Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_L05
(810 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 119 5e-27
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 119 5e-27
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 97 3e-20
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 89 9e-18
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 83 4e-16
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 82 1e-15
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 81 2e-15
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 79 7e-15
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 79 7e-15
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 66 4e-11
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 62 9e-10
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 60 4e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 60 4e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 60 4e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 60 4e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 60 4e-09
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 56 4e-08
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 56 4e-08
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 56 4e-08
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 56 4e-08
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 43 4e-04
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 40 0.005
AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p pro... 35 0.15
AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-P... 35 0.15
BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p pro... 32 1.1
BT004847-1|AAO45203.1| 955|Drosophila melanogaster RE70412p pro... 31 1.4
AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p pro... 31 1.4
AE014298-2109|AAF48429.2| 955|Drosophila melanogaster CG9095-PA... 31 1.4
AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA... 31 1.4
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 31 1.9
BT010037-1|AAQ22506.1| 409|Drosophila melanogaster LD43171p pro... 31 2.5
AE014298-2534|AAN09435.1| 409|Drosophila melanogaster CG32564-P... 31 2.5
AY128472-1|AAM75065.1| 836|Drosophila melanogaster RE28238p pro... 30 3.3
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 30 3.3
AE014134-2320|AAN10833.1| 836|Drosophila melanogaster CG6043-PC... 30 3.3
AE014134-2318|AAN10831.1| 759|Drosophila melanogaster CG6043-PB... 30 3.3
AE014134-2317|AAF53274.2| 759|Drosophila melanogaster CG6043-PA... 30 3.3
AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD... 30 3.3
AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-P... 29 7.5
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 29 9.9
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 119 bits (286), Expect = 5e-27
Identities = 63/238 (26%), Positives = 119/238 (50%)
Frame = +3
Query: 9 LVLIIRDYLSNRSFRYRVEGTXXXXXXXXXXXXXXXXXXXXYYSVCISTIYSGLRXTHLA 188
L+ I++++L++R F + + +++ I L+
Sbjct: 635 LIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCV-LS 693
Query: 189 LFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTL 368
LFADD A+Y + + +++ +Q+ + +++KW+I INP K+ A+ F + R P
Sbjct: 694 LFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRY-- 751
Query: 369 SIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFIL 548
LP R++ + D PI W ++YLG+ D ++TF+ HI + I+
Sbjct: 752 ---LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKII 798
Query: 549 GRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCRI 722
LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ + H+K QI Q++ ++
Sbjct: 799 CTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 856
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 119 bits (286), Expect = 5e-27
Identities = 63/238 (26%), Positives = 119/238 (50%)
Frame = +3
Query: 9 LVLIIRDYLSNRSFRYRVEGTXXXXXXXXXXXXXXXXXXXXYYSVCISTIYSGLRXTHLA 188
L+ I++++L++R F + + +++ I L+
Sbjct: 583 LIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCV-LS 641
Query: 189 LFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTL 368
LFADD A+Y + + +++ +Q+ + +++KW+I INP K+ A+ F + R P
Sbjct: 642 LFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRY-- 699
Query: 369 SIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFIL 548
LP R++ + D PI W ++YLG+ D ++TF+ HI + I+
Sbjct: 700 ---LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKII 746
Query: 549 GRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCRI 722
LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ + H+K QI Q++ ++
Sbjct: 747 CTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 804
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 97.1 bits (231), Expect = 3e-20
Identities = 61/185 (32%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Frame = +3
Query: 183 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF--KRGRPP 356
LA FADD + Y R + +Q A +W R+W I IN +KS V F KR PP
Sbjct: 671 LATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKRRTPP 730
Query: 357 NTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 536
P+ + + P+P KYLGV LD R+TF H+ +R R
Sbjct: 731 ---------------------PVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRL 769
Query: 537 AFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFC 716
+ + Y ++ RSK+SL NK+T+YK + P Y ++ A H+K Q IQ++
Sbjct: 770 RAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVA 829
Query: 717 RIXVG 731
R+ G
Sbjct: 830 RLITG 834
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 88.6 bits (210), Expect = 9e-18
