Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_L21
(821 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 76 7e-14
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 74 2e-13
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 69 6e-12
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 64 2e-10
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 64 2e-10
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 63 5e-10
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 52 1e-06
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 50 5e-06
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 49 9e-06
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 48 2e-05
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 46 5e-05
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 46 8e-05
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 46 8e-05
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 46 8e-05
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 46 8e-05
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 38 0.013
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 38 0.013
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 38 0.013
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 31 1.4
AY118918-1|AAM50778.1| 446|Drosophila melanogaster LD22559p pro... 31 1.4
AE014297-2416|AAF55475.1| 446|Drosophila melanogaster CG18012-P... 31 1.4
AY051480-1|AAK92904.1| 736|Drosophila melanogaster GH14313p pro... 31 2.5
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 31 2.5
AE013599-3496|AAM71132.2| 736|Drosophila melanogaster CG3499-PB... 31 2.5
L20894-1|AAA76834.1| 1767|Drosophila melanogaster receptor prote... 30 4.4
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 30 4.4
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 75.8 bits (178), Expect = 7e-14
Identities = 59/251 (23%), Positives = 113/251 (45%), Gaps = 9/251 (3%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRLDAFIDDLTFEI--VGPPTPTCYPYNIALRPSTIDLALLRNVTLR 197
HT W N G++L I T ++ V P +PT +P ++ P ID A+ +N++
Sbjct: 142 HTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLNKLPDLIDFAVTKNISRS 201
Query: 198 LRSIEAMSELDSDHRPVVMQLGR-PHN---PVTVTRTMVDWNKLGTCLADAAPPILPYGP 365
L E + +L SDH PV++ L R N P +T + +W + ++ + P
Sbjct: 202 LVKAECLPDLSSDHSPVLIHLRRYAENVKPPTRLTSSKTNWLRYKKYISSH----IELSP 257
Query: 366 DSNPSPEDTVESINIITDHISSAIIRSSKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRAY 545
N E +ES I +A ++ ++ + + + + L+ V+ R +
Sbjct: 258 KLN--TESDIESCTCALQSILTAAALTATPKITNNTINSKKTNVQIEQLVHVKRRLRREW 315
Query: 546 DRLPTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPS---HQAYWRLARTLKSETI 716
+ + + +++ R++ + L +D+ Y+EQL P+ ++ WR TL+ T
Sbjct: 316 QSSRSPTAKQKLKVATRKLANALKQEEDDDQRRYIEQLTPTGTKQKSLWRAHSTLRPPT- 374
Query: 717 ATMPPLVRPSG 749
T+ P+ SG
Sbjct: 375 ETVLPIKNSSG 385
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 74.1 bits (174), Expect = 2e-13
Identities = 71/252 (28%), Positives = 112/252 (44%), Gaps = 10/252 (3%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRLDAFID--DLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLR 197
HT W + G++L + + + V P PT +P + P ID A+ ++V
Sbjct: 141 HTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDLIDFAITKHVPRN 200
Query: 198 LRSIEAMSELDSDHRPVVMQ-LGRPH---NPVTVTRTMVDWNKLG--TCLADAAPPILPY 359
+ + EA+++L SDH PV + L RPH P +T +W + C L
Sbjct: 201 MVTAEALADLSSDHSPVFLNMLTRPHIVDPPYRLTNFRTNWPRYQKYVCSHIELTTALST 260
Query: 360 GPDSNPSPEDTVESINIITDHISSAIIRSSKEVDVEDSFHRIRLSPDLRNLLRVRNAAIR 539
D + S E T+E+I + S+ + +K ++ + RL D R L R +
Sbjct: 261 KEDIDKSTE-TLENILVSAAKASTPPVTYAKPNYIKTNREIERLVLDKRRLRRDWQSN-- 317
