Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_M07
(792 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 76 3e-14
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 64 1e-10
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 64 1e-10
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 54 1e-07
02_01_0168 + 1162447-1162866,1162940-1163317,1163606-1163829,116... 31 0.79
01_06_0514 + 29955129-29955796,29955903-29956023 31 0.79
03_05_0292 + 22846273-22846377,22847161-22847823 30 1.8
09_06_0230 + 21717225-21717301,21717888-21717972,21718045-217181... 29 3.2
01_07_0015 + 40469839-40470672,40471185-40471229,40471255-40471266 29 3.2
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 29 4.2
06_01_0255 - 1900508-1900549,1900728-1900817,1900902-1900995,190... 29 5.6
02_04_0621 - 24502383-24502476,24502532-24504015,24504125-245041... 29 5.6
08_02_1488 + 27485154-27485390,27485441-27485968 28 7.4
11_01_0559 - 4406815-4406922,4408954-4409042,4409177-4409270,440... 28 9.8
07_01_0839 + 6823028-6823074,6823449-6823992,6827017-6828258 28 9.8
05_01_0180 + 1268129-1268237,1268382-1268731,1268903-1269808,127... 28 9.8
01_05_0111 - 18230195-18230239,18230541-18230615,18231379-182315... 28 9.8
>07_01_0747 -
5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 76.2 bits (179), Expect = 3e-14
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 23/173 (13%)
Frame = +3
Query: 36 DDIAYTLNLRGSDIEYNPVFFSYLIVMETNVVLYWGDGQLPPSVTDHLREEGVESIEGKP 215
D++A+ LN+RGSD+ +PVF+SYLIV +T L+ + ++ V +HL + GV+ KP
Sbjct: 280 DEVAWLLNMRGSDVPNSPVFYSYLIVEDTAATLFVDNNKVSEDVLEHLEKAGVKL---KP 336
Query: 216 YGDILEGLKEMARE-----LSESGDGRHVIWLSNDANEAIHR------------------ 326
Y IL ++ +A L S ++ + + E +
Sbjct: 337 YEAILSDVERLAENGAKLWLDSSSINAAIVNVFRSSCERYVKKRGKAGRQIGKESSQGDP 396
Query: 327 AASGSDVLKRPIDLISEVSPVKLAKLVKNEIXLQGFRNCHIXDGXAVVRFFRW 485
A S V ++ + +VSP LAK VKNE ++G ++ H+ D A+ F+ W
Sbjct: 397 ATGSSGVQNGTVNALYKVSPATLAKAVKNEAEVEGMKSSHLRDAAALAEFWCW 449
>11_05_0099 -
19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 64.1 bits (149), Expect = 1e-10
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Frame = +3
Query: 36 DDIAYTLNLRGSDIEYNPVFFSYLIVMETNVVLYWGDGQLPPSVTDHLREEGVESIEGKP 215
D++A+ N+RG D+ Y+PV SY IV + Y ++ V +++ + G++ K
Sbjct: 252 DEVAWLYNIRGDDVHYSPVVHSYSIVTLHSAFFYVDKRKVSVEVQNYMTDNGIDI---KD 308
Query: 216 YGDILEGLKEMARELSESGDGRHVIWLSNDANEAIHRAASGSD---VLKRPID---LISE 377
Y + +A + + ND NE + L +D ++
Sbjct: 309 YNMVQSDASLLASGQLKGSAVNGSSYGENDMNENSKVWIDSNSCCLALYSKLDQDQVLML 368
Query: 378 VSPVKLAKLVKNEIXLQGFRNCHIXDGXAVVRFFRW 485
SP+ L K VKN + L G R HI DG AVV++ W
Sbjct: 369 QSPIALPKAVKNPVELDGLRKAHIRDGAAVVQYLAW 404
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 64.1 bits (149), Expect = 1e-10
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Frame = +3
Query: 36 DDIAYTLNLRGSDIEYNPVFFSYLIVMETNVVLYWGDGQLPPSVTDHLREEGVESIEGKP 215
D++A+ N+RG+D+ Y+PV SY IV + Y ++ V +++ E G++ K
Sbjct: 202 DEVAWLYNIRGNDVHYSPVVHSYSIVTLHSAFFYVDKRKVSVEVQNYMTENGIDI---KD 258