Identities = 68/241 (28%), Positives = 105/241 (43%), Gaps = 7/241 (2%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVEGTXXXXXXXXXXXXXXXXXXXXYYSV------CISTIY-SGLRX 176
+++ YL +R F RV + YSV C + + + R
Sbjct: 613 VLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRK 672
Query: 177 THLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPP 356
LA +ADD A+ YS R LQ TT+ W ++W + +NP K+ F
Sbjct: 673 ALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCF------ 726
Query: 357 NTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 536
TL P AP + DQP + KYLG+TLD R+TF PH+K R
Sbjct: 727 --TLKTLSPV-----TAPIELEGVILDQP----SQAKYLGITLDKRLTFGPHLKATTRRC 775
Query: 537 AFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFC 716
+ +L ++ R+S M+LR K +Y C+ P+ Y ++ A + + Q++Q+R
Sbjct: 776 YQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAM 835
Query: 717 R 719
R
Sbjct: 836 R 836
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 83.0 bits (196), Expect = 4e-16
Identities = 66/239 (27%), Positives = 104/239 (43%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVEGTXXXXXXXXXXXXXXXXXXXXYYSVCISTIYSGLRXTHLALFA 197
+++ YL +R F R Y + + I + R T ++ FA
Sbjct: 610 LLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRLT-VSTFA 668
Query: 198 DDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIP 377
DDTAI R +L + +W WRI +N K V F TL+
Sbjct: 669 DDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTF--------TLN-- 718
Query: 378 LPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRL 557
R + P P+ + P+P A +V YLGV LD R+T+R HI+ + + L
Sbjct: 719 ----RQDCP-----PLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNL 769
Query: 558 YPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCRIXVGA 734
+ +I S +SL +KV LY + ++P+ TY S ++ +A ++ Q QS+ R GA
Sbjct: 770 HWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGA 828
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 81.8 bits (193), Expect = 1e-15
Identities = 68/239 (28%), Positives = 101/239 (42%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVEGTXXXXXXXXXXXXXXXXXXXXYYSVCISTIYSGLRXTHLALFA 197
+++ YL NR F R + + Y++ + T + FA
Sbjct: 608 LLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLT-TSTFA 666
Query: 198 DDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIP 377
DDTAI + L T++ +W WRI IN K V F TL+
Sbjct: 667 DDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF--------TLN-- 716
Query: 378 LPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRL 557
P P+ + + IP A +V YLGV LD R+T+R HI+ L
Sbjct: 717 ------KQTCP---PLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNL 767
Query: 558 YPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCRIXVGA 734
+ +I RS +SL K LY + ++P+ TY S ++ +A R ++ Q QSR RI GA
Sbjct: 768 HWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 80.6 bits (190), Expect = 2e-15
Identities = 60/181 (33%), Positives = 84/181 (46%)
Frame = +3
Query: 192 FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 371
FADDTAI + L T++ +W WRI IN K V F TL+
Sbjct: 665 FADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF--------TLN 716
Query: 372 IPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILG 551
P P+ + + IP A +V YLGV LD R+T+R HI+
Sbjct: 717 --------KQTCP---PLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKAR 765
Query: 552 RLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCRIXVG 731
L+ +I RS +SL K LY + ++P+ TY S ++ +A R ++ Q QSR RI G
Sbjct: 766 NLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITG 825
Query: 732 A 734
A
Sbjct: 826 A 826
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 79.0 bits (186), Expect = 7e-15
Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 7/250 (2%)
Frame = +3
Query: 6 RLVLIIRDYLSNRSFRYRVEGTXXXXXXXXXXXXXXXXXXXXYYSVCISTIYSGLRXTH- 182
+L L+++ +L R+F V+G YSV S + + T
Sbjct: 610 QLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEV 669
Query: 183 ------LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKR 344
+A +ADDTA+ + LQ QW W + IN K V F
Sbjct: 670 DEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFA- 728
Query: 345 GRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTV 524
N T S P +++ + I KYLG+TLD ++TF HI +
Sbjct: 729 ----NRTGSCP--------------GVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNI 770
Query: 525 RDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQ 704
+ + R+ +I R+K+SL KV +YK+ + P + Y V+ A + HL +I+Q
Sbjct: 771 QQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQ 830
Query: 705 SRFCRIXVGA 734
++ R GA
Sbjct: 831 AKTLRRISGA 840
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 79.0 bits (186), Expect = 7e-15
Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 7/250 (2%)
Frame = +3
Query: 6 RLVLIIRDYLSNRSFRYRVEGTXXXXXXXXXXXXXXXXXXXXYYSVCISTIYSGLRXTH- 182
+L L+++ +L R+F V+G YSV S + + T
Sbjct: 412 QLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEV 471
Query: 183 ------LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKR 344
+A +ADDTA+ + LQ QW W + IN K V F
Sbjct: 472 DEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFA- 530
Query: 345 GRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTV 524
N T S P +++ + I KYLG+TLD ++TF HI +
Sbjct: 531 ----NRTGSCP--------------GVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNI 572
Query: 525 RDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQ 704
+ + R+ +I R+K+SL KV +YK+ + P + Y V+ A + HL +I+Q
Sbjct: 573 QQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQ 632
