Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_M06
(816 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.3
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.3
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.0
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 3.0
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 29 5.3
L11148-1|AAA28104.1| 237|Caenorhabditis elegans lin-31 protein ... 28 9.2
AF016669-4|AAB66096.1| 237|Caenorhabditis elegans Abnormal cell... 28 9.2
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 357
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 583 EFHTPTTPDLTSISINPLNAVLKGVRA 663
+F TP TP L+ +I L+ VLK +RA
Sbjct: 1016 DFFTPDTPRLSPSAIQDLDKVLKKIRA 1042
>L11148-1|AAA28104.1| 237|Caenorhabditis elegans lin-31 protein
protein.
Length = 237
Score = 27.9 bits (59), Expect = 9.2
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 536 PSPGDLGYINPITKSPNSIHQPPQT*HPFPSIP*T-PY*KEFAPGLKPPLSSXVHQRXSP 712
P+P + NP+ P PP FP++P + P F PG+ P S ++
Sbjct: 125 PAPSKISRKNPLPLLPEPPITPPLLSSLFPNLPPSLPNFCLFPPGMDPTKSLLLNPLSLL 184
Query: 713 LVMGMVKGSPXF 748
L+ +K S F
Sbjct: 185 LMPHFLKNSSNF 196
>AF016669-4|AAB66096.1| 237|Caenorhabditis elegans Abnormal cell
lineage protein 31 protein.
Length = 237
Score = 27.9 bits (59), Expect = 9.2
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 536 PSPGDLGYINPITKSPNSIHQPPQT*HPFPSIP*T-PY*KEFAPGLKPPLSSXVHQRXSP 712
P+P + NP+ P PP FP++P + P F PG+ P S ++
Sbjct: 125 PAPSKISRKNPLPLLPEPPITPPLLSSLFPNLPPSLPNFCLFPPGMDPTKSLLLNPLSLL 184
Query: 713 LVMGMVKGSPXF 748
L+ +K S F
Sbjct: 185 LMPHFLKNSSNF 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,913,920
Number of Sequences: 27780
Number of extensions: 349747
Number of successful extensions: 1066
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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