Query: 216 YGDILEGLKEMARELSESGDGRHVIWLSNDANEAIHRAASGSD---VLKRPID---LISE 377
Y + +A + ND NE + L +D ++
Sbjct: 259 YNMVQSDASLLASGQLKGSAVNGSSHGENDMNENSKVWIDSNSCCLALYSKLDQYQVLML 318
Query: 378 VSPVKLAKLVKNEIXLQGFRNCHIXDGXAVVRFFRW 485
SP+ L K VKN + L G R HI DG AVV++ W
Sbjct: 319 QSPIALPKAVKNPVELDGLRKAHIRDGAAVVQYLAW 354
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 54.4 bits (125), Expect = 1e-07
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Frame = +3
Query: 36 DDIAYTLNLRGSDIEYNPVFFSYLIVMETNVVLYWGDGQLPPSVTDHLREEGVESIEGKP 215
D++A+ N+RG+D+ Y+PV SY IV + Y + ++ H E V + +
Sbjct: 235 DEVAWLYNIRGNDVHYSPVVHSYSIVTLHSAFFYVDNRKVSVENRSHDFEGHVVNCDSY- 293
Query: 216 YGDILEGLKEMARELSESG-DGRHVIWLSND-----ANEAIHRAASGSDVLKRPID---- 365
L ++ +SE+G D R + +D N + H +D K ID
Sbjct: 294 -------LVKVQSYMSENGIDIRDYNMVQSDLKGSAVNGSSHEGNGMNDNSKILIDNSCC 346
Query: 366 --LISEV---------SPVKLAKLVKNEIXLQGFRNCHIXDGXAVVRFFRW 485
L S++ SPV L+K VKN + L G R HI DG AVV++ W
Sbjct: 347 LALYSKLDEDQVLILQSPVALSKAVKNPVELDGLRKAHIRDGVAVVQYLAW 397
>02_01_0168 +
1162447-1162866,1162940-1163317,1163606-1163829,
1163929-1163992,1164521-1164717,1164849-1165062
Length = 498
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 182 GGGCREYRGQTLRGHFGGLKGNGARTVGERRR 277
GGGC R + +GG GNG R ERRR
Sbjct: 5 GGGCFGGRSGVVGWRYGGFVGNGGRRGFERRR 36
>01_06_0514 + 29955129-29955796,29955903-29956023
Length = 262
Score = 31.5 bits (68), Expect = 0.79
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Frame = -3
Query: 478 KNLTTAXPSXMWQLRKPCSXISFLTNLASFTGDTSDIKSIG--------RFRTSDPEAAL 323
K L P W P S + F NL+S TG T+ +KS G +FRT+ P L
Sbjct: 32 KGLNAVDPDSAWS---PTSPLDF-KNLSSSTGSTN-LKSSGLLGVEADQKFRTNPPRVGL 86
Query: 322 WIASLASLDSQITCL 278
+ + D +CL
Sbjct: 87 GLVDALTADESSSCL 101
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +2
Query: 158 PLRDGPPEGGGCREYRGQTLRGHFGGLKGNGARTVGERR 274
P R GP E GG G RG GG +G+GAR G R
Sbjct: 35 PCRLGPEELGGSHGGGGGRGRGGGGGGRGDGARDGGGAR 73
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 167 DGPPEGGGCREYRGQTLRGHFGGLKGNGARTVGE 268
DG +GGG R G+ RG GG +G G R GE
Sbjct: 64 DGARDGGGARGGGGRGARGG-GGARGGGGRHGGE 96
>09_06_0230 +
21717225-21717301,21717888-21717972,21718045-21718165,
21718244-21718368,21718940-21718984,21719082-21719345,
21720067-21720111,21720182-21720212,21721644-21721693,
21722433-21724310,21724406-21724564,21724821-21724939,
21726917-21727059,21727670-21727735,21728184-21728317,
21728454-21728591,21728927-21729186,21729295-21729406,
21730727-21730909
Length = 1344
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = +3
Query: 228 LEGLKEMARELSESGDGRHVIWLSNDANEAIHRAASGSDVLKR----PIDLI-SEVSPVK 392
L+GL ++ ++ + DGR ++ L++D+ A H+ S L++ + L+ S +SP
Sbjct: 462 LDGLVSLSGQMLNAQDGRSLVSLTHDSLAAAHQLTSADVFLQKAEFQQLQLLCSSISPTP 521
Query: 393 LAKLVKN 413
+VK+
Sbjct: 522 EPSVVKS 528
>01_07_0015 + 40469839-40470672,40471185-40471229,40471255-40471266
Length = 296
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 243 EMARELSESGDGRHVIWLSNDANEAIHRAASGSDVLKRPIDLISEVSP 386