Query: 705 SRFCRIXVGA 734
++ R GA
Sbjct: 633 AKTLRRISGA 642
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 66.5 bits (155), Expect = 4e-11
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 8/223 (3%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTXXXXXXXXXXXXXXXXXXXXYYSVCIST-----IY- 161
+ L +I+ YL+NR+F + + G YS+ S IY
Sbjct: 664 YNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYR 723
Query: 162 -SGLRXTHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 338
S + L+ +ADDT + S R + T W KW I +N K+ V+F
Sbjct: 724 PSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIF 783
Query: 339 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIK 518
TL LPT +N + + Q I K YLGVTLDS++T H+
Sbjct: 784 --------TLKNDLPTNSMN--------VKIKGQTIKKESKQSYLGVTLDSKLTLSSHVT 827
Query: 519 TVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 647
+ + + +L ++ RSK+ + K+ + K+ + P+ YA
Sbjct: 828 KLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYA 870
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 62.1 bits (144), Expect = 9e-10
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 8/223 (3%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTXXXXXXXXXXXXXXXXXXXXYYSVCIST-----IY- 161
+ L +I+ YL+NR+F + + G YS+ S IY
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYR 711
Query: 162 -SGLRXTHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 338
S L+ +ADDT + S R + + W KW I +N K+ V+F
Sbjct: 712 PSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGHVIF 771
Query: 339 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIK 518
TL LPT ++R + + Q I K YLGV LDS++T H+
Sbjct: 772 --------TLKNDLPT--------SLRTMKIKGQVIKIESKQSYLGVILDSKLTLSSHVT 815
Query: 519 TVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 647
+ + ++ ++ RRSK+ + K+ + K+ + P+ YA
Sbjct: 816 KLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYA 858
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 60.1 bits (139), Expect = 4e-09
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 8/223 (3%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTXXXXXXXXXXXXXXXXXXXXYYSVCIST-----IY- 161
+ L +I+ YL+NR+F + + G YS+ S IY
Sbjct: 536 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYH 595
Query: 162 -SGLRXTHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 338
S L+ +ADDT + S R + T W KW I +N K+ V++
Sbjct: 596 PSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 655
Query: 339 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIK 518
TL +PT ++ + + Q I K YLGV LDS++T PH+
Sbjct: 656 --------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVT 699
Query: 519 TVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 647
V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 700 KVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 742
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.1 bits (139), Expect = 4e-09
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 8/223 (3%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTXXXXXXXXXXXXXXXXXXXXYYSVCIST-----IY- 161
+ L +I+ YL+NR+F + + G YS+ S IY
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYH 711
Query: 162 -SGLRXTHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 338
S L+ +ADDT + S R + T W KW I +N K+ V++
Sbjct: 712 PSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
Query: 339 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIK 518
TL +PT ++ + + Q I K YLGV LDS++T PH+
Sbjct: 772 --------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVT 815
Query: 519 TVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 647
V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 816 KVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.1 bits (139), Expect = 4e-09
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 8/223 (3%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTXXXXXXXXXXXXXXXXXXXXYYSVCIST-----IY- 161
+ L +I+ YL+NR+F + + G YS+ S IY
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYH 711
Query: 162 -SGLRXTHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 338
S L+ +ADDT + S R + T W KW I +N K+ V++
Sbjct: 712 PSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
Query: 339 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIK 518
TL +PT ++ + + Q I K YLGV LDS++T PH+
Sbjct: 772 --------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVT 815
Query: 519 TVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 647
V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 816 KVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 60.1 bits (139), Expect = 4e-09
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 8/223 (3%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTXXXXXXXXXXXXXXXXXXXXYYSVCIST-----IY- 161
+ L +I+ YL+NR+F + + G YS+ S IY
Sbjct: 614 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYH 673
Query: 162 -SGLRXTHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 338
S L+ +ADDT + S R + T W KW I +N K+ V++
Sbjct: 674 PSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 733
Query: 339 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIK 518
TL +PT ++ + + Q I K YLGV LDS++T PH+
Sbjct: 734 --------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVT 777
Query: 519 TVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 647
V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 778 KVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 820
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.1 bits (139), Expect = 4e-09