Query: 540 AYDRLPTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAY--WRLARTLKSET 713
+ H +I RRL + L ++ SY+EQL+P+ Y WR R LK+
Sbjct: 318 -RSPITKHMLKIATRRLT----NALKQEEKNSQRSYIEQLSPTSTKYPLWRAHRNLKT-P 371
Query: 714 IATMPPLVRPSG 749
IA + PL PSG
Sbjct: 372 IAPIMPLRSPSG 383
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 69.3 bits (162), Expect = 6e-12
Identities = 69/252 (27%), Positives = 112/252 (44%), Gaps = 10/252 (3%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRLDAFID--DLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLR 197
HT W G++L + + + V P PT +P + P ID A+ ++V
Sbjct: 141 HTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDLIDFAITKHVPRN 200
Query: 198 LRSIEAMSELDSDHRPVVMQLGRPHN----PVTVTRTMVDWNKLG--TCLADAAPPILPY 359
+ + EA+++L SDH PV + + H+ P +T +W + C L
Sbjct: 201 MVTAEALADLSSDHSPVFLNMLTRHHIVDPPYRLTNFRTNWPRYQKYVCSHIELTTALST 260
Query: 360 GPDSNPSPEDTVESINIITDHISSAIIRSSKEVDVEDSFHRIRLSPDLRNLLRVRNAAIR 539
D + S E T+E+I + S+ + +K ++ + RL D R L R + R
Sbjct: 261 KEDIDKSTE-TLENILVSAAKASTPPVTYAKPNYIKTNREIERLVLDKRRL-RWDWQSNR 318
Query: 540 AYDRLPTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAY--WRLARTLKSET 713
+ + H +I RRL + L ++ SY+EQL+P+ Y WR R LK+
Sbjct: 319 S--PITKHMLKIATRRLT----NALKQEEKNSQRSYIEQLSPTSTKYPLWRAHRNLKT-P 371
Query: 714 IATMPPLVRPSG 749
IA + PL PSG
Sbjct: 372 IAPIMPLRSPSG 383
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 64.1 bits (149), Expect = 2e-10
Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 3/230 (1%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLR 203
H W C R N G+ L+ D F I+ P PT P+N + ST+DL L N+ +L
Sbjct: 166 HRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPHNHKAKASTLDLC-LTNIPNQLA 224
Query: 204 SIEAMSELDSDHRPVVMQLGRPHNPVTVTRTMV---DWNKLGTCLADAAPPILPYGPDSN 374
+ M EL SDH PVV++ T ++ +W + + S
Sbjct: 225 NPAVMQELSSDHLPVVIKYSTNFMRNVKTYPILGRANWALFKRIINERLMVEEVVVNCSQ 284
Query: 375 PSPEDTVESINIITDHISSAIIRSSKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRAYDRL 554
S D I T I+ A +++ + S ++ L + L + RN R + R
Sbjct: 285 ISTLDIDNLIGSFTRVINYAFLKAVPHKPIHHS--KLTLPVHITELFKTRNIIQRQWFRS 342
Query: 555 PTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLK 704
+ R L + L N W++ L++L + +W + + +K
Sbjct: 343 RHPLLKSRCDHLNYIIRKELFIYNNAKWNNKLQKLDKCSKPFWNITKAIK 392
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 64.1 bits (149), Expect = 2e-10
Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 3/230 (1%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLR 203
H W C R N G+ L+ D F I+ P PT P+N + ST+DL L N+ +L
Sbjct: 114 HRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPHNHKAKASTLDLC-LTNIPNQLA 172
Query: 204 SIEAMSELDSDHRPVVMQLGRPHNPVTVTRTMV---DWNKLGTCLADAAPPILPYGPDSN 374
+ M EL SDH PVV++ T ++ +W + + S
Sbjct: 173 NPAVMQELSSDHLPVVIKYSTNFMRNVKTYPILGRANWALFKRIINERLMVEEVVVNCSQ 232
Query: 375 PSPEDTVESINIITDHISSAIIRSSKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRAYDRL 554
S D I T I+ A +++ + S ++ L + L + RN R + R
Sbjct: 233 ISTLDIDNLIGSFTRVINYAFLKAVPHKPIHHS--KLTLPVHITELFKTRNIIQRQWFRS 290
Query: 555 PTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLK 704
+ R L + L N W++ L++L + +W + + +K
Sbjct: 291 RHPLLKSRCDHLNYIIRKELFIYNNAKWNNKLQKLDKCSKPFWNITKAIK 340
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 62.9 bits (146), Expect = 5e-10
Identities = 61/269 (22%), Positives = 117/269 (43%), Gaps = 7/269 (2%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLR 203
H W + GR L + +I+ +PT YPY + PS ID A+ + L
Sbjct: 143 HWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHTPSCIDFAVYHGIPDHLA 202
Query: 204 SIEAMSELDSDHRPVVMQLGRPHNPVTVTRTMVDWNKLGTCLADAAPPILPYGPDSNPSP 383
+I +LDSDH P+++ + V + +V + + ++ N S
Sbjct: 203 TITQSWDLDSDHLPLIISIETDSTHVNPSPRLVTKHTDLLAFSRQLESLISLNTTLN-SG 261
