Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_L04
(1016 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.57
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.57
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.3
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 1.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.3
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 30 2.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 3.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 3.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 3.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.0
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 4.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 25 5.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 25 5.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 7.0
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 7.0
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 7.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 7.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 7.0
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 7.0
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 9.3
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 28 9.3
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 28 9.3
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 9.3
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.57
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP ++ PPPPP
Sbjct: 287 PPPPPSSGMWPPPPPP 302
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 666 PDPPXXXGXXGGXXXXXXXPPPPPP 592
P PP G G PPPPPP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPP 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.57
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP ++ PPPPP
Sbjct: 297 PPPPPSSGMWPPPPPP 312
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 666 PDPPXXXGXXGGXXXXXXXPPPPPP 592
P PP G G PPPPPP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPP 332
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 411 PPPPPXKXFCXXPPPP 458
PPPPP C PPPP
Sbjct: 65 PPPPPPPPMCPPPPPP 80
Score = 30.7 bits (66), Expect = 1.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP + PPPPP
Sbjct: 65 PPPPPPPPMCPPPPPP 80
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP PPPPP
Sbjct: 64 PPPPPPPPPMCPPPPP 79
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP L PPPPP
Sbjct: 87 PPPPPPPTLKAPPPPP 102
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP L PPPPP
Sbjct: 578 PPPPPPPMLGGPPPPP 593
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPPXXKKKK 478
PPPPP PPPPP +KKK
Sbjct: 817 PPPPPP----LPPPPPSVEKKK 834
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPPXXKKKK 478
PPPPP PPPPP +KKK
Sbjct: 817 PPPPPP----LPPPPPSVEKKK 834
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 3.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 411 PPPPPXKXFCXXPPPP 458
PPPPP C PPPP
Sbjct: 759 PPPPPPPGGCPPPPPP 774
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP PPPPP
Sbjct: 759 PPPPPPPGGCPPPPPP 774
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP PPPPP
Sbjct: 760 PPPPPPGGCPPPPPPP 775
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 411 PPPPPXKXFCXXPPPP 458
PPPPP F PPPP
Sbjct: 772 PPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP PPPPP
Sbjct: 773 PPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 3.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 411 PPPPPXKXFCXXPPPP 458
PPPPP C PPPP
Sbjct: 759 PPPPPPPGGCPPPPPP 774
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP PPPPP
Sbjct: 759 PPPPPPPGGCPPPPPP 774
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP PPPPP
Sbjct: 760 PPPPPPGGCPPPPPPP 775
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 411 PPPPPXKXFCXXPPPP 458
PPPPP F PPPP
Sbjct: 772 PPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP PPPPP
Sbjct: 773 PPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 3.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 411 PPPPPXKXFCXXPPPP 458
PPPPP C PPPP
Sbjct: 342 PPPPPPPGGCPPPPPP 357
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP PPPPP
Sbjct: 342 PPPPPPPGGCPPPPPP 357
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP PPPPP
Sbjct: 343 PPPPPPGGCPPPPPPP 358
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 411 PPPPPXKXFCXXPPPP 458
PPPPP F PPPP
Sbjct: 355 PPPPPPGGFKGGPPPP 370
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP PPPPP
Sbjct: 356 PPPPPGGFKGGPPPPP 371
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPP 457
PPPPP F PPPP
Sbjct: 55 PPPPPCPAQFCPPPP 69
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 411 PPPPPXKXFCXXPPPP 458
PPPPP C PPPP
Sbjct: 72 PPPPPPPMPCPPPPPP 87
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP PPPPP
Sbjct: 72 PPPPPPPMPCPPPPPP 87
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP PPPPP
Sbjct: 95 PPPPPPHYYTQPPPPP 110
Score = 28.3 bits (60), Expect = 9.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 411 PPPPPXKXFCXXPPPP 458
PPPPP + PPPP
Sbjct: 95 PPPPPPHYYTQPPPPP 110
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 24.6 bits (51), Expect(2) = 5.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 593 GGGGGGXXXXXXXPPXXPXXXGGSGXG 673
GGGGGG P GG G G
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGG 86
Score = 22.6 bits (46), Expect(2) = 5.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 575 FFXPXXGGGGGG 610
F P GGGGGG
Sbjct: 20 FLFPSAGGGGGG 31
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 24.6 bits (51), Expect(2) = 5.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 593 GGGGGGXXXXXXXPPXXPXXXGGSGXG 673
GGGGGG P GG G G
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGG 86
Score = 22.6 bits (46), Expect(2) = 5.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 575 FFXPXXGGGGGG 610
F P GGGGGG
Sbjct: 20 FLFPSAGGGGGG 31
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 596 GGGGGXXXXXXXPPXXPXXXGGSGXG 673
GGGGG PP P GG G G
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGG 68
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 596 GGGGGXXXXXXXPPXXPXXXGGSGXG 673
GGGGG PP P GG G G
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGG 125
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPPXXKKKK 478
PPPPP PPPPP ++++
Sbjct: 134 PPPPPSPPPPPPPPPPQLQQQQ 155
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP PPPPP
Sbjct: 41 PPPPPMCGCAPPPPPP 56
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP K PPP P
Sbjct: 91 PPPPPPKPTIRPPPIP 106
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 413 PPPPPXKXLFXPPPPP 460
PPPPP K PPP P
Sbjct: 313 PPPPPPKPTIRPPPIP 328
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 416 PPPPXKXLFXPPPPP 460
PPPP K PPPPP
Sbjct: 33 PPPPPKGTGTPPPPP 47
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 416 PPPPXKXLFXPPPPP 460
PPPP K PPPPP
Sbjct: 64 PPPPPKGTGTPPPPP 78
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 416 PPPPXKXLFXPPPPP 460
PPPP K PPPPP
Sbjct: 96 PPPPPKGTGTPPPPP 110
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 416 PPPPXKXLFXPPPPP 460
PPPP K PPPPP
Sbjct: 127 PPPPPKGTGSPPPPP 141
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 416 PPPPXKXLFXPPPPP 460
PPPP K PPPPP
Sbjct: 158 PPPPPKGTGSPPPPP 172
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 416 PPPPXKXLFXPPPPP 460
PPPP K PPPPP
Sbjct: 189 PPPPPKGTGTPPPPP 203
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 416 PPPPXKXLFXPPPPP 460
PPPP K PPPPP
Sbjct: 251 PPPPPKGTGSPPPPP 265
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 9.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 416 PPPPXKXLFXPPPPP 460
PPPP + PPPPP
Sbjct: 790 PPPPPLGIIPPPPPP 804
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 416 PPPPXKXLFXPPPPP 460
PPPP K PPPPP
Sbjct: 298 PPPPIKEESPPPPPP 312
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 416 PPPPXKXLFXPPPPP 460
PPPP K PPPPP
Sbjct: 298 PPPPIKEESPPPPPP 312
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 9.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 416 PPPPXKXLFXPPPPP 460
PPPP + PPPPP
Sbjct: 790 PPPPPLGIIPPPPPP 804
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,732,099
Number of Sequences: 27780
Number of extensions: 196402
Number of successful extensions: 2444
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2012
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2678332928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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