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 8/223 (3%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTXXXXXXXXXXXXXXXXXXXXYYSVCIST-----IY- 161
+ L +I+ YL+NR+F + + G YS+ S IY
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYH 711
Query: 162 -SGLRXTHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 338
S L+ +ADDT + S R + T W KW I +N K+ V++
Sbjct: 712 PSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
Query: 339 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIK 518
TL +PT ++ + + Q I K YLGV LDS++T PH+
Sbjct: 772 --------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVT 815
Query: 519 TVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 647
V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 816 KVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 56.4 bits (130), Expect = 4e-08
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 1/185 (0%)
Frame = +3
Query: 183 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 362
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 284 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 343
Query: 363 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 542
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 344 IYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGKTIA 387
Query: 543 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCR 719
+L +I + S + K+ L+K + P+ YA ++ K Q +++++ R
Sbjct: 388 AYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 447
Query: 720 IXVGA 734
+ A
Sbjct: 448 RIINA 452
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.4 bits (130), Expect = 4e-08
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 1/185 (0%)
Frame = +3
Query: 183 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 362
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 363 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 542
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 791 IYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGKTIA 834
Query: 543 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCR 719
+L +I + S + K+ L+K + P+ YA ++ K Q +++++ R
Sbjct: 835 AYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 894
Query: 720 IXVGA 734
+ A
Sbjct: 895 RIINA 899
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.4 bits (130), Expect = 4e-08
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 1/185 (0%)
Frame = +3
Query: 183 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 362
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 363 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 542
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 791 IYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGKTIA 834
Query: 543 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCR 719
+L +I + S + K+ L+K + P+ YA ++ K Q +++++ R
Sbjct: 835 AYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 894
Query: 720 IXVGA 734
+ A
Sbjct: 895 RIINA 899
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.4 bits (130), Expect = 4e-08
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 1/185 (0%)
Frame = +3
Query: 183 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 362
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 363 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 542
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 791 IYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGKTIA 834
Query: 543 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCR 719
+L +I + S + K+ L+K + P+ YA ++ K Q +++++ R
Sbjct: 835 AYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 894
Query: 720 IXVGA 734
+ A
Sbjct: 895 RIINA 899
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 43.2 bits (97), Expect = 4e-04
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +3
Query: 438 QPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYK 617
Q I K YLGV LDS++T H+ + + ++ ++ RRSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 618 TCIRPVMTYA 647
+ + P+ YA
Sbjct: 64 SVLSPIWQYA 73
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 39.5 bits (88), Expect = 0.005
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +3
Query: 405 APAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSK 584
AP VR + +P+ +YLG+T+ M F HI ++R R ++G L ++
Sbjct: 718 APTVR---FAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWG 774
Query: 585 MSLRNKVTLYKTCIRPVMTYASVVF 659
S R + T+Y + P + + + V+
Sbjct: 775 FSPRARRTIYDGLMAPCVLFGAPVW 799
>AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p
protein.
Length = 555
Score = 34.7 bits (76), Expect = 0.15
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 227 EEGVASSTTSDRGYHHGTVVPEVAHRHQPHEKH 325
EEGV+ T S +HH + H HQPH H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
>AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-PA
protein.
Length = 555
Score = 34.7 bits (76), Expect = 0.15
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 227 EEGVASSTTSDRGYHHGTVVPEVAHRHQPHEKH 325
EEGV+ T S +HH + H HQPH H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
>BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p
protein.
Length = 756
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +1
Query: 388 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 546
GAS PPPP Q + +P G R ++ SP+T +PT +R+ P F
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSVPGSPATA--RKSPTPQRFEPPPLGF 169
>BT004847-1|AAO45203.1| 955|Drosophila melanogaster RE70412p
protein.