Query: 384 EDTVESINIITDHISSAIIRSSKEVDVEDSFHRIRLSPDLRNLL----RVRNAAIRA--- 542
E+ +++ +T+ I A S+ V + + I L+ + R LL R+R AIR+
Sbjct: 262 EEIEMAVDNLTESIHRAAAVSTSPVPRIGTTYGIVLTREARELLTQKRRLRRRAIRSQDP 321
Query: 543 YDRLPTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIAT 722
+DRL + ++R + RE+ S + + + ++ + + W+ ++LK +
Sbjct: 322 WDRLLWNRAAKQLRNVLRELRSNFFEQK----LASMDYTVDAGYSLWKCTKSLKRQPFRQ 377
Query: 723 MPPLVRPSGQPPAFDDXXXLSCWPMHCXT 809
+P +R G A ++ +C+ H T
Sbjct: 378 VP--IRCPGGELAKNEEEQANCFANHLET 404
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 52.0 bits (119), Expect = 1e-06
Identities = 40/164 (24%), Positives = 69/164 (42%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLR 203
H W R+N G L + + + + PT YPY P ID AL + V
Sbjct: 142 HWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRGSPGYIDFALTKGVLGIHA 201
Query: 204 SIEAMSELDSDHRPVVMQLGRPHNPVTVTRTMVDWNKLGTCLADAAPPILPYGPDSNPSP 383
+I A+ EL SDH P+V+ L ++ LP N S
Sbjct: 202 NISAVVELSSDHLPLVITLDAGAISYPKMERLITRRTNLEVFQSQLESTLPLNTAIN-SG 260
Query: 384 EDTVESINIITDHISSAIIRSSKEVDVEDSFHRIRLSPDLRNLL 515
+D ++I ++T++I SA +++ + + + RI + ++ L+
Sbjct: 261 QDVDDAIELLTNNIKSAARLATRSISRQPAADRIPIPREILLLI 304
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 49.6 bits (113), Expect = 5e-06
Identities = 52/249 (20%), Positives = 101/249 (40%), Gaps = 7/249 (2%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLR 203
H W R+ G+ L I ++++ PT Y YN L PS +D + +
Sbjct: 143 HAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYNPLLTPSALDFFITCGYGMGRL 202
Query: 204 SIEAMSELDSDHRPVVMQLG----RPHNPVTVTRTMVDWNKLGTCLADAAPPILPYGPDS 371
++ + EL SDH P++ L + V + D N T L + + ++
Sbjct: 203 DVQTLQELSSDHLPILAVLHATPLKKPQRVRLLAHNADINIFKTHLEQLSEVNMQI-LEA 261
Query: 372 NPSPEDTVESINIITDHISSAIIRSSKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRAYDR 551
T ++ +++ A R+ EV ++F ++L + LLR++ + Y R
Sbjct: 262 VDIDNATSLFMSKLSEAAQLAAPRNRHEV---EAFRPLQLPSSILALLRLKRRVRKEYAR 318
Query: 552 LPTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQL---APSHQAYWRLARTLKSETIAT 722
+ RL +H L+ + ++L+ L A ++ + WR+ + K++
Sbjct: 319 TGDPRMQQIHSRLANCLHKALARRKQAQIDTFLDNLGADASTNYSLWRITKRFKAQP-TP 377
Query: 723 MPPLVRPSG 749
+ PSG
Sbjct: 378 KSAIKNPSG 386
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 48.8 bits (111), Expect = 9e-06
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRL 200
H +W C R G L DA D EIV + T +P++ PS ID ++ + +
Sbjct: 170 HRQWGCIRACQRGAALYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFSICKRLGRYE 229
Query: 201 RSIEAMSELDSDHRPVVMQLGRPHNPVTVTRTMVDWNKLGTCLADAAPPILPYGPDSNPS 380
+ I + + L SDH P+++++ +++ + + K T + + +L N
Sbjct: 230 KRISSSAHLSSDHLPILLEINLDIKTISLQKQNNNILKKTTNI-ELFKNVLERKILLNTE 288
Query: 381 ---PEDTVESINIITDHISSAIIRSSKEVDVEDSFHRIRLSPDLRN 509
ED ++INI +I + S+ + D+ HR R RN
Sbjct: 289 IRVAEDINDAINIFIKNIKDSAAESTPSPRIPDN-HRRRYGQANRN 333
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 47.6 bits (108), Expect = 2e-05
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRL 200
H +W C R G L +A D T EI+ T +P++ PS ID ++ + +
Sbjct: 158 HRQWGCTRACQRGTALYEAVQADSTAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRFE 217
Query: 201 RSIEAMSELDSDHRPVVMQLGRPHN 275
+ I + ++L SDH P+++++ N
Sbjct: 218 KRISSGADLSSDHLPILLEINLDTN 242
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 46.4 bits (105), Expect = 5e-05
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRL 200
H +W C R G L +A D EI+ T +P++ PS ID ++ + +
Sbjct: 158 HRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLE 217
Query: 201 RSIEAMSELDSDHRPVVMQL 260
+ I ++++L SDH P+++++
Sbjct: 218 KRISSVADLSSDHLPILLEI 237
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 45.6 bits (103), Expect = 8e-05
