Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_L21
(821 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92796-4|CAB63231.1| 516|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical pr... 31 0.75
AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein. 31 0.75
Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical p... 31 1.3
Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical p... 31 1.3
Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type chlo... 31 1.3
AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride ... 31 1.3
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 29 3.0
U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter... 29 4.0
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 29 5.3
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 29 5.3
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 29 5.3
Z78014-2|CAB01429.1| 122|Caenorhabditis elegans Hypothetical pr... 28 9.3
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 28 9.3
>Z92796-4|CAB63231.1| 516|Caenorhabditis elegans Hypothetical
protein H25K10.5 protein.
Length = 516
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 221 RARLRPPTCRYAARSPSQPSHCYEDHGGLE*AG 319
R L+ TCRY + P QP++C GGL G
Sbjct: 195 RGNLKDCTCRYNSSEPQQPTNCKALKGGLNITG 227
>Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical
protein F11C3.2 protein.
Length = 598
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/64 (28%), Positives = 23/64 (35%)
Frame = +1
Query: 316 WARA*PTPLRQSSLTARIRIHPPRTPSNPLTSLPITSLPRSLDLLKKSMWRTASTASDCP 495
WA P P R L + PP TP T PI +P ++ W S
Sbjct: 219 WAPGMPKPGRTRKLPRYSTVRPPPTPKRKTTQSPIHVVPTEKNITMDD-WNAEMNISTPK 277
Query: 496 PILG 507
P +G
Sbjct: 278 PYMG 281
>AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein.
Length = 598
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/64 (28%), Positives = 23/64 (35%)
Frame = +1
Query: 316 WARA*PTPLRQSSLTARIRIHPPRTPSNPLTSLPITSLPRSLDLLKKSMWRTASTASDCP 495
WA P P R L + PP TP T PI +P ++ W S
Sbjct: 219 WAPGMPKPGRTRKLPRYSTVRPPPTPKRKTTQSPIHVVPTEKNITMDD-WNAEMNISTPK 277
Query: 496 PILG 507
P +G
Sbjct: 278 PYMG 281
>Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +3
Query: 393 VESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRAYDRLPTHS 566
+ S I+TDH + ++ S + + + H + D RN+ R+ + I ++ + S
Sbjct: 576 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI--FNTIRRTS 633
Query: 567 NRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIATMPPLVRPS 746
R+ R R +S S R ++ APS Q + RT+ T+ ++ PL P+
Sbjct: 634 MRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLSISPLHCPN 691
Query: 747 GQP 755
P
Sbjct: 692 NIP 694
>Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +3
Query: 393 VESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRAYDRLPTHS 566
+ S I+TDH + ++ S + + + H + D RN+ R+ + I ++ + S
Sbjct: 607 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI--FNTIRRTS 664
Query: 567 NRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIATMPPLVRPS 746
R+ R R +S S R ++ APS Q + RT+ T+ ++ PL P+
Sbjct: 665 MRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLSISPLHCPN 722
Query: 747 GQP 755
P
Sbjct: 723 NIP 725
>Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +3
Query: 393 VESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRAYDRLPTHS 566
+ S I+TDH + ++ S + + + H + D RN+ R+ + I ++ + S
Sbjct: 612 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI--FNTIRRTS 669
Query: 567 NRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIATMPPLVRPS 746
R+ R R +S S R ++ APS Q + RT+ T+ ++ PL P+
Sbjct: 670 MRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLSISPLHCPN 727
Query: 747 GQP 755
P
Sbjct: 728 NIP 730
>Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +3
Query: 393 VESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRAYDRLPTHS 566
+ S I+TDH + ++ S + + + H + D RN+ R+ + I ++ + S
Sbjct: 576 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI--FNTIRRTS 633
Query: 567 NRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIATMPPLVRPS 746
R+ R R +S S R ++ APS Q + RT+ T+ ++ PL P+
Sbjct: 634 MRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLSISPLHCPN 691
Query: 747 GQP 755
P
Sbjct: 692 NIP 694
>Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +3
Query: 393 VESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRAYDRLPTHS 566
+ S I+TDH + ++ S + + + H + D RN+ R+ + I ++ + S
Sbjct: 607 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI--FNTIRRTS 664
Query: 567 NRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIATMPPLVRPS 746
R+ R R +S S R ++ APS Q + RT+ T+ ++ PL P+
Sbjct: 665 MRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLSISPLHCPN 722
Query: 747 GQP 755
P
Sbjct: 723 NIP 725
>Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +3
Query: 393 VESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRAYDRLPTHS 566
+ S I+TDH + ++ S + + + H + D RN+ R+ + I ++ + S
Sbjct: 612 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI--FNTIRRTS 669
Query: 567 NRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIATMPPLVRPS 746
R+ R R +S S R ++ APS Q + RT+ T+ ++ PL P+
Sbjct: 670 MRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLSISPLHCPN 727
Query: 747 GQP 755
P
Sbjct: 728 NIP 730
>AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type
chloride channel CLH-2b protein.
