Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_L15
(838 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0920 - 9065573-9065680,9066330-9066566,9066671-9066844,906... 173 2e-43
02_05_0447 + 29096853-29097033,29097812-29098146,29098651-290987... 81 8e-16
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416... 32 0.65
01_06_0116 - 26595570-26596607,26596964-26598353,26599386-265999... 32 0.65
03_05_0019 + 19862171-19863049 31 1.5
09_04_0411 + 17366559-17367497 30 2.0
12_02_0674 - 21745321-21746223,21746229-21747608 30 2.6
04_01_0622 - 8175226-8175312,8175674-8175763,8176370-8176457,817... 29 4.6
03_05_0492 - 24874517-24874960,24875672-24875815,24876214-248762... 29 6.1
03_04_0034 + 16679624-16679940,16679980-16680199,16680319-166806... 29 6.1
03_02_0872 - 11983151-11983432,11983488-11983598,11983744-119840... 28 8.0
01_01_0326 - 2642408-2643607 28 8.0
>08_01_0920 -
9065573-9065680,9066330-9066566,9066671-9066844,
9067527-9067666,9069046-9069478
Length = 363
Score = 173 bits (420), Expect = 2e-43
Identities = 93/208 (44%), Positives = 132/208 (63%), Gaps = 7/208 (3%)
Frame = +3
Query: 150 NILTVDTFNKETLNDTFNLAQFMKT----SVNKGRYLDDILRGKVMASIFYEVSTRTSCS 317
+++ F+++ L + F +A+ M+ S ++G +L G +MA++FYE STRT S
Sbjct: 54 DVIEAQQFDRDALTEIFEVAREMEALERGSSSRGAGRSRVLEGYLMATLFYEPSTRTRLS 113
Query: 318 FAAAMHRLGGSVVHTDATS--SSAKKGESLEDSVAIMASYSDVVVLRHPEPGAVSRASKL 491
F AAM RLGG V+ T+ SSA KGE+LED++ + YSD++VLRH E GA RA+
Sbjct: 114 FEAAMRRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVLRHFESGAARRAAAT 173
Query: 492 SRKPVINAGDGVGEHPTQALLDVFTIREEIGTVNGLTITMVGDLKNGRTVHSLA-RXXXX 668
+ PVINAGDG G+HPTQALLDV++I EIGT++G+ + +VGDL NGRTV SLA
Sbjct: 174 ADIPVINAGDGPGQHPTQALLDVYSIEREIGTLDGIKLGLVGDLANGRTVRSLAYLIAKY 233
Query: 669 XXXXXXXXSPPGLXMPKHITDYVASKGI 752
SP + M I +Y+ S+G+
Sbjct: 234 QNIKIYFVSPDVVKMKDDIKEYLTSQGV 261
>02_05_0447 +
29096853-29097033,29097812-29098146,29098651-29098782,
29098870-29099142,29099295-29099477
Length = 367
Score = 81.4 bits (192), Expect = 8e-16
Identities = 56/201 (27%), Positives = 82/201 (40%)
Frame = +3
Query: 147 KNILTVDTFNKETLNDTFNLAQFMKTSVNKGRYLDDILRGKVMASIFYEVSTRTSCSFAA 326
K+ L +D F+K+T+ N A +K + G +GK MA IF + S RT SF
Sbjct: 66 KDFLHIDDFDKDTIMKILNRAIEVKAMIKSGDRSFQPFKGKSMAMIFAKPSMRTRVSFET 125
Query: 327 AMHRLGGSVVHTDATSSSAKKGESLEDSVAIMASYSDVVVLRHPEPGAVSRASKLSRKPV 506
LGG ++ K E D +++ Y+D+++ R + +K + PV
Sbjct: 126 GFFLLGGHAIYLGPDDIQMGKREETRDVARVLSGYNDIIMARVFAHQDILDLAKYAAVPV 185
Query: 507 INAGDGVGEHPTQALLDVFTIREEIGTVNGLTITMVGDLKNGRTVHSLARXXXXXXXXXX 686
IN G HP Q + D T+ E IG + + VGD N VHS R
Sbjct: 186 IN-GLTDYNHPCQIMADALTMLEHIGRIENTKVVYVGDGNN--IVHSWLRLAALFPLHFV 242
Query: 687 XXSPPGLXMPKHITDYVASKG 749
P G + S G
Sbjct: 243 CACPKGFEPDAKTVEIARSAG 263
>12_02_1128 -
26341118-26341204,26341302-26341441,26341567-26341663,
26341755-26341830,26341919-26342118,26342199-26342297,
26342395-26342479,26342786-26343024,26343233-26343403,
26343605-26343848,26343980-26344253,26344755-26344934,
26345342-26345423,26346209-26346278,26346802-26346901,
26347003-26347097,26347181-26347317,26347342-26347420,
26347591-26347651,26348580-26349009
Length = 981
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -1
Query: 619 SPTIVIVRPFTVPISSRIVKTSNNACVGCSPTPSPAFITGLRLSFDARETAPGSGCLNTT 440
+PT + PI++ + + +A V P P+P + T + + + +E PG C +T
Sbjct: 41 TPTAMGAGGGAAPIAAAAIAAAASAAVVAGPRPAPGY-TVVNAAMEKKEDGPGCRCGHTL 99
Query: 439 TS 434
T+
Sbjct: 100 TA 101
>01_06_0116 -
26595570-26596607,26596964-26598353,26599386-26599923,
26600562-26601453