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRL 200
H +W C R G L +A D EI+ T +P++ PS ID ++ + +
Sbjct: 42 HRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLE 101
Query: 201 RSIEAMSELDSDHRPVVMQL 260
+ I + ++L SDH P+++++
Sbjct: 102 KRISSSADLSSDHLPILLEI 121
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 45.6 bits (103), Expect = 8e-05
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRL 200
H +W C R G L +A D EI+ T +P++ PS ID ++ + +
Sbjct: 158 HRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLE 217
Query: 201 RSIEAMSELDSDHRPVVMQL 260
+ I + ++L SDH P+++++
Sbjct: 218 KRISSSADLSSDHLPILLEI 237
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 45.6 bits (103), Expect = 8e-05
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRL 200
H +W C R G L +A D EI+ T +P++ PS ID ++ + +
Sbjct: 120 HRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLE 179
Query: 201 RSIEAMSELDSDHRPVVMQL 260
+ I + ++L SDH P+++++
Sbjct: 180 KRISSSADLSSDHLPILLEI 199
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 45.6 bits (103), Expect = 8e-05
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRL 200
H +W C R G L +A D EI+ T +P++ PS ID ++ + +
Sbjct: 158 HRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLE 217
Query: 201 RSIEAMSELDSDHRPVVMQL 260
+ I + ++L SDH P+++++
Sbjct: 218 KRISSSADLSSDHLPILLEI 237
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 38.3 bits (85), Expect = 0.013
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 18 CHHTRWNCHRTNVNGRRLD-AFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTL 194
C H W + + GR L + + +IV T +P++ +PS +D A+ +
Sbjct: 160 CKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFHT 219
Query: 195 RLRSIEAMSELDSDHRPVVMQL 260
+ + EL SDH P+ + L
Sbjct: 220 QKLKTYSTDELSSDHLPIQIVL 241
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 38.3 bits (85), Expect = 0.013
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 18 CHHTRWNCHRTNVNGRRLD-AFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTL 194
C H W + + GR L + + +IV T +P++ +PS +D A+ +
Sbjct: 160 CKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFHT 219
Query: 195 RLRSIEAMSELDSDHRPVVMQL 260
+ + EL SDH P+ + L
Sbjct: 220 QKLKTYSTDELSSDHLPIQIVL 241
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 38.3 bits (85), Expect = 0.013
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 18 CHHTRWNCHRTNVNGRRLD-AFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTL 194
C H W + + GR L + + +IV T +P++ +PS +D A+ +
Sbjct: 160 CKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFHT 219
Query: 195 RLRSIEAMSELDSDHRPVVMQL 260
+ + EL SDH P+ + L
Sbjct: 220 QKLKTYSTDELSSDHLPIQIVL 241
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 31.5 bits (68), Expect = 1.4
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +3
Query: 24 HTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLR 203
H W TN G+ FID++ ++ +PT + + + IDL L +
Sbjct: 136 HHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFSTHNTY--THIDLTLCSPILAPHA 193
Query: 204 SIEAMSEL-DSDHRPVVMQLGRPHNP 278
+ +++L SDH P++ L NP
Sbjct: 194 KWKILNDLHGSDHFPIITTLFPTTNP 219
>AY118918-1|AAM50778.1| 446|Drosophila melanogaster LD22559p
protein.
Length = 446
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 382 PRTPSNPLTSLPITSLPRSLDLLKKSMWRTAS 477
PR + LT++P+T+L L LL K+ W+T S
Sbjct: 57 PRCRIHELTAVPVTNLTPKLRLLFKAFWQTLS 88
>AE014297-2416|AAF55475.1| 446|Drosophila melanogaster CG18012-PA
protein.
Length = 446
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 382 PRTPSNPLTSLPITSLPRSLDLLKKSMWRTAS 477
PR + LT++P+T+L L LL K+ W+T S
Sbjct: 57 PRCRIHELTAVPVTNLTPKLRLLFKAFWQTLS 88
>AY051480-1|AAK92904.1| 736|Drosophila melanogaster GH14313p
protein.