Length = 880
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +3
Query: 393 VESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRAYDRLPTHS 566
+ S I+TDH + ++ S + + + H + D RN+ R+ + I ++ + S
Sbjct: 612 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI--FNTIRRTS 669
Query: 567 NRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIATMPPLVRPS 746
R+ R R +S S R ++ APS Q + RT+ T+ ++ PL P+
Sbjct: 670 MRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLSISPLHCPN 727
Query: 747 GQP 755
P
Sbjct: 728 NIP 730
>AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 844
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +3
Query: 393 VESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRAYDRLPTHS 566
+ S I+TDH + ++ S + + + H + D RN+ R+ + I ++ + S
Sbjct: 576 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI--FNTIRRTS 633
Query: 567 NRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIATMPPLVRPS 746
R+ R R +S S R ++ APS Q + RT+ T+ ++ PL P+
Sbjct: 634 MRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLSISPLHCPN 691
Query: 747 GQP 755
P
Sbjct: 692 NIP 694
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 391 PSNPLTSLPITSLPRSLDLLKKSMWRTASTASDCPP 498
PS PL SLP P SL +L + +T+ T + C P
Sbjct: 205 PSCPLPSLPPPDSPSSLVVLPAAAGKTSVTIAPCNP 240
>U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 17 protein.
Length = 352
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +2
Query: 266 PSQPSHCYEDHGGLE*A--GHVPSRRRSANPPLRPGFESIP 382
PS PS HGG GH P S+N P PG +P
Sbjct: 79 PSGPSGPSGPHGGFPGGPQGHFPGNTGSSNTPTLPGVIGVP 119
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 205 PSKQCQSSTQTTDLSLCSSVALTTQSLLRG 294
P+KQC SS T + C A TQ ++ G
Sbjct: 211 PAKQCASSCNTQCTNACQQTAQATQQVIYG 240
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 205 PSKQCQSSTQTTDLSLCSSVALTTQSLLRG 294
P+KQC SS T + C A TQ ++ G
Sbjct: 211 PAKQCASSCNTQCTNACQQTAQATQQVIYG 240
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 331 PTPLRQSSLTARIRIHPPRTPSNPLTSLPITS 426
PTP+++ PP+TPS+PL + I S
Sbjct: 633 PTPIKEEPSAPYSDFCPPQTPSSPLPRIRIVS 664
>Z78014-2|CAB01429.1| 122|Caenorhabditis elegans Hypothetical
protein F42E8.2 protein.
Length = 122
Score = 27.9 bits (59), Expect = 9.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 18 CHHTRWNCHRTNV 56
C H+ WNCH +NV
Sbjct: 99 CSHSCWNCHHSNV 111
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 387 PRGMDSNPGRKGGLAERRRLGTCPAYSNP 301
PRG+ PG KG ER LG P + P
Sbjct: 118 PRGLPGTPGSKGDRGERGPLGP-PGFPGP 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,418,928
Number of Sequences: 27780
Number of extensions: 432502
Number of successful extensions: 1469
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1469
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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