Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_L05
(810 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 52 5e-07
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 39 0.004
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 38 0.009
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 34 0.10
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.24
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.42
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 32 0.56
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 31 1.3
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z72514-5|CAA96679.5| 818|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 6.9
AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical ... 28 6.9
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 52.0 bits (119), Expect = 5e-07
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 1/238 (0%)
Frame = +3
Query: 9 LVLIIRDYLSNRSFRYRVEGTXXXXXXXXXXXXXXXXXXXXYYSVCISTIYSGL-RXTHL 185
L++ + ++LSNRSFR R+ T + + ++ I S L
Sbjct: 46 LLIWVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKVAC 105
Query: 186 ALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTT 365
FADDT +Y S K LQ+A + W + ++ +N +K T
Sbjct: 106 KQFADDTKLYAS-TPKTESENNLQSALDAVVDWTKGSKLTLNQSK--------------T 150
Query: 366 LSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFI 545
+ + + RR++ + PI + LG + ++ F H + + A F
Sbjct: 151 VHVTVGKRRID------FKYHLDGYPIERKAITRDLGFLISEKLDFSDHWRKCINLAKFQ 204
Query: 546 LGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCR 719
L ++ +K + + LYKT IRP + Y +VV + + K+ + +Q+ F R
Sbjct: 205 LANMFNKYSTSNKKLM---ILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/93 (26%), Positives = 43/93 (46%)
Frame = +3
Query: 441 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 620
PI + LG + ++ F H K + A F L ++ +K + + LYKT
Sbjct: 140 PIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKT 196
Query: 621 CIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCR 719
IRP + Y +VV + + K+ + +Q+ F R
Sbjct: 197 FIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +3
Query: 441 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 620
PI + + LG+ DS++TF+PHIK + + L R ++ + L+KT
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKT 244
Query: 621 CIRPVMTYASVVFA 662
I P++ Y S V++
Sbjct: 245 YILPLIEYGSAVYS 258
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 34.3 bits (75), Expect = 0.10
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = +3
Query: 441 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 620
PI + V+ LG+ D ++ F HI V + + R ++ S S + LYKT
Sbjct: 969 PITPSSTVRDLGLITDCKLKFEHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKT 1025
Query: 621 CIRPVMTYASVVFA 662
+ P+M Y S V+A
Sbjct: 1026 YVAPIMNYCSEVYA 1039
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 321 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 458
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 321 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 458
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 31.9 bits (69), Expect = 0.56
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +3
Query: 366 LSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 536
++ PLP+ P VRP T FD IP+ ++G + T + R RA
Sbjct: 890 MATPLPSFN-GRPPSVVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 339 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 458
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 381 PTRRVNNPAPAVRPITMFDQPIPW 452
P R V++P +PIT+FDQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>Z72514-5|CAA96679.5| 818|Caenorhabditis elegans Hypothetical
protein T10B10.7 protein.
Length = 818
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 141 VCISTIYSGLRXTHLALFADDTA-IYYSCRKKALLHRR 251
+ +S Y GL H A+ +D +Y+ CRK A +H+R
Sbjct: 175 IFLSEEYYGLSPLHQAIVNEDLEMVYFLCRKGADVHQR 212
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 397 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 272
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical
protein Y54E10BR.5 protein.
Length = 183
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 427 VIGRTAGAGLLTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRN 284
V+GRT G LL + GM++++ P LK + F+GL + H N
Sbjct: 141 VVGRTKG--LLPYV---GMVTIIMNDYPKLKYAVLAFLGLFVLLHKEN 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,162,988
Number of Sequences: 27780
Number of extensions: 421238
Number of successful extensions: 1454
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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