Length = 736
Score = 30.7 bits (66), Expect = 2.5
Identities = 27/89 (30%), Positives = 40/89 (44%)
Frame = +3
Query: 351 LPYGPDSNPSPEDTVESINIITDHISSAIIRSSKEVDVEDSFHRIRLSPDLRNLLRVRNA 530
+PY N S + S+N H S+ R SK H + L DLRNLL +A
Sbjct: 9 VPYLYLGNFSRKPHYYSVNRTKLHGSAGAARLSKSTSTSSRSHDLVL--DLRNLLSRSSA 66
Query: 531 AIRAYDRLPTHSNRIRMRRLQREVHSRLS 617
+I+ N I RRL +V ++++
Sbjct: 67 SIQGMVERAARLNGILDRRLVDDVLAKVT 95
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 30.7 bits (66), Expect = 2.5
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +3
Query: 33 WNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIE 212
W RTN G++++ I + + ++ +PT + + ID++L+ + S
Sbjct: 143 WGSPRTNTRGKKIETVILENSLIVLNDGSPTHLSTHNTF--THIDISLISPQIAHMCSWS 200
Query: 213 AMSEL-DSDHRPVVMQLGRPHNP 278
L SDH P+ + + P P
Sbjct: 201 ISDNLHGSDHFPITIHINTPTRP 223
>AE013599-3496|AAM71132.2| 736|Drosophila melanogaster CG3499-PB
protein.
Length = 736
Score = 30.7 bits (66), Expect = 2.5
Identities = 27/89 (30%), Positives = 40/89 (44%)
Frame = +3
Query: 351 LPYGPDSNPSPEDTVESINIITDHISSAIIRSSKEVDVEDSFHRIRLSPDLRNLLRVRNA 530
+PY N S + S+N H S+ R SK H + L DLRNLL +A
Sbjct: 9 VPYLYLGNFSRKPHYYSVNRTKLHGSAGAARLSKSTSTSSRSHDLVL--DLRNLLSRSSA 66
Query: 531 AIRAYDRLPTHSNRIRMRRLQREVHSRLS 617
+I+ N I RRL +V ++++
Sbjct: 67 SIQGMVERAARLNGILDRRLVDDVLAKVT 95
>L20894-1|AAA76834.1| 1767|Drosophila melanogaster receptor protein
tyrosine phosphataseprotein.
Length = 1767
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +1
Query: 202 VPSKQCQSSTQTTDLSLCSSVALTTQSLLRGPWWIGISWARA*PTPLRQSSLTARIRIHP 381
VP ++ S QT SSV T + L W+ +++ A T S + R+R P
Sbjct: 310 VPGREYNISVQTVSEDETSSVPTTARYLTYRSAWLNVTFDEAYTT-----SSSFRVRWEP 364
Query: 382 PRTPS 396
PRT S
Sbjct: 365 PRTYS 369
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 29.9 bits (64), Expect = 4.4
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 349 SSLTARIRIHPPRTPSNPLTSLPITSLPRSLDLLKKSMWRTA---STASDCP 495
++ T+R PR+ + P TS P T+ PRS S T ST + CP
Sbjct: 1109 TTTTSRPTTTTPRSTTTPCTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPCP 1160
Score = 29.5 bits (63), Expect = 5.8
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Frame = +1
Query: 193 CACVPSKQCQSSTQTTDLSLCSSVA--LTTQSLLRGPWWIG----ISWARA*PTPLRQSS 354
C C P+ ST TT S ++ TT + GP + + PT S
Sbjct: 455 CTCSPTTTTPRSTTTTSTSRPTTTTPRSTTTTSTSGPTTTTPRSTTTTTTSGPTTTTPRS 514
Query: 355 LTARIRIHP----PRTPSNPLTSLPITSLPRS 438
T P PR+ + P TS P T+ PRS
Sbjct: 515 TTTTCTCSPTTTTPRSTTTPSTSRPTTTTPRS 546
Score = 29.1 bits (62), Expect = 7.7
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = +1
Query: 382 PRTPSNPLTSLPITSLPRSLDLLKKSMWRTASTASDCPPILGIS*ELGTRQSGPTIVFPR 561
PR+ + TS P T+ PRS T +T + CP T SGPT PR
Sbjct: 944 PRSTTTTCTSCPTTTTPRS----------TTTTCTSCPTTTTPRSTTTTCTSGPTTTTPR 993
Query: 562 IQT 570
T
Sbjct: 994 STT 996
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,095,619
Number of Sequences: 53049
Number of extensions: 928287
Number of successful extensions: 3009
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2976
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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