXXXAPRGXAXXPPHXGGGG 411
G PRGG GG GGG P PRG P G GG
Sbjct: 12 GGGNPRGGGGGGPRGCGGGG---PRSGGGGGPRGGGGGGPRGSGSSKPRRGDGG 62
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 309 PPPXXGXAPPXXSPPGGXXXPP 244
PPP APP PPG PP
Sbjct: 616 PPPRPPGAPPPPPPPGKPGGPP 637
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 631 APXXXXPXRXPPPPXXXXXAGGPXXPP 551
+P P PPPP GGP PP
Sbjct: 919 SPPPPRPPGAPPPPPPPGKPGGPPPPP 945
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 309 PPPXXGXAPPXXSPPGGXXXPP 244
PPP APP PPG PP
Sbjct: 921 PPPRPPGAPPPPPPPGKPGGPP 942
>06_03_1381 -
29754405-29754525,29754617-29754671,29755383-29755440,
29755819-29755988,29756576-29756780
Length = 202
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 455 GGGXAXXGRXTXXAPPPPPXCGGXXAXPRG 366
GGG A R PPPP GG +G
Sbjct: 8 GGGGAGEARGADAPPPPPVAAGGGGGAVKG 37
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 25.4 bits (53), Expect(2) = 9.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -2
Query: 634 DAPXXXXPXRXPPPPXXXXXAGGPXXPP 551
DAP P PPPP P PP
Sbjct: 347 DAPKLMPPPPPPPPPPPPPPPPPPPRPP 374
Score = 21.0 bits (42), Expect(2) = 9.5
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -2
Query: 436 PAEXPXRXPPPRXXVGGGXP 377
P P R PPP + G P
Sbjct: 366 PPPPPPRPPPPPPPIKKGAP 385
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,577,954
Number of Sequences: 37544
Number of extensions: 487950
Number of successful extensions: 3578
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3126
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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