Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_M07
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidas...    78   8e-15
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ...    44   9e-05
U14635-1|AAC46657.2|  448|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical pr...    29   2.9  

>AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidase p
           protein 1 protein.
          Length = 616

 Score = 77.8 bits (183), Expect = 8e-15
 Identities = 48/150 (32%), Positives = 79/150 (52%)
 Frame = +3

Query: 36  DDIAYTLNLRGSDIEYNPVFFSYLIVMETNVVLYWGDGQLPPSVTDHLREEGVESIEGKP 215
           DD+ + LN+RGSDI YNP+ +SYL V    + ++  + +L      H  +  V SI   P
Sbjct: 205 DDVMWLLNIRGSDIPYNPLAYSYLFVAMREIHVFIDNEKLDEKSRAHFHKSNV-SIH--P 261

Query: 216 YGDILEGLKEMARELSESGDGRHVIWLSNDANEAIHRAASGSDVLKRPIDLISEVSPVKL 395
           YG++   +    +   E+    H+++L+ + N AI     GS + +   + + + S V+ 
Sbjct: 262 YGEVYSWISNWLK-AKEASKEPHMVYLTPETNYAI-----GSIIGEE--NSMVDTSLVQT 313

Query: 396 AKLVKNEIXLQGFRNCHIXDGXAVVRFFRW 485
           AK  KN+  +QG RN H+ D  A+V F  W
Sbjct: 314 AKATKNDHEMQGMRNSHLRDSAALVEFLCW 343


>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
            protein Y45G5AM.2 protein.
          Length = 1061

 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 38/147 (25%), Positives = 69/147 (46%)
 Frame = +3

Query: 36   DDIAYTLNLRGSDIEYNPVFFSYLIVMETNVVLYWGDGQLPPSVTDHLREEGVESIEGKP 215
            +DI + LN+RG+D+ YNPV +SYL +  ++V L+    +L      +   + ++  + K 
Sbjct: 652  EDIMWLLNIRGNDLPYNPVTYSYLFITMSDVRLFIDAKRLNDVSKAYFARQSIDVDDYKA 711

Query: 216  YGDILEGLKEMARELSESGDGRHVIWLSNDANEAIHRAASGSDVLKRPIDLISEVSPVKL 395
                +     ++   S   D +  I +S + N  I R   G D        + + S ++ 
Sbjct: 712  ASPYI--YDWISATKSSFADKK--ILISPETNYLIGRLI-GED------HSMIDPSIMER 760

Query: 396  AKLVKNEIXLQGFRNCHIXDGXAVVRF 476
             K +KN   L+G R  ++ D  A+V F
Sbjct: 761  IKKIKNTDQLKGMRASNLRDSIAIVEF 787


>U14635-1|AAC46657.2|  448|Caenorhabditis elegans Hypothetical
           protein C27H5.3 protein.
          Length = 448

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +2

Query: 104 SDRDGDQCRSVLGRRSTAPLRDGPPEGGG 190
           SDR G       G +   P RDGPP GGG
Sbjct: 150 SDRQGGPPGGRGGYQDRGPRRDGPPSGGG 178


>Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical
           protein F58G11.2 protein.
          Length = 960

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +2

Query: 170 GPPEGGGCREYRGQTLRGHFGGLKGNGARTVGERRRETRDLAVQ 301
           G   GGG REY     R +     GNG    G+RRRE  + + Q
Sbjct: 5   GNNAGGGGREYHDD--RSNRDHRHGNGGSDAGQRRREDHNSSYQ 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,107,135
Number of Sequences: 27780
Number of extensions: 270453
Number of successful extensions: 829
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)