Length = 1285
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 333 HRLGGSVVHTDATSSSAKKGESLEDSVAIMASYSDVVVLRHPEPGAVSRASKLSRKPVIN 512
HR GGSV +++ A G + A V R PEP R S K V++
Sbjct: 15 HRRGGSVERSESEGDEAGGGAGAREEAAAAR------VSRDPEP---ERRRSSSGKEVVS 65
Query: 513 AGDGVGEH 536
+G+G EH
Sbjct: 66 SGNGYAEH 73
>03_05_0019 + 19862171-19863049
Length = 292
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +3
Query: 351 VVHTDATSSSAKKGESLEDSVAIMASYSDVVVLRHPEPGAVSRASKLSRKPVINAGDGVG 530
+VH D +S+A G + ++ + DV+ RHP PGA + A+ + P + A D
Sbjct: 106 LVHPDKNTSAAADG-----AFKLVQTAWDVLSTRHPPPGATAAAASVCTLP-MRAEDLFR 159
Query: 531 EHPTQA 548
PT A
Sbjct: 160 TKPTAA 165
>09_04_0411 + 17366559-17367497
Length = 312
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +3
Query: 342 GGSVVHTDATSSSAKKGESLEDSVAIMASYSDVVVLRHPEPGAVSRASKLSRKPVINAGD 521
GG++VH +S+ KG +E ++ + + + AV + SKL A +
Sbjct: 161 GGNIVHEMLLRASSNKGPRIEGAIVLHPFFGGSTAIDGESDDAVPKGSKLWAVACPGAAN 220
Query: 522 GVGE 533
GV +
Sbjct: 221 GVDD 224
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = -1
Query: 595 PFTVPISSRIVKTSNNACVGCSPTPSPAFITGLR---LSFDARE--TAPGSGCLNTTTSE 431
P T P+SS +K A G TP+ T R LS + TAPG+ L+TTTS+
Sbjct: 608 PSTSPLSSSTIKIPTTARTGELSTPTDKIPTTTRAGDLSTATSKIPTAPGTSELSTTTSK 667
>04_01_0622 -
8175226-8175312,8175674-8175763,8176370-8176457,
8177021-8177095,8177754-8177821,8177898-8177955,
8178862-8178942,8179968-8180038,8180144-8180225,
8182327-8182449,8183023-8183129,8183201-8183263,
8183877-8183936,8184100-8184151,8185566-8185598,
8185820-8185871,8185965-8186028,8186693-8186749,
8186962-8187006,8187083-8187190,8188147-8188212,
8188382-8188492,8190841-8191035,8191419-8191499,
8191591-8191630,8191764-8191816
Length = 669
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 396 IRLFLQKSLLHRYVPQIRLVYAWPLQ-NCSSYVY 298
+ L LQ SLL Y ++RL+ A PLQ C+ +Y
Sbjct: 48 LSLILQTSLLKEYGAELRLLSAEPLQTECAKILY 81
>03_05_0492 -
24874517-24874960,24875672-24875815,24876214-24876282,
24876452-24876570,24878292-24878580
Length = 354
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +3
Query: 342 GGSVVHTDATSSSAKKGESLEDSVAIMASYSDVVVLRHPEPGAVSRASKLSRKPVINAGD 521
GG ++T +++A G S + +A + S +DV H PG+ RAS LS V + G
Sbjct: 226 GGRFLNTKKEATAAGCGGSSKTPLASLVSPADVA---H-RPGSGGRASSLSGSDVSSPGG 281
Query: 522 GVGEH 536
+ +H
Sbjct: 282 VMYDH 286
>03_04_0034 +
16679624-16679940,16679980-16680199,16680319-16680624,
16680703-16681044,16681066-16681257,16681533-16681684,
16681803-16681974,16682017-16682338,16682414-16682862
Length = 823
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 72 RCDSSSNYNPPQPSITQRQRSDLF 143
RCD NY PPQ S Q + ++F
Sbjct: 779 RCDRDENYVPPQASADQPKTEEVF 802
>03_02_0872 -
11983151-11983432,11983488-11983598,11983744-11984007,
11984038-11984163,11984257-11984481,11984757-11985311,
11985390-11985695,11985815-11986369
Length = 807
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 72 RCDSSSNYNPPQPSITQRQRSDLF 143
RCD NY PPQ S Q + ++F
Sbjct: 763 RCDCDENYVPPQASDDQPETEEVF 786
>01_01_0326 - 2642408-2643607
Length = 399
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -1
Query: 595 PFTVPISSRIVKTSNNACVGCSPTPSPAFITGLRLSFDARETAPGSGCLNTTT 437
P VPI R+ + S C+ +P P ++I G+ + AP + +T T
Sbjct: 74 PAPVPIPRRLARISAKFCMSFAPVPVRSWIVGVGGDSADEDYAPETIVFDTET 126
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,716,980
Number of Sequences: 37544
Number of extensions: 419056
Number of successful extensions: 968
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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