++ REL DG V WL A AI AA+G+ + P ++ V+P
Sbjct: 113 QLTRELGHKSDGETVQWLLQQAEPAI-VAATGTGTI--PASALASVAP 157
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +2
Query: 170 GPPEGGGCREYRGQTLRGHFGGLKGNGARTVG 265
GPP GGG R Y RG +GG G G R G
Sbjct: 47 GPPGGGGGRGYEPGGGRG-YGGGGGGGGRGYG 77
>06_01_0255 -
1900508-1900549,1900728-1900817,1900902-1900995,
1901119-1901315,1901838-1901957,1902559-1902654,
1902744-1902869,1903125-1903221,1904476-1904546,
1904629-1904724,1904803-1904955,1904993-1905136
Length = 441
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 83 QSCLLFVSDRDGDQCRSVLGRRSTAP 160
++C L + DR DQCRS+L + S P
Sbjct: 35 ETCELLIVDRPIDQCRSILKKFSIFP 60
>02_04_0621 -
24502383-24502476,24502532-24504015,24504125-24504177,
24504871-24504984,24505068-24505202,24505960-24506055,
24506692-24506827
Length = 703
Score = 28.7 bits (61), Expect = 5.6
Identities = 24/87 (27%), Positives = 34/87 (39%)
Frame = -3
Query: 505 RQFDXGAHLKNLTTAXPSXMWQLRKPCSXISFLTNLASFTGDTSDIKSIGRFRTSDPEAA 326
RQ G+ L N T S QL CS SFL + SD I S+
Sbjct: 412 RQDQHGSELVNFDTGLLSSFDQLYAKCSASSFLDTRNGIL-NHSDFSYISNLAASESNDI 470
Query: 325 LWIASLASLDSQITCLPSPLSDSSRAI 245
+ AS++ L+S + P S+ +
Sbjct: 471 VSNASMSCLNSIFSTSEHPFQLGSKRL 497
>08_02_1488 + 27485154-27485390,27485441-27485968
Length = 254
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 141 GDGQLPP-SVTDHLREEGVESIEGKPYGDILEG 236
GDG L P H R +G EG+ YG LEG
Sbjct: 190 GDGDLAPFPFPHHRRRKGRAPSEGRAYGPRLEG 222
>11_01_0559 -
4406815-4406922,4408954-4409042,4409177-4409270,
4409344-4409481,4409570-4409727,4409826-4409916,
4410003-4411637
Length = 770
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 231 EGLKEMARELSES--GDGRHVIWLSNDANEAIHRAASGSDVLKRPIDLIS 374
+G K + ++S S GDGR+V+ S D+N I + + L + I +++
Sbjct: 705 KGFKNTSSQISASYSGDGRYVVCSSEDSNVYIRKMVTIVYTLNKVIKILT 754
>07_01_0839 + 6823028-6823074,6823449-6823992,6827017-6828258
Length = 610
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 237 LKEMARELSESGDGRHVI 290
+KEM +LS S DGRHVI
Sbjct: 372 VKEMEAQLSNSKDGRHVI 389
>05_01_0180 +
1268129-1268237,1268382-1268731,1268903-1269808,
1270120-1271361
Length = 868
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/49 (42%), Positives = 23/49 (46%)
Frame = +2
Query: 104 SDRDGDQCRSVLGRRSTAPLRDGPPEGGGCREYRGQTLRGHFGGLKGNG 250
SD Q S G RST P PP GG RG + RG GG +G G
Sbjct: 25 SDYGFSQGSSGYGSRSTVPPSRPPPAAGG---GRGSS-RGGRGGGRGRG 69
>01_05_0111 -
18230195-18230239,18230541-18230615,18231379-18231566,
18232416-18232739,18232926-18233115
Length = 273
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 138 WGDGQLPPSVTDHLREEGVESIEGKPYGDI 227
+G G L S+T H +EE VES++ PY I
Sbjct: 208 YGKG-LHRSLTTHEKEEVVESVDSSPYKSI 236
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,405,439
Number of Sequences: 37544
Number of extensions: 386309
Number of successful extensions: 1349
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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