Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_L15
(838 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr... 237 5e-63
AF038614-7|AAB92060.2| 664|Caenorhabditis elegans Hypothetical ... 33 0.33
Z14092-2|CAA78469.2| 307|Caenorhabditis elegans Hypothetical pr... 31 0.77
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 31 0.77
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 30 2.3
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 30 2.3
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 28 7.2
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 28 7.2
>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical protein
D2085.1 protein.
Length = 2198
Score = 237 bits (581), Expect = 5e-63
Identities = 120/235 (51%), Positives = 154/235 (65%), Gaps = 2/235 (0%)
Frame = +3
Query: 48 PPQTVTRQRCDSSSNYNPPQPSITQRQRSDLFGKNILTVDTFNKETLNDTFNLAQFMKTS 227
P Q + + S + PP+ +L KN ++V +K +N F LA K
Sbjct: 1844 PQQMIESSSDEQSPLHTPPRAHTPIAFPGELLAKNCISVKHLDKGQINRIFELADRYKHD 1903
Query: 228 VNKGRYLDDILRGKVMASIFYEVSTRTSCSFAAAMHRLGGSVVHTDATSSSAKKGESLED 407
V KG L IL GKV+ ++FYEVSTRTSCSF+AAM RLGGSV+ D+ SSS +KGE+LED
Sbjct: 1904 VEKGHPLTHILNGKVLVNLFYEVSTRTSCSFSAAMQRLGGSVISVDSQSSSVQKGETLED 1963
Query: 408 SVAIMASYSDVVVLRHPEPGAVSRASKLSRKPVINAGDGVGEHPTQALLDVFTIREEIGT 587
+V ++ SY D++VLR E GA RA+++ +PVIN GDG GEHPTQALLDV+TIR+E+GT
Sbjct: 1964 TVQVLGSYGDILVLRSNENGAADRAARVCDQPVINGGDGTGEHPTQALLDVYTIRQEMGT 2023
Query: 588 VNGLTITMVGDLKNGRTVHSLARXXXXXXXXXXXXSPPG--LXMPKHITDYVASK 746
VNGLTI +VGDLKNGRTVHSLA+ P L MP+ + DYV+SK
Sbjct: 2024 VNGLTIALVGDLKNGRTVHSLAKLLCLYKDITLHYVAPSTELEMPQEVLDYVSSK 2078
>AF038614-7|AAB92060.2| 664|Caenorhabditis elegans Hypothetical
protein F15E6.9 protein.
Length = 664
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 198 FNLAQFMKTSVNKGR--YLDDILRGKVMASIFYEVSTRTS 311
FN+ F+ VN+ R YL ++RG+ AS F E S RTS
Sbjct: 166 FNVTHFIDGPVNRERAKYLTTMVRGEAPASKFIEYSVRTS 205
>Z14092-2|CAA78469.2| 307|Caenorhabditis elegans Hypothetical
protein R107.2 protein.
Length = 307
Score = 31.5 bits (68), Expect = 0.77
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Frame = +3
Query: 339 LGGSVVHTDA----TSSSAKKGESL------EDSVAIMASYSDVVVLRHPEPGAVSRASK 488
+GGS+ +T A SS+++ G L D+ ++ YS +++ HP A S K
Sbjct: 26 IGGSLEYTGAPYFAASSASRLGADLIHIFCDPDAAQVIKGYSPDLIV-HPGMTANSIIPK 84
Query: 489 LSRKPVINAGDGVGEHP 539
LSR I G G+G +P
Sbjct: 85 LSRMDAIVIGPGLGRNP 101
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 31.5 bits (68), Expect = 0.77
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -3
Query: 638 CASIFKIANHCDREAIYCTDFFSYRKNV*QCLRGVFTNTVSRIYYGLATKFRCARNCAG 462
C + F+I N+C + T +F YRK +C R +N + A + +CA C G
Sbjct: 228 CGTPFEIKNNCRKPEPVNTWWFDYRKG--ECKRAEHSNCEEH-FNSFANQEQCADYCVG 283
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 351 VVHTDATSSSAKKGESLEDSVAIMASYSDVVVLRHPEPGAVSRASKLSRKPVI-NAGDGV 527
++ T A+S + + SL ++ D VV+ H PG + + ++KP++ ++ + +
Sbjct: 305 LIDTGASSDTERLLHSLAKE-SVTLDQIDSVVITHASPGHMGNMNFFAQKPILYHSMEYI 363
Query: 528 GEHPTQALLDVFTIREEIGTV 590
G H T L R+ G V
Sbjct: 364 GRHVTPTELKERPYRKLSGNV 384
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 351 VVHTDATSSSAKKGESLEDSVAIMASYSDVVVLRHPEPGAVSRASKLSRKPVI-NAGDGV 527
++ T A+S + + SL ++ D VV+ H PG + + ++KP++ ++ + +
Sbjct: 248 LIDTGASSDTERLLHSLAKE-SVTLDQIDSVVITHASPGHMGNMNFFAQKPILYHSMEYI 306
Query: 528 GEHPTQALLDVFTIREEIGTV 590
G H T L R+ G V
Sbjct: 307 GRHVTPTELKERPYRKLSGNV 327
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 339 LGGSVVHTDATSSSAKKGESLEDSVAIMASY 431
+ S+ HTD SSA G S D+ M +Y
Sbjct: 1844 ISSSIAHTDVAVSSAHPGSSFADAQTRMTAY 1874
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 339 LGGSVVHTDATSSSAKKGESLEDSVAIMASY 431
+ S+ HTD SSA G S D+ M +Y
Sbjct: 1844 ISSSIAHTDVAVSSAHPGSSFADAQTRMTAY 1874
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,554,139
Number of Sequences: 27780
Number of extensions: 358822
Number of successful extensions: 912
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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