Length = 955
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 361 PR*ASPSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPP 540
P AS + +S+ PPPF S++ R P R + + S +G S T Y ++ P
Sbjct: 564 PTAASTIPVPSSVATPPPFRPKVVSSTTSRTPYRPAVSTASSGIGGSSTSTVGTYPSLSP 623
Query: 541 S 543
+
Sbjct: 624 T 624
>AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p
protein.
Length = 543
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -2
Query: 635 DGAYASFVECHLISKG-HFTSPTYHRVET 552
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>AE014298-2109|AAF48429.2| 955|Drosophila melanogaster CG9095-PA
protein.
Length = 955
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 361 PR*ASPSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPP 540
P AS + +S+ PPPF S++ R P R + + S +G S T Y ++ P
Sbjct: 564 PTAASTIPVPSSVATPPPFRPKVVSSTTSRTPYRPAVSTASSGIGGSSTSTVGTYPSLSP 623
Query: 541 S 543
+
Sbjct: 624 T 624
>AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA
protein.
Length = 543
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -2
Query: 635 DGAYASFVECHLISKG-HFTSPTYHRVET 552
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 453 APKVKYLGVTLDSRMTFRPHIKTVRDRAAF---ILGRLYPMI 569
A +KYLGV +D R++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
>BT010037-1|AAQ22506.1| 409|Drosophila melanogaster LD43171p
protein.
Length = 409
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 345 GRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPK 461
G P T S P P V APA PI+ P+ +AP+
Sbjct: 280 GPAPAVTYSAPAPVPVVRYSAPAPAPISYAPAPVSYAPQ 318
>AE014298-2534|AAN09435.1| 409|Drosophila melanogaster CG32564-PA
protein.
Length = 409
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 345 GRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPK 461
G P T S P P V APA PI+ P+ +AP+
Sbjct: 280 GPAPAVTYSAPAPVPVVRYSAPAPAPISYAPAPVSYAPQ 318
>AY128472-1|AAM75065.1| 836|Drosophila melanogaster RE28238p
protein.
Length = 836
Score = 30.3 bits (65), Expect = 3.3
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 388 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 546
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 198 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 246
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 309 NPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAP 410
N + ++ +L K+ R PNT + LPT PAP
Sbjct: 301 NQSTASVMLVKKSRNPNTITNTDLPTSSTKVPAP 334
>AE014134-2320|AAN10833.1| 836|Drosophila melanogaster CG6043-PC,
isoform C protein.
Length = 836
Score = 30.3 bits (65), Expect = 3.3
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 388 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 546
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 198 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 246
>AE014134-2318|AAN10831.1| 759|Drosophila melanogaster CG6043-PB,
isoform B protein.
Length = 759
Score = 30.3 bits (65), Expect = 3.3
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 388 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 546
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 169
>AE014134-2317|AAF53274.2| 759|Drosophila melanogaster CG6043-PA,
isoform A protein.
Length = 759
Score = 30.3 bits (65), Expect = 3.3
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 388 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 546
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 169
>AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD,
isoform D protein.
Length = 918
Score = 30.3 bits (65), Expect = 3.3
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 388 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 546
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 169
>AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-PA
protein.
Length = 926
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 348 RPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIP 449
RPP + P TRR+ PAP P T ++P+P
Sbjct: 459 RPPTRPPTYPPTTRRLTTPAPTYLPPT--NKPLP 490
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 348 RPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIP 449
RPP + P TRR+ PAP P T ++P+P
Sbjct: 670 RPPTRPPTYPPTTRRLTTPAPTYLPPT--NKPLP 701
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 348 RPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIP 449
RPP + P TRR+ PAP P T ++P+P
Sbjct: 773 RPPTRPPTYPPTTRRLTTPAPTYLPPT--NKPLP 804
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 28.7 bits (61), Expect = 9.9
Identities = 19/97 (19%), Positives = 41/97 (42%)
Frame = +3
Query: 444 IPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTC 623
IP +K LG+TL+++ + HI + + L + + + + + + K
Sbjct: 731 IPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKAT 790
Query: 624 IRPVMTYASVVFAHAXRIHLKSFQIIQSRFCRIXVGA 734
I + Y ++ HA + L + + R+ +GA
Sbjct: 791 IIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGA 827
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,259,319
Number of Sequences: 53049
Number of extensions: 918848
Number of successful extensions: 3494
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 3020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3464
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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